mRNA_P-wetherbeei_contig1534.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: A0A7R9WCD3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WCD3_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 8.040e-23 Identity = 38/55 (69.09%), Postives = 52/55 (94.55%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFIS 165
+R+AFAAL + KPHV+I DEPTNHLDM++IDAL+EA+++FKGG+VVVSHDQ+F++
Sbjct: 34 SRIAFAALAYQKPHVIIFDEPTNHLDMESIDALVEAVKDFKGGIVVVSHDQYFVT 88
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: A0A482RY60_9ARCH (ABC-F family ATP-binding cassette domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY60_9ARCH) HSP 1 Score: 90.9 bits (224), Expect = 2.920e-22 Identity = 40/56 (71.43%), Postives = 49/56 (87.50%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFISQ 168
+R AFA L F KPHVVIMDEPTNHLDM I+ALI+A++NF GGV+++SHDQHFI+Q
Sbjct: 24 SRAAFALLTFQKPHVVIMDEPTNHLDMGAIEALIDALKNFHGGVLIISHDQHFINQ 79
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: A0A7S2UP03_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UP03_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.300e-21 Identity = 39/55 (70.91%), Postives = 52/55 (94.55%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFIS 165
+RVAFA+L F +PHV+IMDEPTNHLDM++IDAL+EAI++F+GG++VVSHDQ FI+
Sbjct: 46 SRVAFASLAFQQPHVIIMDEPTNHLDMESIDALVEAIKDFRGGLMVVSHDQFFIT 100
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: A0A7S2SHV6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SHV6_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.700e-21 Identity = 41/56 (73.21%), Postives = 53/56 (94.64%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFISQ 168
+RVAFAAL + KPHV+IMDEPTNHLDM++IDAL+EA++N+KGG+V VSHDQ+FI+Q
Sbjct: 320 SRVAFAALAYQKPHVIIMDEPTNHLDMESIDALVEALQNYKGGLVCVSHDQYFITQ 375
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: A0A836CKX3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX3_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.810e-21 Identity = 42/56 (75.00%), Postives = 51/56 (91.07%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFISQ 168
+RVAFAAL ++ PHV+IMDEPTNHLDM+TI+ALI+A+R FKG V+ VSHDQHFISQ
Sbjct: 643 SRVAFAALAYSNPHVIIMDEPTNHLDMETINALIQALREFKGAVICVSHDQHFISQ 698
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: K0TIP2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIP2_THAOC) HSP 1 Score: 94.4 bits (233), Expect = 3.850e-21 Identity = 39/55 (70.91%), Postives = 53/55 (96.36%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFIS 165
+RVAFA+L + KPHV+IMDEPTNHLDM++IDAL+EA+++F+GG++VVSHDQHFI+
Sbjct: 680 SRVAFASLAYQKPHVIIMDEPTNHLDMESIDALVEAVKDFRGGLIVVSHDQHFIT 734
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: A0A7S0FMR8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMR8_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 4.300e-21 Identity = 35/55 (63.64%), Postives = 51/55 (92.73%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFIS 165
+RVAFAAL + KPHV++ DEP+NHLDM++IDAL+ A+++++GG+VVVSHD+HF+S
Sbjct: 13 SRVAFAALAYQKPHVIVFDEPSNHLDMESIDALVGAVKDYRGGIVVVSHDEHFMS 67
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: A0A7S2R4V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4V8_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.490e-20 Identity = 37/56 (66.07%), Postives = 52/56 (92.86%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFISQ 168
+RV FAAL +++PH+++MDEPTNHLD+ TIDALI A+R+F+GGV++VSHDQHFI++
Sbjct: 645 SRVVFAALAYSRPHIIVMDEPTNHLDIQTIDALIHAVRDFRGGVILVSHDQHFINK 700
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: A0A7S0SWF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWF2_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.070e-20 Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFIS 165
+RVAFA L + KPHVVI+DEPTNHLDM+ I+ALI A++ F GGV+VVSHDQHFI+
Sbjct: 88 SRVAFACLTYTKPHVVILDEPTNHLDMNAIEALINALKKFTGGVLVVSHDQHFIT 142
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Match: A0A2P4X5V2_9STRA (ABCF/EF-3b transporter-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X5V2_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 4.020e-20 Identity = 37/55 (67.27%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 1 NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDQHFIS 165
+RV FA + + PHVV++DEPTNHLDM+TIDALI+A+R +KGGVV+VSHDQHF++
Sbjct: 121 SRVGFALMTWRLPHVVVLDEPTNHLDMETIDALIDALREYKGGVVIVSHDQHFVT 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1534.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1534.2.1 >prot_P-wetherbeei_contig1534.2.1 ID=prot_P-wetherbeei_contig1534.2.1|Name=mRNA_P-wetherbeei_contig1534.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=59bp NRVAFAALGFAKPHVVIMDEPTNHLDMDTIDALIEAIRNFKGGVVVVSHDback to top mRNA from alignment at P-wetherbeei_contig1534:6635..6811- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1534.2.1 ID=mRNA_P-wetherbeei_contig1534.2.1|Name=mRNA_P-wetherbeei_contig1534.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig1534:6635..6811- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1534:6635..6811- >mRNA_P-wetherbeei_contig1534.2.1 ID=mRNA_P-wetherbeei_contig1534.2.1|Name=mRNA_P-wetherbeei_contig1534.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig1534:6635..6811- (Phaeothamnion wetherbeei SAG_119_79)back to top |