mRNA_P-wetherbeei_contig15073.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15073.1.1
Unique NamemRNA_P-wetherbeei_contig15073.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: E1ZLU3_CHLVA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLU3_CHLVA)

HSP 1 Score: 120 bits (300), Expect = 4.910e-30
Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 1 
Query:    1 QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQAGP--GATVVGRCGF 276
            Q++A GKSLA M+A+GWR  E+EV RIA ELL VL YLG  RPPV+HRD+KP++IV+EGG +GGRVFL DFGGVQ  A AG   G+T+VG  G+
Sbjct:  187 QEVAQGKSLADMVASGWRADEAEVTRIAVELLGVLEYLGSRRPPVIHRDVKPDNIVIEGGKTGGRVFLVDFGGVQAAAAAGDSLGSTIVGTYGY 280
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: A0A8J4F120_9CHLO (Protein kinase domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F120_9CHLO)

HSP 1 Score: 117 bits (293), Expect = 1.120e-28
Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 1 
Query:    1 QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQAGP----GATVVGRCGF 276
            Q++  GKSLA M+ +G R  E EV+RIA E LSVL YLG LRPPV+HRD+KPE+IVLEGG  GGRV+L DFGGVQ +A AG     G+T+VG  G+
Sbjct:  197 QEVVRGKSLASMIQSGQRATEQEVIRIAEETLSVLEYLGSLRPPVIHRDVKPENIVLEGGQWGGRVYLVDFGGVQAVASAGELSGLGSTIVGTYGY 292
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: D8TQB4_VOLCA (Protein kinase domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQB4_VOLCA)

HSP 1 Score: 117 bits (292), Expect = 1.690e-28
Identity = 58/96 (60.42%), Postives = 73/96 (76.04%), Query Frame = 1 
Query:    1 QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQAGP----GATVVGRCGF 276
            Q++  GKSLA M+ +G R  E EV+RIA E+LSVL YLG LRPPV+HRD+KP++I+LEGG  GGRVFL DFGGVQ +A AG     G+T+VG  G+
Sbjct:  336 QEVVRGKSLAAMIQSGQRATEQEVIRIAGEMLSVLEYLGTLRPPVIHRDVKPDNIILEGGQWGGRVFLVDFGGVQAVASAGELSGLGSTIVGTYGY 431
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: A0A8J4CNG4_9CHLO (Protein kinase domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CNG4_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 2.070e-28
Identity = 58/96 (60.42%), Postives = 72/96 (75.00%), Query Frame = 1 
Query:    1 QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQAGP----GATVVGRCGF 276
            Q++  GKSLA M+ +G R  E EV+RI  E+LSVL YLG LRPPV+HRD+KPE+I+LEGG  GGRVFL DFGGVQ +A AG     G+T+VG  G+
Sbjct:  189 QEVVRGKSLAAMIQSGKRATEQEVIRIGGEMLSVLEYLGSLRPPVIHRDVKPENIILEGGQWGGRVFLVDFGGVQAVASAGELSGLGSTIVGTYGY 284
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: D7FQZ9_ECTSI (Protein kinase domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQZ9_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 3.990e-28
Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 1 
Query:    1 QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQAGPGATVVGRCGF 276
            QQLA G++L  M+  GWRP E+EV RIA  +L +L YL  LRP +VHRD+KPE+IV+EGG SGGRVFL DFGGVQG     P +TV+G  G+
Sbjct:   47 QQLAPGRTLEQMVEDGWRPTEAEVRRIAERVLEILVYLHGLRPAIVHRDLKPENIVIEGGSSGGRVFLVDFGGVQGAVTDKPSSTVIGTYGY 138
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: A0A2P6TZY7_CHLSO (Serine threonine kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TZY7_CHLSO)

HSP 1 Score: 115 bits (289), Expect = 4.200e-28
Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 1 
Query:    1 QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQ--AGP-GATVVGRCGF 276
            Q+LA GKSLA ++A+GWR  E+EV RIA ELL +L YLG  RPPV+HRD+KP++IVLEGG +GGRV+L DFGGVQ  A   A P G+T+VG  G+
Sbjct:  181 QELAQGKSLADLVASGWRADEAEVTRIALELLDILGYLGSRRPPVIHRDVKPDNIVLEGGRTGGRVYLVDFGGVQAAAATAADPLGSTIVGTYGY 275
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: A0A2P6VRP1_9CHLO (Serine threonine kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRP1_9CHLO)

HSP 1 Score: 113 bits (283), Expect = 2.820e-27
Identity = 58/95 (61.05%), Postives = 69/95 (72.63%), Query Frame = 1 
Query:    1 QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQAGP---GATVVGRCGF 276
            Q+ A GKSLA M+ +GWR  E+EV RIA ELL VL YLG  RPPV HRD+KPE+IV+EGG +GGRVFL DFGGVQ  A       G+T+VG  G+
Sbjct:  177 QEAAQGKSLAEMVRSGWRADEAEVTRIATELLQVLQYLGSRRPPVAHRDVKPENIVIEGGRTGGRVFLVDFGGVQAAATTAEDTLGSTIVGTYGY 271
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: A0A835WKB7_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WKB7_9CHLO)

HSP 1 Score: 112 bits (280), Expect = 6.610e-27
Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 1 
Query:    1 QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQA----GPGATVVGRCGF 276
            Q++  GKSLA ML +G R  E EV+RIA E+LSVL YL  L+PPV+HRD+KP++I+LEGG  GGRV+L DFGGVQ +A A    G G+T+VG  G+
Sbjct:  203 QEVVRGKSLADMLRSGQRATEQEVVRIAGEMLSVLEYLSSLKPPVIHRDVKPDNIILEGGAWGGRVYLVDFGGVQAVANAAELSGIGSTIVGTFGY 298
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: A8HN04_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HN04_CHLRE)

HSP 1 Score: 111 bits (278), Expect = 9.180e-27
Identity = 55/96 (57.29%), Postives = 71/96 (73.96%), Query Frame = 1 
Query:    1 QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQAGP----GATVVGRCGF 276
            Q++  G+SLA ML AG R  E EV+RIA E+L VL YL  LRPPV+HRD+KP++I++EGG  GGRV+L DFGGVQ +A AG     G+T+VG  G+
Sbjct:  109 QEVVRGRSLADMLRAGQRATEQEVVRIAGEMLGVLEYLSSLRPPVIHRDVKPDNIIVEGGAWGGRVYLVDFGGVQAVANAGELSGLGSTIVGTFGY 204
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BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Match: A0A7J7QG20_9CHLO (Kinase-like domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QG20_9CHLO)

HSP 1 Score: 111 bits (278), Expect = 1.120e-26
Identity = 56/94 (59.57%), Postives = 73/94 (77.66%), Query Frame = 1 
Query:    4 QLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDIKPESIVLEGGLSGGRVFLTDFGGVQGIAQAGP---GATVVGRCGF 276
            ++  GKSLA M+++G R  ES+V+RIA+ELL+ L YL  LRPPV+HRDIKPE++VLEGG  GGRV+L DFGGVQG+A A     G+T+VG  G+
Sbjct:  141 EVVQGKSLAQMVSSGMRADESQVMRIAQELLATLKYLAGLRPPVIHRDIKPENVVLEGGKWGGRVYLIDFGGVQGVANAAEFSLGSTIVGTYGY 234
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15073.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E1ZLU3_CHLVA4.910e-3063.83Protein kinase domain-containing protein (Fragment... [more]
A0A8J4F120_9CHLO1.120e-2861.46Protein kinase domain-containing protein n=1 Tax=V... [more]
D8TQB4_VOLCA1.690e-2860.42Protein kinase domain-containing protein n=1 Tax=V... [more]
A0A8J4CNG4_9CHLO2.070e-2860.42Protein kinase domain-containing protein n=1 Tax=V... [more]
D7FQZ9_ECTSI3.990e-2859.78Protein kinase domain n=1 Tax=Ectocarpus siliculos... [more]
A0A2P6TZY7_CHLSO4.200e-2862.11Serine threonine kinase n=1 Tax=Chlorella sorokini... [more]
A0A2P6VRP1_9CHLO2.820e-2761.05Serine threonine kinase n=1 Tax=Micractinium condu... [more]
A0A835WKB7_9CHLO6.610e-2758.33Protein kinase domain-containing protein n=1 Tax=C... [more]
A8HN04_CHLRE9.180e-2757.29Predicted protein n=1 Tax=Chlamydomonas reinhardti... [more]
A0A7J7QG20_9CHLO1.120e-2659.57Kinase-like domain-containing protein n=1 Tax=Scen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15073contigP-wetherbeei_contig15073:194..812 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog554065.XP_005845299.1
Preferred nameCLA4
PFAMsPBD,PH,Pkinase
Model size279
Max annot lvl2759|Eukaryota
KEGG koko:K08286,ko:K19833
KEGG Pathwayko04011,map04011
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000011,GO:0000122,GO:0000165,GO:0000166,GO:0000322,GO:0000323,GO:0000324,GO:0000920,GO:0001410,GO:0001932,GO:0001934,GO:0002831,GO:0002833,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005886,GO:0005933,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006869,GO:0006950,GO:0006996,GO:0007010,GO:0007033,GO:0007088,GO:0007096,GO:0007154,GO:0007163,GO:0007165,GO:0007264,GO:0007265,GO:0007266,GO:0007346,GO:0008144,GO:0008150,GO:0008152,GO:0009267,GO:0009405,GO:0009605,GO:0009607,GO:0009653,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010564,GO:0010570,GO:0010604,GO:0010605,GO:0010629,GO:0010646,GO:0010876,GO:0010941,GO:0015850,GO:0015918,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017048,GO:0017076,GO:0019219,GO:0019220,GO:0019222,GO:0019236,GO:0019538,GO:0019899,GO:0019954,GO:0023014,GO:0023051,GO:0023052,GO:0030029,GO:0030036,GO:0030154,GO:0030435,GO:0030436,GO:0030447,GO:0030554,GO:0031098,GO:0031106,GO:0031267,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031401,GO:0031667,GO:0031668,GO:0031669,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032147,GO:0032185,GO:0032268,GO:0032270,GO:0032368,GO:0032369,GO:0032371,GO:0032372,GO:0032386,GO:0032388,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0033036,GO:0033043,GO:0033157,GO:0033554,GO:0033674,GO:0035376,GO:0035556,GO:0035639,GO:0035690,GO:0035968,GO:0036094,GO:0036170,GO:0036180,GO:0036211,GO:0040007,GO:0040008,GO:0042221,GO:0042306,GO:0042307,GO:0042325,GO:0042327,GO:0042493,GO:0042594,GO:0042981,GO:0043067,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043412,GO:0043549,GO:0043934,GO:0043936,GO:0044093,GO:0044111,GO:0044114,GO:0044115,GO:0044182,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045859,GO:0045860,GO:0045892,GO:0045927,GO:0045934,GO:0045937,GO:0046822,GO:0046824,GO:0048308,GO:0048365,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051301,GO:0051338,GO:0051347,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0060255,GO:0060341,GO:0065007,GO:0065009,GO:0070201,GO:0070887,GO:0071496,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0072367,GO:0072368,GO:0080090,GO:0080134,GO:0090033,GO:0090087,GO:0090316,GO:0097159,GO:0097367,GO:0140096,GO:1900180,GO:1900182,GO:1900428,GO:1900430,GO:1900434,GO:1900436,GO:1900443,GO:1900445,GO:1901265,GO:1901363,GO:1901564,GO:1901987,GO:1901990,GO:1902531,GO:1902679,GO:1903506,GO:1903507,GO:1903827,GO:1903829,GO:1904589,GO:1904591,GO:1904951,GO:1905952,GO:1905953,GO:1990872,GO:2000112,GO:2000113,GO:2000909,GO:2000910,GO:2001141
Exons2
Evalue8.05e-31
EggNOG OGsKOG0578@1|root,KOG0578@2759|Eukaryota
EC2.7.11.1
DescriptionRac GTPase binding
Cds size279
COG categoryF
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186043.7835293-CDS-P-wetherbeei_contig15073:193..3521683186043.7835293-CDS-P-wetherbeei_contig15073:193..352Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15073 194..352 +
1683186043.8005464-CDS-P-wetherbeei_contig15073:692..8121683186043.8005464-CDS-P-wetherbeei_contig15073:692..812Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15073 693..812 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15073.1.1prot_P-wetherbeei_contig15073.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15073 194..812 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15073.1.1

>prot_P-wetherbeei_contig15073.1.1 ID=prot_P-wetherbeei_contig15073.1.1|Name=mRNA_P-wetherbeei_contig15073.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp
QQLAVGKSLAGMLAAGWRPLESEVLRIARELLSVLAYLGQLRPPVVHRDI
KPESIVLEGGLSGGRVFLTDFGGVQGIAQAGPGATVVGRCGF*
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mRNA from alignment at P-wetherbeei_contig15073:194..812+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15073.1.1 ID=mRNA_P-wetherbeei_contig15073.1.1|Name=mRNA_P-wetherbeei_contig15073.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=619bp|location=Sequence derived from alignment at P-wetherbeei_contig15073:194..812+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCAGCTGGCGGTGGGCAAGTCGCTGGCCGGCATGCTCGCGGCCGGCTG
GCGTCCTCTCGAGTCCGAGGTGCTCCGGATCGCCCGCGAGCTGCTGAGCG
TTCTGGCGTACTTGGGGCAGCTGCGACCGCCCGTCGTCCACCGCGACATC
AAGCCTGAGGTGTGCTGTATGGATATGGATCTAACTGGATAGACAAGGAT
CCTTTTCTTGTCAGTAAGTTTAGTTATATAGGCGGAAGGGACTGCGTGGG
CAAAGGTTACTTGGTCCTATTCTGCTCCACTGTGGCCGCCACTTGCCGAC
AGCTTCAGGCGTCGATTTTACCGGTGCAAACTGCTCTTTTCCTCTCTTCG
CTAGTTCTTGTCTCGACATACCCTTTTCCCGACTCTTTCTCTCATGTCGT
AATCAAAGCGTCCTTCCTCGTAGCTTGGTAACCAAACTGCCTCGTCGGTC
AGTCCGGCCTTCCTGACACGCCCGTGCCTTTCCATATTTGCCCCATCAGA
GCATCGTGCTAGAAGGCGGCCTCTCTGGCGGGCGCGTTTTTCTGACGGAC
TTCGGGGGCGTGCAGGGCATCGCACAGGCCGGCCCCGGCGCCACCGTCGT
CGGCAGGTGCGGCTTTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15073:194..812+

>mRNA_P-wetherbeei_contig15073.1.1 ID=mRNA_P-wetherbeei_contig15073.1.1|Name=mRNA_P-wetherbeei_contig15073.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig15073:194..812+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCAGCTGGCGGTGGGCAAGTCGCTGGCCGGCATGCTCGCGGCCGGCTG
GCGTCCTCTCGAGTCCGAGGTGCTCCGGATCGCCCGCGAGCTGCTGAGCG
TTCTGGCGTACTTGGGGCAGCTGCGACCGCCCGTCGTCCACCGCGACATC
AAGCCTGAGAGCATCGTGCTAGAAGGCGGCCTCTCTGGCGGGCGCGTTTT
TCTGACGGACTTCGGGGGCGTGCAGGGCATCGCACAGGCCGGCCCCGGCG
CCACCGTCGTCGGCAGGTGCGGCTTTTGA
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