mRNA_P-wetherbeei_contig15030.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: A0A6H5JCR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR2_9PHAE) HSP 1 Score: 228 bits (582), Expect = 1.200e-65 Identity = 112/205 (54.63%), Postives = 155/205 (75.61%), Query Frame = 1
Query: 1 RGRDRG-KALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAVPAKIARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGLGETLRGVEGRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFLRQPDQVEAVDVGEVNADDLDRDMLARRARIAGLVTEGLSAMELLRRLTHLNAF 612
R +D+G + L DK+F+ FS LLR LT R + +AM FALDHADA+ +V +L++SLLVPET + KIARLYLLSD+LHNSS PV+ A+ YR HLQ LPEIF+GL E RGVEGR+T++Q+ +R++ LL W+ WS+YPPL++ GLEA+F+R+ +EA D+ V LD++ LA++A AG+ TEGLSA++LL+RL +LN +
Sbjct: 628 REQDKGAEELSDKDFDAFSALLRGLTNSRAKVKEAMGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRIMALLAAWDNWSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLSALDLLKRLNYLNEY 832
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: D7FSA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA5_ECTSI) HSP 1 Score: 196 bits (497), Expect = 3.090e-54 Identity = 103/205 (50.24%), Postives = 143/205 (69.76%), Query Frame = 1
Query: 1 RGRDRG-KALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAVPAKIARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGLGETLRGVEGRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFLRQPDQVEAVDVGEVNADDLDRDMLARRARIAGLVTEGLSAMELLRRLTHLNAF 612
R +D+G + L DK+F+ FS LLR LT + AD V +L++SLLVPET + KIARLYLLSD+LHNSS PV+ A+ YR HLQ LPEIF+GL E RGVEGR+T++Q+ +R++ LL W+ WS+YPPL++ GLEA+F+R+ +EA D+ V LD++ LA++A AG+ TEGLSA++LL+RL +LN +
Sbjct: 727 REQDKGAQELSDKDFDAFSALLRGLT--------------NSAD----VVGVLKESLLVPETPIHVKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRIMALLAAWDNWSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLSALDLLKRLNYLNEY 913
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: A0A7S3UX26_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX26_HETAK) HSP 1 Score: 187 bits (476), Expect = 3.740e-53 Identity = 103/207 (49.76%), Postives = 139/207 (67.15%), Query Frame = 1
Query: 1 RGRDRGKALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAVPAKIARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGL--GETLRGVEGRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFLRQPDQVEAVDVGEVNADDLDRDMLARRARIAGL-VTEGLSAMELLRRLTHLNAF 612
RGR AL D E++Q S++LR LT RR I +AM FALDHADA+ EV LL +SL + T P K+ARL+LLSD+LHNSS PVR AA YR LQ ALP++F+ L +GR++++ +V+ +LGVWE WSLYPPLF++GLEATF R+ + ++ V DLDR L ++A+ AGL T+ A+ LL++LTHLN +
Sbjct: 326 RGRAAKTALTDDEYDQLSDMLRGLTNSRRKIKEAMGFALDHADASEEVVQLLAESLGLKATPAPVKVARLHLLSDILHNSSAPVRHAASYRTRLQDALPQVFDALRLAREAEEAKGRMSAQSFESKVMRVLGVWEGWSLYPPLFISGLEATFRRRQEDLDRAKPEGVAEADLDRPGLEKKAKQAGLHFTDADGALLLLQKLTHLNKY 532
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: A0A836CAC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC0_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.310e-49 Identity = 105/221 (47.51%), Postives = 145/221 (65.61%), Query Frame = 1
Query: 7 RDRGKALG---DKEFEQFSELLRELTL-GRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAV----PAK------IARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGLGETLRGVEGRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFLRQPDQVEAVD----VGEVNADDLDRDMLARRARIAGL-VTEGLSAMELLRRLTHLNAF 612
R+RG +G E + F ELL LT+ RR I +AM ALD+++ + V ++L +SL+ + PA +ARLYL+SDVLHNS+ PVR A +R LQ+ LP++FE LG LRG+ GRLT+RQ+RERV+ LL VW WS+YPPLFL GLEA+ +R P + AV+ G+V +D+DR L R+AR AGL V++ +SA++L RL HLNA+
Sbjct: 525 RERGGPVGRMPQPEEDNFRELLGRLTMPSRRLIREAMGAALDNSECSAHVVEILSESLMEAGRIISEDGPAPXXXXVIVARLYLVSDVLHNSAAPVRNATSFRTLLQSCLPQVFEALGTALRGIAGRLTARQLRERVLALLAVWSDWSIYPPLFLTGLEASLMRAPADMAAVEGATAAGDVREEDMDRAALERKARQAGLHVSDAMSALDLFNRLNHLNAY 745
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: A0A7S2WJA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJA8_9STRA) HSP 1 Score: 171 bits (432), Expect = 6.240e-46 Identity = 97/206 (47.09%), Postives = 138/206 (66.99%), Query Frame = 1
Query: 16 GKALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAVPAKIARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGLGETLRGVE--GRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFLRQPDQVEAVDVGEVNAD---DLDRDMLARRARIAGLVTEGLS--AMELLRRLTHLNAF 612
G +L + E+++ + L+ L+ R++I +AM FALDHA+A+ EV LL++SLL+ ET + K+ARLYLLSD+LHNSS PV+ A+ YR LQA LP+IFE L R VE GR+++R + E+V+ LLGVWEQWSLYPP ++ GLEATF R+ +EA G + D LD + L R+A+ G+ + + A LL +L LN +
Sbjct: 524 GGSLANHEYDELQDRLQTLSTSRQTIKEAMGFALDHAEASQEVVKLLKESLLLGETPISVKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEKVLALLGVWEQWSLYPPTYITGLEATFERRAGALEA---GLQDVDPKASLDLEDLKRKAKHTGVFFDDSNDTAAHLLVKLNLLNEY 726
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: A0A7S2WJ81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJ81_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.470e-45 Identity = 97/206 (47.09%), Postives = 138/206 (66.99%), Query Frame = 1
Query: 16 GKALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAVPAKIARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGLGETLRGVE--GRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFLRQPDQVEAVDVGEVNAD---DLDRDMLARRARIAGLVTEGLS--AMELLRRLTHLNAF 612
G +L + E+++ + L+ L+ R++I +AM FALDHA+A+ EV LL++SLL+ ET + K+ARLYLLSD+LHNSS PV+ A+ YR LQA LP+IFE L R VE GR+++R + E+V+ LLGVWEQWSLYPP ++ GLEATF R+ +EA G + D LD + L R+A+ G+ + + A LL +L LN +
Sbjct: 524 GGSLANHEYDELQDRLQTLSTSRQTIKEAMGFALDHAEASQEVVKLLKESLLLGETPISVKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEKVLALLGVWEQWSLYPPTYITGLEATFERRAGALEA---GLQDVDPKASLDLEDLKRKAKHTGVFFDDSNDTAAHLLVKLNLLNEY 726
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: A0A5J4Y8I8_9CHLO (U2 snRNP-associated SURP motif-containing-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y8I8_9CHLO) HSP 1 Score: 162 bits (409), Expect = 1.900e-42 Identity = 86/198 (43.43%), Postives = 124/198 (62.63%), Query Frame = 1
Query: 7 RDRGKALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAVPAKIARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGLGETLRGVEGRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFLRQPDQVE----AVDVGEVNADDLDRDMLARRARIAGLVTEGLSAMELLR 588
+D+ K L D + ++F +LLR LT+ R+ I DAM FALD+AD+A E+ ++L D+L + ET +P K+ARL+L DVLHNS+ PVR A+RYR+H++ +LP+IFE L ET R E R+T +R V+ +L +W WS++ FL GL+ATFLR + V + L D L R R GL +G M++ R
Sbjct: 305 KDKDKPLSDTQRDRFEDLLRSLTVERKDICDAMIFALDNADSAFEIVEILTDALTLSETPIPTKVARLFLTCDVLHNSTAPVRNASRYRSHMETSLPDIFESLQETYRACESRMTQEGLRRHVLRVLRMWRTWSIFSDDFLNGLQATFLRGASALSNRKAENPVLAAELEQLQDDQLDTRCRRNGLSKKGGRDMQVQR 502
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: A0A7R9VA67_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VA67_9CHLO) HSP 1 Score: 157 bits (398), Expect = 1.110e-41 Identity = 79/150 (52.67%), Postives = 108/150 (72.00%), Query Frame = 1
Query: 4 GRDRGKALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAVPAKIARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGLGETLRGVEGRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFL 453
G DR +AL + E ++F ELLR LT+ R I +AM FALD+ADA EV D+L +SL + ET VP KIARL+L++DVLHN++ PVRGA+RYR+ L+AALP +FE L E RG+E R+T +R V+ +L W + ++ +LAGL+ATFL
Sbjct: 443 GLDRDRALSELERDRFEELLRRLTVEREHICEAMVFALDNADACGEVVDILAESLSLAETPVPIKIARLFLVNDVLHNATAPVRGASRYRSKLEAALPHVFESLQECYRGIETRITQEALRRHVLRVLRAWREHFIFSDDYLAGLQATFL 592
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: A0A061SIL3_9CHLO (U2 snrnp-associated surp motif-containing n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SIL3_9CHLO) HSP 1 Score: 148 bits (373), Expect = 4.200e-41 Identity = 79/191 (41.36%), Postives = 117/191 (61.26%), Query Frame = 1
Query: 10 DRGKALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAVPAKIARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGLGETLRGVEGRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFLRQPDQVEAVDVGEVNAD------DLDRDMLARRARIAGLVTEG 564
D K L + + ++F ++LR +TL R SI +AMAF LD+AD+A E+ ++L ++L +PET K+ARL+L+SDVLHNS+ PV+ A+ +R LQ ++P+IFE L E R + R+T +R ++ +L VW W ++ FL GL+ATFL Q A D N + L + L RR R +GL T G
Sbjct: 7 DXSKPLSETQRDRFEDMLRGITLERESIREAMAFCLDNADSAQEIVEILTEALTLPETPAVLKVARLFLVSDVLHNSTAPVKNASNFRTRLQESMPDIFESLSECYRACDSRITQETLRRYILRVLRVWRGWYIFSDDFLNGLQATFLYIGSQ--AADSAPSNEELVEELGGLSDESLERRCRFSGLSTSG 195
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Match: A0A8J9SQ62_9CHLO (U2 snRNP-associated SURP motif-containing protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SQ62_9CHLO) HSP 1 Score: 157 bits (396), Expect = 1.110e-40 Identity = 88/189 (46.56%), Postives = 119/189 (62.96%), Query Frame = 1
Query: 7 RDRGKALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADLLRDSLLVPETAVPAKIARLYLLSDVLHNSSTPVRGAARYRNHLQAALPEIFEGLGETLRGVEGRLTSRQMRERVVGLLGVWEQWSLYPPLFLAGLEATFLRQPDQ---VEAVDVGEVNADDLDRDMLARRARIAGLVTEG 564
+D+ + L D + ++F +LLR +T+ R I +AM FALD+A++A EVA+ L D+L + ET VP K+ARL L+SDVLHNS+ PVR A+RYR+ L+A LP+IFE L ET R VE R+ +R V+ +L VW W ++ FL GL+ATFLR E E+NA L D L R R GL G
Sbjct: 439 KDKDRPLSDLQRDKFEDLLRAITIARADICEAMVFALDNAESASEVAETLADALTLAETPVPTKVARLMLVSDVLHNSTAPVRNASRYRSLLEAHLPDIFESLQETYRSVESRMAQESLRRHVLRVLRVWRSWFIFSDDFLNGLQATFLRGASSGGDAEGELAEELNA--LPDDELETRCRRNGLSRRG 625 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15030.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15030.1.1 >prot_P-wetherbeei_contig15030.1.1 ID=prot_P-wetherbeei_contig15030.1.1|Name=mRNA_P-wetherbeei_contig15030.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=204bp RGRDRGKALGDKEFEQFSELLRELTLGRRSIADAMAFALDHADAAHEVADback to top mRNA from alignment at P-wetherbeei_contig15030:719..1590- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15030.1.1 ID=mRNA_P-wetherbeei_contig15030.1.1|Name=mRNA_P-wetherbeei_contig15030.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=872bp|location=Sequence derived from alignment at P-wetherbeei_contig15030:719..1590- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15030:719..1590- >mRNA_P-wetherbeei_contig15030.1.1 ID=mRNA_P-wetherbeei_contig15030.1.1|Name=mRNA_P-wetherbeei_contig15030.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=612bp|location=Sequence derived from alignment at P-wetherbeei_contig15030:719..1590- (Phaeothamnion wetherbeei SAG_119_79)back to top |