mRNA_P-wetherbeei_contig14999.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: L1JC23_GUITC (tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JC23_GUITC) HSP 1 Score: 105 bits (263), Expect = 7.670e-26 Identity = 53/94 (56.38%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIECRP 282
A RV LGLLP SE W +A LR +GGW HVH NV E AD A W++ + E+ QGRG W R HVE VK+YAPRVWHLVAD+E RP
Sbjct: 176 AHRVLLGLLPSSEQGWPVAVRCLRDDGGWLHVHENVAE-ADEA-TWLRQLEEELEKIARRQGRGEWRARVEHVEHVKTYAPRVWHLVADVEMRP 267
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: A0A835YSH8_9STRA (SAM_MT_TRM5_TYW2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSH8_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.100e-25 Identity = 57/97 (58.76%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIECRPAGA 291
ADRV LGLLP SE W +AAAVLR GGWCHVHGN + +G W + V +F G W V C HVE+VKSYAPRV H VADIECRPA A
Sbjct: 979 ADRVNLGLLPSSEDGWPVAAAVLRSTGGWCHVHGNYRD-GEGV-VWGEAVAEAFRALLQEVKGGAWRVDCRHVERVKSYAPRVAHFVADIECRPASA 1073
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: A0A6A4ZC06_9STRA (tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZC06_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.290e-25 Identity = 52/94 (55.32%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIECRP 282
ADRV LGLLP+SE W +A VL+P GGW HVH NV D W +HV+ S A G+ W V C HVE+VKSYAP+V H+VADI CRP
Sbjct: 65 ADRVNLGLLPKSEHGWPVAVQVLKPTGGWLHVHENVA--IDDLTTWREHVIQSIRNLGLAIGKA-WHVECPHVERVKSYAPKVLHVVADIHCRP 155
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: W2Q2I3_PHYPN (SAM_MT_TRM5_TYW2 domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q2I3_PHYPN) HSP 1 Score: 107 bits (268), Expect = 3.790e-25 Identity = 55/94 (58.51%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIECRP 282
ADRV LGLLP SE AW LA VL+P GGW HVH NV + W QHVL S R A Q W + C HVE+VKSYAP+V+HLVADI C P
Sbjct: 897 ADRVNLGLLPTSEKAWPLAVQVLKPSGGWFHVHDNVA--VEDRETWEQHVLDSM-RALAKQYGKHWTITCEHVERVKSYAPKVYHLVADIHCAP 987
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: A0A5D6Y558_9STRA (SAM_MT_TRM5_TYW2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y558_9STRA) HSP 1 Score: 107 bits (266), Expect = 7.060e-25 Identity = 55/95 (57.89%), Postives = 63/95 (66.32%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIECRPA 285
ADRV LGLLP S AW LA VL+P GGW HVH NV + AW Q +L + R A QG RW + C HVE+VKSYAP+V+HLVADI C PA
Sbjct: 926 ADRVNLGLLPTSVKAWPLAVQVLKPGGGWLHVHDNVA--VEDRDAWEQRLLEAL-RELARQGGKRWVITCEHVERVKSYAPKVFHLVADIRCVPA 1017
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: D0MYH9_PHYIT (tRNA wybutosine-synthesizing protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MYH9_PHYIT) HSP 1 Score: 106 bits (264), Expect = 1.310e-24 Identity = 54/92 (58.70%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIEC 276
ADRV LGLLP SE AW LA VL+P GGW HVH NV + +W QHV+ S R A Q +W+V C HVE+VKSYAP+V+HLVADI C
Sbjct: 846 ADRVNLGLLPTSEKAWPLAVQVLKPSGGWFHVHDNVA--VEDRESWEQHVVDSM-RALAKQHGKQWSVTCEHVERVKSYAPKVYHLVADIHC 934
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: A0A6U6A4E2_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6A4E2_GUITH) HSP 1 Score: 105 bits (263), Expect = 1.740e-24 Identity = 53/94 (56.38%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIECRP 282
A RV LGLLP SE W +A LR +GGW HVH NV E AD A W++ + E+ QGRG W R HVE VK+YAPRVWHLVAD+E RP
Sbjct: 595 AHRVLLGLLPSSEQGWPVAVRCLRDDGGWLHVHENVAE-ADEA-TWLRQLEEELEKIARRQGRGEWRARVEHVEHVKTYAPRVWHLVADVEMRP 686
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: A0A662Y683_9STRA (SAM_MT_TRM5_TYW2 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y683_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.790e-24 Identity = 55/94 (58.51%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIECRP 282
ADRV LGLLP SE AW LA VL+P GGW HVH NV + AW Q VL+S R A Q W + C HVE+VKSYAP+V HLVADI C P
Sbjct: 858 ADRVNLGLLPTSEKAWPLAVQVLKPSGGWFHVHDNVA--VEDREAWEQRVLTSM-RELALQFGKHWTITCEHVEKVKSYAPKVHHLVADIRCAP 948
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: A0A329T628_9STRA (tRNA wybutosine-synthesizing protein 2/3/4 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T628_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.790e-24 Identity = 54/94 (57.45%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIECRP 282
ADRV LGLLP SE AW LA VL+P GGW HVH NV + W QHV+ S R A Q W + C HVE+VKSYAP+V+HLVADI C P
Sbjct: 897 ADRVNLGLLPTSEKAWPLAVQVLKPSGGWFHVHDNVA--VEDRETWEQHVVDSM-RALAKQYGKHWTITCEHVERVKSYAPKVYHLVADIHCVP 987
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Match: A0A2D4BZ79_PYTIN (SAM_MT_TRM5_TYW2 domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ79_PYTIN) HSP 1 Score: 104 bits (260), Expect = 4.510e-24 Identity = 53/92 (57.61%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 1 ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVLSSFERHFAAQGRGRWAVRCHHVEQVKSYAPRVWHLVADIEC 276
ADRV LGLLP SE AW LA V++P GGW HVH NV + W +HV+ S AA G RW V C HVE+VKSYAP+V+HLVADI C
Sbjct: 735 ADRVNLGLLPTSEKAWPLAVQVMKPAGGWMHVHDNVA--TEDRERWEKHVVDSISALAAAHGH-RWRVTCEHVERVKSYAPKVFHLVADIRC 823 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14999.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14999.3.1 >prot_P-wetherbeei_contig14999.3.1 ID=prot_P-wetherbeei_contig14999.3.1|Name=mRNA_P-wetherbeei_contig14999.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp ADRVCLGLLPQSEAAWGLAAAVLRPEGGWCHVHGNVGERADGAHAWVQHVback to top mRNA from alignment at P-wetherbeei_contig14999:1186..1653- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14999.3.1 ID=mRNA_P-wetherbeei_contig14999.3.1|Name=mRNA_P-wetherbeei_contig14999.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig14999:1186..1653- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14999:1186..1653- >mRNA_P-wetherbeei_contig14999.3.1 ID=mRNA_P-wetherbeei_contig14999.3.1|Name=mRNA_P-wetherbeei_contig14999.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig14999:1186..1653- (Phaeothamnion wetherbeei SAG_119_79)back to top |