prot_P-wetherbeei_contig14957.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14957.2.1
Unique Nameprot_P-wetherbeei_contig14957.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length204
Homology
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: A0A351MEG4_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MEG4_9GAMM)

HSP 1 Score: 189 bits (481), Expect = 1.400e-57
Identity = 100/195 (51.28%), Postives = 135/195 (69.23%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGI 195
            VR G+R+LL        I EA++GE G +LF +L+PD++VMDLS+P + G+  I+RI A D A RILV S+H++TVFV QA++AGA GY++K +APEE+V AVR VA G+ Y+   IAQR+      G+ +P + LS REFEI  L   G    DIA +LS+ YKTV NY TQ+K KL+V + TEL +LAIR G+
Sbjct:   18 VRAGYRSLLTSAGDISVIGEASSGESGCRLFTQLQPDIVVMDLSLPGIGGLECIRRIVARDPAARILVFSMHEDTVFVEQALQAGACGYITKRAAPEELVTAVRQVASGRVYLESEIAQRLAFQKARGKASPLSTLSPREFEIFCLLAQGESASDIAGKLSLSYKTVANYSTQIKSKLEVGSVTELARLAIRSGL 212          
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: A0A523P5K4_9PROT (Response regulator transcription factor n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P5K4_9PROT)

HSP 1 Score: 183 bits (464), Expect = 4.910e-55
Identity = 94/198 (47.47%), Postives = 133/198 (67.17%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGIATV 198
            VR G+R LL        I EA +GE G++ + E KPD+++MDLS+P +SG+  I+RI A DS  +IL  ++H++TVFV QA++AGA GYV+K SAP  +V AV+ +A G  Y+  +IAQR+ +    G  + FA+LS REFEI SL   G+   +IA R+S+  KT+ NY TQ+K KL+V +  E+ +LAIRHGI  V
Sbjct:   16 VRAGYRVLLGSAKEIEIIAEADSGEAGFRAYTEHKPDIVIMDLSLPGISGLEAIRRIVARDSGAKILAFTMHEDTVFVEQALQAGARGYVTKSSAPAVLVEAVKQIAAGSIYLEPDIAQRLALQKLRGPRSSFARLSTREFEIFSLLAEGLNADEIATRVSLSSKTIANYSTQIKNKLEVNSVAEIVRLAIRHGIVKV 213          
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: A0A5C7EW22_9PROT (Response regulator transcription factor n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A5C7EW22_9PROT)

HSP 1 Score: 181 bits (459), Expect = 2.890e-54
Identity = 95/195 (48.72%), Postives = 133/195 (68.21%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGI 195
            VR GFR LL Q+     + EA +GE  Y+L+  LKPDV+VMDLSMP M G+ TI+RI A D + RILV S+H+   F +QA+K+GA+GY++K +AP+ IV AV  VARG+ Y++ ++AQR+ + T  G D+P A L+AREFE+  L   G     IA  L +  KTV NY TQ+K+KL V++  EL +LA++H +
Sbjct:   17 VRAGFRRLLEQRPEIRVLAEAVSGEDAYRLYGVLKPDVVVMDLSMPGMGGMGTIRRIVARDPSARILVFSIHESEAFALQALKSGALGYLTKAAAPDVIVTAVHEVARGRPYLAPDVAQRIALYTATGADDPLACLTAREFEVFQLVVDGRTIDQIAEALHLSSKTVANYATQIKQKLGVSSPVELVRLALKHRV 211          
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: I3CG89_9GAMM (Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Beggiatoa TaxID=1021 RepID=I3CG89_9GAMM)

HSP 1 Score: 181 bits (458), Expect = 4.490e-54
Identity = 90/199 (45.23%), Postives = 134/199 (67.34%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVI-TTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGIATV 198
            VR G+R L+ +Q     + EA+NGE+GYQL+ + +PDVIVMDLSMP   GITTIQR+++  +  R+LV S+H+E +F   A+ AGA GY++K SAPE +V A+  VA+G+ Y+ ++IAQ++ + +           LS REFE+  L   G+   DIA +L++ +KT+ NY +Q+++KL V N  EL +LAIRHGI  +
Sbjct:   19 VRAGYRRLIERQSHLQIVAEASNGEIGYQLYIQHQPDVIVMDLSMPGRGGITTIQRLSSRTNKARVLVFSMHEEPIFAEHALLAGASGYITKSSAPEVLVEAIERVAQGEMYLGNDIAQKLALHSVLNNASTGIKNLSTREFEVFRLLAEGLSTTDIAAQLAVSHKTIANYYSQIRQKLNVNNTAELIRLAIRHGIVKI 217          
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: A0A1G0JGK4_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JGK4_9GAMM)

HSP 1 Score: 179 bits (453), Expect = 2.410e-53
Identity = 96/195 (49.23%), Postives = 130/195 (66.67%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGI 195
            VR G++ LL        I EA +GE   + F EL+PDV+VMDLSMP + G+  I+RI A D+  RILV S+HD+TVFV  A++AGA GY+ K SAPE +V A+  +A GK++I  ++AQ++ +    G+D+PF+ LS REFEI  L   G+   +IA RLS+ YKTV NY TQ+K KL V    EL +LAIR+ I
Sbjct:   18 VRAGYQMLLKNSGDIEVIGEADSGERACKAFAELQPDVVVMDLSMPGIGGLEAIRRITARDANARILVFSMHDDTVFVEHALQAGARGYLCKSSAPEVLVEAIIELASGKSHIDSDMAQKLALQKARGKDSPFSNLSTREFEIFCLLAEGLNTSEIAKRLSLSYKTVANYSTQIKSKLNVTTVAELARLAIRNNI 212          
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: A0A1G0K0U5_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K0U5_9GAMM)

HSP 1 Score: 176 bits (445), Expect = 3.450e-52
Identity = 96/195 (49.23%), Postives = 127/195 (65.13%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGI 195
            VR G+R LL +Q     + EA  GE   +LF E +PDV+VMDLS+P +SG+  ++RI A +   RILV S+HD+ VF+ QA+ AGA GY+SK SA E +V A+R++A GK YI   +AQ +       +D+PFA+LS REFEI +L   G    +IA RL + YKTV NY TQ+K KL V    EL +LAIRH I
Sbjct:   15 VRAGYRMLL-EQAGIEIVAEADTGESACRLFTETEPDVVVMDLSLPGISGLEAVRRIVARERKARILVFSMHDDPVFIDQAISAGARGYISKRSAAEVMVEALRAIASGKVYIEPGLAQELAFRKIRDKDSPFAQLSTREFEICTLLAQGSNTSEIAKRLHLSYKTVANYSTQIKGKLGVGTTAELARLAIRHNI 208          
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: A0A1G0G5Y7_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G5Y7_9GAMM)

HSP 1 Score: 174 bits (441), Expect = 1.620e-51
Identity = 91/195 (46.67%), Postives = 126/195 (64.62%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGI 195
            VR G+R LL        + EA NGE   + + + KPD++VMDLS+P +     I+RI A D   RILV S+H+ TVFV QA++AGA GY++K SAPE ++ A+R +A G+ ++  +I+QR+      G+D PF+ LS REFEI  L   G+   +IA RLS+ YKTV NY TQ+K KL V+   E+ +LAIRH I
Sbjct:   19 VRAGYRMLLKNSEDIEVVAEAENGEQACRCYIDSKPDIVVMDLSLPGIGXXXAIRRIVARDPDARILVFSMHESTVFVEQALQAGARGYITKSSAPEVLIEAIRKLAAGQLHLDPDISQRLAYQKVRGKDTPFSNLSTREFEIFCLLAEGLNTSEIAKRLSLSYKTVANYSTQIKSKLNVSTVAEIARLAIRHKI 213          
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: A0A3M1DR94_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DR94_9GAMM)

HSP 1 Score: 174 bits (440), Expect = 2.220e-51
Identity = 97/195 (49.74%), Postives = 125/195 (64.10%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGI 195
            VR G+R LL          EA +GE   +L++E   DV+VMDLS+P + G+  I+RI A D A RILV S+H++TVFV QA++AGA GY+ K SAPE +V AVR +A G+ +I  +IAQR+      G  +PFA LS REFEI  L   G    +IA RLS+ YKTV NY TQVK KL      +L +LAIRHG+
Sbjct:   18 VRAGYRVLLESADDLVVTGEAESGEQACRLYQEQGADVVVMDLSLPGIGGLEAIRRIVARDPAARILVFSMHEDTVFVEQALQAGARGYLPKSSAPEVLVEAVRQIAAGELHIDGDIAQRLAFQKTRGRSSPFAGLSTREFEIFCLLAEGCNINEIADRLSLSYKTVANYSTQVKNKLGATTVADLARLAIRHGL 212          
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: A0A661CBG5_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661CBG5_9GAMM)

HSP 1 Score: 172 bits (436), Expect = 9.780e-51
Identity = 89/195 (45.64%), Postives = 129/195 (66.15%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGI 195
            VR G++ LL +      ++EA +GE   + + +  PDV+VMDLSMP + G+  I+RI A D+  +ILV S+H+ T+FV QA++AGA GY++K SAPE ++ A+R +A GK++I   IAQ++      GED PF+ LS REFEI  L   G+   +I+ RLS+ YKTV NY TQ+K KL  +   E+ +LAIR+ I
Sbjct:   21 VRAGYQMLLQKTDDIEVVSEAESGEQACKHYVDTNPDVVVMDLSMPGIGGLEAIRRIIARDANAKILVFSMHESTIFVEQALQAGAHGYITKSSAPEVLIDAIRELAAGKSHIDSEIAQQLAFKKAKGEDTPFSDLSTREFEIFCLLAEGLNTSEISKRLSLSYKTVANYSTQIKSKLNASTVAEIARLAIRYKI 215          
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Match: A0A3C0NQM9_9PROT (DNA-binding response regulator n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A3C0NQM9_9PROT)

HSP 1 Score: 168 bits (426), Expect = 2.810e-49
Identity = 91/195 (46.67%), Postives = 120/195 (61.54%), Query Frame = 0
Query:    1 VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSGITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIVGAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSGVEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGI 195
            VR G R L+  Q       EA NGE  YQLF   K DVIVMDLSMP M G+ + +RI     + +I++ S+HD   F  Q +KAG  GYV+K  A  +++ AV+ VA+GKTY+S  +AQ++V+    GEDNP   LSAREFE+  L T GV    I  RL I  KTV NY T +K+KL V +  E+ +LA+R G+
Sbjct:   17 VRSGLRRLMENQANIVVTVEAENGEQAYQLFSLSKVDVIVMDLSMPGMGGLESARRIIGRYPSAKIIIFSMHDNATFASQVLKAGVKGYVTKTGADSDLIKAVQEVAKGKTYLSPEVAQKIVMENMVGEDNPLNVLSAREFEVFRLLTEGVTTEGIGTRLKISQKTVANYHTMIKQKLGVNSPIEMVRLALRFGV 211          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14957.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A351MEG4_9GAMM1.400e-5751.28DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A523P5K4_9PROT4.910e-5547.47Response regulator transcription factor n=1 Tax=Pr... [more]
A0A5C7EW22_9PROT2.890e-5448.72Response regulator transcription factor n=2 Tax=Pr... [more]
I3CG89_9GAMM4.490e-5445.23Response regulator containing a CheY-like receiver... [more]
A0A1G0JGK4_9GAMM2.410e-5349.23DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A1G0K0U5_9GAMM3.450e-5249.23DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A1G0G5Y7_9GAMM1.620e-5146.67DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A3M1DR94_9GAMM2.220e-5149.74DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A661CBG5_9GAMM9.780e-5145.64DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A3C0NQM9_9PROT2.810e-4946.67DNA-binding response regulator n=1 Tax=Methylophil... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000792Transcription regulator LuxR, C-terminalPRINTSPR00038HTHLUXRcoord: 166..178
score: 36.09
coord: 136..150
score: 38.43
coord: 150..166
score: 33.74
IPR000792Transcription regulator LuxR, C-terminalSMARTSM00421luxrmega5coord: 133..190
e-value: 6.0E-10
score: 49.1
IPR000792Transcription regulator LuxR, C-terminalPFAMPF00196GerEcoord: 135..190
e-value: 3.0E-11
score: 42.7
IPR000792Transcription regulator LuxR, C-terminalPROSITEPS50043HTH_LUXR_2coord: 129..194
score: 23.115467
IPR000792Transcription regulator LuxR, C-terminalCDDcd06170LuxR_C_likecoord: 136..192
e-value: 9.12237E-12
score: 56.0036
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 1..103
e-value: 2.9E-15
score: 66.7
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 5..103
e-value: 6.3E-22
score: 77.9
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 1..107
score: 31.762617
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..196
e-value: 3.1E-47
score: 162.5
NoneNo IPR availablePIRSRPIRSR002937-1PIRSR002937-1coord: 15..116
e-value: 4.3E-11
score: 40.2
NoneNo IPR availablePANTHERPTHR43214TWO-COMPONENT RESPONSE REGULATORcoord: 1..197
NoneNo IPR availablePANTHERPTHR43214:SF3RESPONSE REGULATOR UVRYcoord: 1..197
NoneNo IPR availableCDDcd17535REC_NarL-likecoord: 1..108
e-value: 2.29873E-38
score: 126.473
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 2..120
IPR016032Signal transduction response regulator, C-terminal effectorSUPERFAMILY46894C-terminal effector domain of the bipartite response regulatorscoord: 129..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14957contigP-wetherbeei_contig14957:1047..1658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14957.2.1mRNA_P-wetherbeei_contig14957.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14957 1047..1658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14957.2.1 ID=prot_P-wetherbeei_contig14957.2.1|Name=mRNA_P-wetherbeei_contig14957.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=204bp
VRVGFRALLAQQVWCGTITEAANGELGYQLFRELKPDVIVMDLSMPKMSG
ITTIQRINAVDSATRILVVSVHDETVFVMQAMKAGAVGYVSKGSAPEEIV
GAVRSVARGKTYISDNIAQRMVITTFGGEDNPFAKLSAREFEIVSLATSG
VEPRDIAVRLSIHYKTVVNYLTQVKRKLKVANATELTKLAIRHGIATVNG
AMH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000792Tscrpt_reg_LuxR_C
IPR001789Sig_transdc_resp-reg_receiver
IPR011006CheY-like_superfamily
IPR016032Sig_transdc_resp-reg_C-effctor