prot_P-wetherbeei_contig14839.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14839.1.1
Unique Nameprot_P-wetherbeei_contig14839.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length322
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14839.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 266..322
e-value: 3.1E-6
score: 27.8
coord: 69..125
e-value: 8.1E-10
score: 39.3
coord: 159..201
e-value: 3.1E-5
score: 24.6
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 69..113
score: 11.458123
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 161..200
score: 11.209249
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 14..61
score: 10.265596
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 266..310
score: 10.711498
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 215..270
e-value: 1.1E-8
score: 36.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 158..214
e-value: 5.4E-8
score: 35.1
coord: 74..131
e-value: 6.6E-11
score: 44.4
coord: 271..322
e-value: 9.4E-10
score: 40.7
coord: 13..73
e-value: 2.2E-9
score: 39.5
NoneNo IPR availablePANTHERPTHR10131:SF65RING FINGER PROTEIN DG17-RELATEDcoord: 2..53
NoneNo IPR availablePANTHERPTHR10131:SF65RING FINGER PROTEIN DG17-RELATEDcoord: 46..127
NoneNo IPR availablePANTHERPTHR10131:SF65RING FINGER PROTEIN DG17-RELATEDcoord: 207..278
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 55..119
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 225..277
IPR043211TNF receptor-associated factor TRAFPANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 46..127
IPR043211TNF receptor-associated factor TRAFPANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 207..278
IPR043211TNF receptor-associated factor TRAFPANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14839contigP-wetherbeei_contig14839:7..1272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14839.1.1mRNA_P-wetherbeei_contig14839.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14839 7..1272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14839.1.1 ID=prot_P-wetherbeei_contig14839.1.1|Name=mRNA_P-wetherbeei_contig14839.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=322bp
MCGESVVARDAAEHRRSHCPMRPADCPECHAKVVACRLPRHRETLCPERA
VACPAGCGAEVAERRLAQHAATECELVTVACPLRCGSLMWRRLVDDHVAR
LCSERRASCRFGCGANVRAKDAKAHYESGADGGNCGGGGKSGAAAGSVDR
SCGDGPEEVGCPRMPRPCPDRCGALVARHDRPEHTAQYCPHRFVACPRGC
PLRPRAVDAAAHARNDCLLRPAECGGCGAAMQARRLEVHRSFECLHRLVN
CPACRQPLRLVDVPNHLENACQRRPVQCRQGCGHSVAAADLEEHHEMSCE
FRREPCPLRCGRMAPAAEMTAH
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
IPR043211TNF_rcpt-assoc_TRAF