prot_P-wetherbeei_contig14815.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14815.1.1
Unique Nameprot_P-wetherbeei_contig14815.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length319
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig14815.1.1 vs. uniprot
Match: A0A514WM23_9SPHN (CHAT domain-containing protein n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A514WM23_9SPHN)

HSP 1 Score: 58.9 bits (141), Expect = 6.270e-6
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = 0 
Query:  219 LELATVTEL-LGLVRTQQGRPADALDFYRQALAAMEAHLGSEHPRTADVLARLTATLEAAGLYAEAEPLARRTLEARVRNLGPSHRDVSASRIVLANCL 316
            +EL TV  + L  +  Q G  A A+   R A    EAHLGSEH  T   L +L A L   GLY +A P+ RRTL+ RV+ L   H D++ S   LA  L
Sbjct:  174 VELPTVAGITLASIEMQAGDSASAVAAARGAALWAEAHLGSEHRLTLAALNQLGAALNDGGLYGQATPILRRTLDLRVKLLPRDHPDIAYSLNALAFAL 272
[Close]
BLAST of mRNA_P-wetherbeei_contig14815.1.1 vs. uniprot
Match: UPI0018AF5456 (CHAT domain-containing protein n=1 Tax=Novosphingobium jiangmenense TaxID=2791981 RepID=UPI0018AF5456)

HSP 1 Score: 55.8 bits (133), Expect = 6.210e-5
Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 0 
Query:  228 LGLVRTQQGRPADALDFYRQALAAMEAHLGSEHPRTADVLARLTATLEAAGLYAEAEPLARRTLEARVRNLGPSHRDVSAS 308
            L  +  Q G  A +++  R+A    E HLG +H  T   L +L A+L  +GLYA+A P+ RRTL+ RV+   P H D++ S
Sbjct:  209 LAALLIQSGDTASSIEPAREAAVWAETHLGEDHRVTMAALNQLGASLSDSGLYAQAIPVIRRTLDLRVKAYPPGHTDIAFS 289
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14815.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A514WM23_9SPHN6.270e-642.42CHAT domain-containing protein n=2 Tax=Sphingomona... [more]
UPI0018AF54566.210e-539.51CHAT domain-containing protein n=1 Tax=Novosphingo... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 13..46
e-value: 0.24
score: 20.5
coord: 97..130
e-value: 11.0
score: 14.7
coord: 181..214
e-value: 26.0
score: 11.3
coord: 139..172
e-value: 4.4
score: 16.3
coord: 222..255
e-value: 11.0
score: 14.7
coord: 264..297
e-value: 180.0
score: 3.9
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 15..40
e-value: 5.7E-4
score: 19.9
NoneNo IPR availablePFAMPF13424TPR_12coord: 221..293
e-value: 2.9E-12
score: 46.7
coord: 98..170
e-value: 1.3E-15
score: 57.4
NoneNo IPR availablePANTHERPTHR46082:SF6ATP/GTP-BINDING PROTEIN-RELATEDcoord: 84..306
NoneNo IPR availablePANTHERPTHR46082ATP/GTP-BINDING PROTEIN-RELATEDcoord: 84..306
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 212..319
e-value: 6.5E-23
score: 83.1
coord: 1..60
e-value: 1.7E-5
score: 25.9
coord: 61..211
e-value: 1.2E-25
score: 92.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 95..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14815contigP-wetherbeei_contig14815:1..1071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14815.1.1mRNA_P-wetherbeei_contig14815.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14815 1..1071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14815.1.1 ID=prot_P-wetherbeei_contig14815.1.1|Name=mRNA_P-wetherbeei_contig14815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=319bp
QEASFGPNSPVLMGLLYDLGEAYLKLGRPAEAKAFLERSLVLQEATDGQA
VATLVVTLEKIGAEELASGLGVHAEGKFRTALVLRDQLGVSDPGGVAATS
QGLGRALNLQGRWEEAESVLRKSFELRSQLLGSESPVTIDTLFDLAECYR
GQRKFDAAESFLTRVADLRKRLVGPADISVGQSYRALGQLKIDSQNFALA
EEHLSKALDIFTASGASALELATVTELLGLVRTQQGRPADALDFYRQALA
AMEAHLGSEHPRTADVLARLTATLEAAGLYAEAEPLARRTLEARVRNLGP
SHRDVSASRIVLANCLTRQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf