mRNA_P-wetherbeei_contig14736.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14736.1.1
Unique NamemRNA_P-wetherbeei_contig14736.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: A0A127F4J9_9HYPH (D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F4J9_9HYPH)

HSP 1 Score: 310 bits (793), Expect = 1.850e-102
Identity = 153/268 (57.09%), Postives = 204/268 (76.12%), Query Frame = 1
Query:    1 DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEGRRDEMLNIV 804
            +V+VALAH VS  ++ A PKL+WI ALTTGTD L     L  ++L+T+ RGIHGPQMSELA ++MIALSR   +M+ NQA AKWERW QP+L+ KT+VI+G+G + E LA RC+ FGM +VGVS  R   P FD+V+PR KL+D AA ADFL++LVP +  T H+++ DVLAAMK ++F+INIARG V+DE ALI  L+ G+IAGAG+D+F+++PP P++PLW MPNVI+TP IGG SD++  Q   ++  NLRAF +GR  +M N+V
Sbjct:   43 EVLVALAHHVSDDLLTAMPKLRWIAALTTGTDHLNGLKHLRKNVLVTNGRGIHGPQMSELAIMNMIALSRRLPQMQRNQAAAKWERWPQPVLQEKTVVIIGVGQIGECLADRCRAFGMKIVGVSDARPKIPGFDKVFPRTKLKDAAALADFLVVLVPLTAETQHMISDDVLAAMKPSSFIINIARGDVIDEAALIRRLQDGRIAGAGLDVFAEEPPAPDNPLWSMPNVIMTPRIGGMSDRYPEQAFPLMVHNLRAFADGRLKDMRNVV 310          
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: UPI00143CCBC7 (D-2-hydroxyacid dehydrogenase n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI00143CCBC7)

HSP 1 Score: 294 bits (752), Expect = 1.430e-96
Identity = 144/268 (53.73%), Postives = 196/268 (73.13%), Query Frame = 1
Query:    1 DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEGRRDEMLNIV 804
            D++V +AH ++  +IA  PKL++I A++ GTD +     L   +L+TS RGIHGPQMSELAFL MI+LSR+F +M+ NQA   WERW Q +L GKT+V+VG+G +AE LA+RC  FGM V+G+S  R +AP+FD++ PR +L + AA ADF+++LVP+S  THH++NADVL AMK+T  LIN+ARG V+DE  L+  L+ G+I GA +D+F  +P P + PLW M NVI+TP IGG SD +  Q L +V  NLR FL+GRR +M NIV
Sbjct:   18 DIVVTMAHDLTDDLIARMPKLRYICAMSAGTDKVDTLKGLKPDVLVTSARGIHGPQMSELAFLSMISLSREFPKMQRNQARHIWERWPQKLLWGKTVVLVGIGPIAEDLALRCAAFGMRVIGISDARKEAPHFDKMLPRARLEEAAAEADFMVVLVPFSPQTHHMINADVLRAMKNTGILINLARGPVVDEKELVKALQEGRIGGAALDVFEAEPLPSDSPLWDMLNVIVTPRIGGMSDVYTEQVLPLVVHNLRCFLDGRRADMKNIV 285          
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: UPI0009FB22B4 (D-2-hydroxyacid dehydrogenase n=1 Tax=Bradyrhizobium mercantei TaxID=1904807 RepID=UPI0009FB22B4)

HSP 1 Score: 295 bits (754), Expect = 8.610e-96
Identity = 147/268 (54.85%), Postives = 201/268 (75.00%), Query Frame = 1
Query:    1 DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEGRRDEMLNIV 804
            ++++ALAH VS+ +I   P+L WI ALTTGTD L     LP+ +++TS RGIHGPQM+ELAF++MIALSR+   + ANQA   WER  Q +L GK+ V+VG+G ++E +A+RCK FGM  +GVS  RS+A  FD + PR +L + AA ADFL++LVPYS  THH+++  VL+AMK +A LINIARG V+DE ALI  L+ GKIAGAG+D+++++PP P++PLW M NVI+TP IGG SD +  Q L ++  N+RA+LEGR D++ NIV
Sbjct:   94 EILIALAHEVSQKLIHDMPRLHWIAALTTGTDHLDTLEDLPAGLIVTSGRGIHGPQMAELAFMYMIALSRNLRGILANQAHQAWERRPQRLLLGKSAVLVGVGAISEDVALRCKAFGMETLGVSDSRSEARGFDRIVPRARLHEAAAEADFLIVLVPYSSRTHHMIDDAVLSAMKQSAILINIARGNVVDETALIRLLQHGKIAGAGLDVYAEEPPRPDNPLWSMDNVIMTPRIGGMSDIYAQQALPLLVDNMRAYLEGRIDDIQNIV 361          
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: A0A345ZS53_9HYPH (D-2-hydroxyacid dehydrogenase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZS53_9HYPH)

HSP 1 Score: 290 bits (742), Expect = 1.060e-94
Identity = 143/268 (53.36%), Postives = 197/268 (73.51%), Query Frame = 1
Query:    1 DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEGRRDEMLNIV 804
            +V+VA+AH V+  ++ A P+LK+I A++ GTD L     L + + +TS RGIHGPQMSELAFL MIALSR+F RM+ NQ   +WERW Q +L GKT+++VG+G +AE LA+RC+ FG+ V+GVS  R +AP+F  +YPR +L++ AA ADF+++LVP S  T H+++A+VLAAMK T  ++N+ARG V+DE ALI  L+  +I GA +D+F  +PP  ++PLW MPNVIITP IGG SD +  Q L +V  NLR FL+GR  EM NI+
Sbjct:   43 EVLVAMAHDVTDELVGAMPRLKYICAMSAGTDRLDTLKNLKADVRITSGRGIHGPQMSELAFLGMIALSREFPRMQQNQRARRWERWPQKLLFGKTVLLVGIGPIAEELALRCEAFGLRVLGVSDARKEAPHFAALYPRSRLKEAAALADFMIVLVPLSDKTRHMIDAEVLAAMKPTGIIVNLARGPVIDEQALIKALQEKRIGGAALDVFETEPPVEDNPLWDMPNVIITPRIGGMSDVYAQQVLPLVVHNLRCFLDGRPSEMKNIL 310          
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: A0A1Q4B9W3_9HYPH (2-Hacid_dh_C domain-containing protein n=1 Tax=Rhizobiales bacterium 62-17 TaxID=1895810 RepID=A0A1Q4B9W3_9HYPH)

HSP 1 Score: 287 bits (735), Expect = 1.180e-93
Identity = 143/268 (53.36%), Postives = 192/268 (71.64%), Query Frame = 1
Query:    1 DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEGRRDEMLNIV 804
            +++VALAH VS  ++AA P+L+++ +LT G D L +   L   + +TS RGIHGPQMSELAFL+MI+LSRDF+ M+ANQ    W+RW Q +L GKT V+VG+G +AE +A RCK FGM V+G+S  R+ AP FD + PR +L++ A  ADFL++LVP S+ T H+++  VL+AMK    +IN+ARG V+DE ALI  L+ G + GAG+D+F ++PPP   PLW MPNVIITP IGG SD F  Q L +V  NL  F EGR  +M+NIV
Sbjct:   43 EILVALAHDVSDELVAAMPRLRYVCSLTAGVDHLHSLKALQPDVRITSGRGIHGPQMSELAFLYMISLSRDFSAMQANQRAHVWQRWPQKLLLGKTAVLVGIGPIAEEMAARCKAFGMTVIGISDARASAPGFDRLMPRAQLQEAAHLADFLIVLVPLSERTRHMIDDGVLSAMKRGGVVINLARGPVVDEKALIKRLQDGTLGGAGLDVFEEEPPPDQSPLWDMPNVIITPRIGGMSDVFSKQILPIVTHNLTCFAEGRAADMINIV 310          
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: A0A1H4WLM6_9HYPH (Phosphoglycerate dehydrogenase n=1 Tax=Beijerinckia sp. 28-YEA-48 TaxID=1882748 RepID=A0A1H4WLM6_9HYPH)

HSP 1 Score: 286 bits (732), Expect = 3.370e-93
Identity = 142/268 (52.99%), Postives = 189/268 (70.52%), Query Frame = 1
Query:    1 DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEGRRDEMLNIV 804
            +++VALAH V+  +IAA P L++I +LT G D L     L + + +TS RGIHGPQMSELAFL+MIALSR+F  M+ANQ    W+RW Q +L GKT V++G+G +AE +A RCK FGM V+G+S  R+ AP FD + PR +L++ A  ADFL++LVP SK T H+++  VL AMK+   LIN+ARG V+DE  L+  L+ G + GAG+D+F ++PPP   PLW MPNVIITP IGG SD F  Q L +V  NL  F EGR  +M+N+V
Sbjct:   43 EILVALAHDVTDDLIAAMPHLRYICSLTAGVDHLHGLKALKADVRITSGRGIHGPQMSELAFLYMIALSRNFPAMQANQRNHVWQRWPQTLLLGKTAVLIGIGPIAEDMAARCKAFGMQVIGISDARASAPGFDRLMPRAQLQEAAGLADFLIVLVPLSKRTRHMIDDSVLLAMKNGGILINLARGPVVDEAVLVKRLQDGSLGGAGLDVFEEEPPPDQSPLWDMPNVIITPRIGGMSDVFAKQILPIVAHNLACFTEGRAADMINVV 310          
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: A0A1E4IAB9_9BURK (2-Hacid_dh_C domain-containing protein n=1 Tax=Rubrivivax sp. SCN 71-131 TaxID=1660138 RepID=A0A1E4IAB9_9BURK)

HSP 1 Score: 285 bits (728), Expect = 2.360e-92
Identity = 144/255 (56.47%), Postives = 184/255 (72.16%), Query Frame = 1
Query:   40 MIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEGRRDEMLNIV 804
            ++A APKL+W+Q+LTTGTD +     L   +++TSTRG+HGPQMSEL FLHM+AL+RDF RM+ NQA A WERW QP+L GKT+VIVG+G +AE LA RCK FGM VVGVS    +   FD V  R +L D  A ADF++L+VP +  T +LV+A V+ AMK  A+LIN ARGGVLDEDAL+A L+  +IAGAG+D+F QQP P + P W  P VI+TP +GG SD ++ Q   +V+ NLR FL GR  E+ N V
Sbjct:   65 LVARAPKLRWVQSLTTGTDQILRLRALGEDVVVTSTRGMHGPQMSELVFLHMLALARDFPRMQRNQAAATWERWPQPLLWGKTVVIVGVGAIAEALAPRCKAFGMTVVGVSGAPREIAGFDRVVVRAELADAVAEADFVVLIVPLAADTENLVDARVIGAMKPGAYLINAARGGVLDEDALLAALRQRRIAGAGLDVFRQQPLPADSPWWHEPGVIVTPLVGGMSDIYLQQAFPIVDANLRLFLAGRVGELHNAV 319          
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: UPI0010C0BBED (D-2-hydroxyacid dehydrogenase n=1 Tax=Rhizobium sp. FY34 TaxID=2562309 RepID=UPI0010C0BBED)

HSP 1 Score: 280 bits (717), Expect = 6.730e-91
Identity = 138/268 (51.49%), Postives = 188/268 (70.15%), Query Frame = 1
Query:    1 DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEGRRDEMLNIV 804
            + ++A A      ++ + P L+WI +LT G D L A   L   + +T++ GIHGPQMSE+AFL M+A +R F  M ANQA A WERW QP+L  KT  IVGLG +AE L  RC+ FGM V GVSSGRSD    D +YPRE LR+ AA ADFL++LVPY+ +THHL++A VLA+MK ++ LIN++RGG +DEDAL   L+AG +  AG D+FSQ+P P ++PLW +PN+I+TP++GG SD +  QT+ ++  NL+ FL G  D + N+V
Sbjct:   41 EALIAFAPSTPASLLESLPALRWIHSLTAGVDRLMAMPALGRGVAVTTSSGIHGPQMSEMAFLLMLAAARQFPAMIANQAAAHWERWPQPLLLNKTACIVGLGAIAETLVERCRAFGMRVTGVSSGRSDMAGVDRIYPREALREAAAEADFLIVLVPYAASTHHLIDASVLASMKRSSILINLSRGGCVDEDALCKALRAGNLFAAGCDVFSQEPLPSDNPLWSLPNLIVTPHVGGWSDVYAEQTVPLLRRNLQRFLAGDIDGLENLV 308          
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: A0A2N3BH28_9PROT (D-2-hydroxyacid dehydrogenase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-4 TaxID=2013667 RepID=A0A2N3BH28_9PROT)

HSP 1 Score: 280 bits (717), Expect = 8.700e-91
Identity = 140/259 (54.05%), Postives = 181/259 (69.88%), Query Frame = 1
Query:    1 DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEG 777
             V++ LA  +   +IAA P+L W+ ALTTG D L A   L   + L+S+RGIHGPQMSELA L M++L R   +M ANQ+   W+RW QP+L GKT  +VGLG +AE LA R   FG+ V GVS GR +   F  ++PR +LR+ AA ADFL+++VPY+  THHLVN  VLAAM + AFLINI+RGG +DE AL+ HL  G IAGAG+D+F+ +P PP HP+W  PNVIITP++GG SD + AQ L V+  N+ AFL G
Sbjct:   45 QVLIGLAPALPASLIAAMPRLAWVHALTTGVDNLLAMPELGIEVALSSSRGIHGPQMSELAILLMLSLGRRLPQMLANQSAQVWQRWPQPLLAGKTACLVGLGAIAEALAARLHAFGVTVTGVSDGRGEVTGFARIFPRARLREAAAEADFLVVIVPYAPQTHHLVNDAVLAAMPARAFLINISRGGCVDEAALLRHLATGSIAGAGLDVFATEPLPPGHPIWSAPNVIITPHVGGMSDTYAAQALPVLARNIAAFLAG 303          
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Match: UPI001680FCE3 (D-2-hydroxyacid dehydrogenase n=1 Tax=Roseibium aggregatum TaxID=187304 RepID=UPI001680FCE3)

HSP 1 Score: 280 bits (715), Expect = 1.540e-90
Identity = 138/268 (51.49%), Postives = 188/268 (70.15%), Query Frame = 1
Query:    1 DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTRGIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIVGLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARADFLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKAGKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVEPNLRAFLEGRRDEMLNIV 804
            +++  LA  +   MI A PKLKWIQALTTG D L     L S +++T+TRG+HGPQMSELA L M++L+R F  M ANQ  + W++W QP+L+ KT+ IVGLG++AE LA RC  FGM V GVS GRS+   F  ++ R ++++ AA ADF++++VPY   THH+VNADVL AMK +A+LINIARGG +D+DA++  LK G+IAGAG+D+F+ +P     PLW  PN+IITP+IGG SD +  Q   +V  NL AF  G    + N++
Sbjct:   46 EILCGLAPFIPVDMIRAMPKLKWIQALTTGVDHLLHMPELASDVVITNTRGMHGPQMSELAVLLMMSLARQFPAMLANQKTSAWKQWPQPLLQDKTVCIVGLGVIAEALAARCNPFGMRVTGVSDGRSEVEGFARIFKRSQIKEAAAEADFVVVIVPYGPETHHIVNADVLKAMKQSAYLINIARGGCVDQDAVVEALKNGEIAGAGLDVFNTEPLRETSPLWSAPNLIITPHIGGMSDCYAQQAQPIVAENLNAFARGGATALKNVI 313          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14736.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127F4J9_9HYPH1.850e-10257.09D-isomer specific 2-hydroxyacid dehydrogenase NAD-... [more]
UPI00143CCBC71.430e-9653.73D-2-hydroxyacid dehydrogenase n=1 Tax=Pseudolabrys... [more]
UPI0009FB22B48.610e-9654.85D-2-hydroxyacid dehydrogenase n=1 Tax=Bradyrhizobi... [more]
A0A345ZS53_9HYPH1.060e-9453.36D-2-hydroxyacid dehydrogenase n=1 Tax=Pseudolabrys... [more]
A0A1Q4B9W3_9HYPH1.180e-9353.362-Hacid_dh_C domain-containing protein n=1 Tax=Rhi... [more]
A0A1H4WLM6_9HYPH3.370e-9352.99Phosphoglycerate dehydrogenase n=1 Tax=Beijerincki... [more]
A0A1E4IAB9_9BURK2.360e-9256.472-Hacid_dh_C domain-containing protein n=1 Tax=Rub... [more]
UPI0010C0BBED6.730e-9151.49D-2-hydroxyacid dehydrogenase n=1 Tax=Rhizobium sp... [more]
A0A2N3BH28_9PROT8.700e-9154.05D-2-hydroxyacid dehydrogenase n=1 Tax=Alphaproteob... [more]
UPI001680FCE31.540e-9051.49D-2-hydroxyacid dehydrogenase n=1 Tax=Roseibium ag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14736contigP-wetherbeei_contig14736:868..1680 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1123060.JONP01000011_gene3085
PFAMs2-Hacid_dh_C
Model size813
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.68e-85
EggNOG OGsCOG0111@1|root,COG0111@2|Bacteria,1MW1U@1224|Proteobacteria,2TSUU@28211|Alphaproteobacteria,2JWNR@204441|Rhodospirillales
DescriptionD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Cds size813
COG categoryEH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186032.0983796-CDS-P-wetherbeei_contig14736:867..16801683186032.0983796-CDS-P-wetherbeei_contig14736:867..1680Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14736 868..1680 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14736.1.1prot_P-wetherbeei_contig14736.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14736 868..1680 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14736.1.1

>prot_P-wetherbeei_contig14736.1.1 ID=prot_P-wetherbeei_contig14736.1.1|Name=mRNA_P-wetherbeei_contig14736.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
DVIVALAHGVSKPMIAAAPKLKWIQALTTGTDTLTAPGVLPSSILLTSTR
GIHGPQMSELAFLHMIALSRDFNRMRANQAEAKWERWNQPILEGKTIVIV
GLGILAEHLAIRCKMFGMLVVGVSSGRSDAPNFDEVYPREKLRDVAARAD
FLLLLVPYSKATHHLVNADVLAAMKSTAFLINIARGGVLDEDALIAHLKA
GKIAGAGIDIFSQQPPPPNHPLWRMPNVIITPNIGGHSDKFVAQTLAVVE
PNLRAFLEGRRDEMLNIVPH*
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mRNA from alignment at P-wetherbeei_contig14736:868..1680-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14736.1.1 ID=mRNA_P-wetherbeei_contig14736.1.1|Name=mRNA_P-wetherbeei_contig14736.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig14736:868..1680- (Phaeothamnion wetherbeei SAG_119_79)
GACGTGATCGTGGCGCTGGCCCACGGCGTGTCGAAGCCGATGATAGCCGC CGCGCCGAAGCTCAAATGGATCCAGGCGCTGACCACCGGCACCGATACCC TGACGGCGCCCGGCGTGCTGCCGTCCAGCATTCTGCTCACCTCGACGCGC GGCATCCATGGGCCGCAGATGAGCGAGTTGGCGTTCCTGCACATGATCGC GCTCAGCCGCGATTTCAACAGAATGCGCGCGAATCAGGCCGAGGCAAAAT GGGAACGCTGGAACCAGCCGATCCTGGAAGGCAAAACCATCGTCATCGTC GGGCTGGGCATCCTGGCGGAACACCTCGCCATCCGCTGCAAGATGTTCGG CATGCTTGTGGTGGGGGTGAGCAGCGGGCGCAGCGATGCGCCGAACTTCG ACGAGGTTTATCCGCGTGAAAAATTGCGCGACGTCGCCGCGCGCGCAGAT TTCCTCCTGCTGCTGGTCCCCTACTCCAAGGCAACGCACCATCTGGTGAA CGCCGACGTGCTGGCGGCGATGAAGTCGACCGCATTCCTGATCAACATCG CGCGCGGCGGCGTGCTAGACGAAGACGCACTGATCGCGCACCTGAAAGCC GGCAAGATCGCCGGCGCCGGGATCGATATCTTCTCGCAGCAGCCCCCGCC GCCAAACCATCCGCTCTGGCGCATGCCCAACGTCATCATCACACCGAACA TCGGCGGCCATAGCGACAAGTTCGTCGCGCAGACGCTGGCGGTGGTGGAA CCGAACCTGCGGGCTTTTCTGGAGGGGCGGCGGGACGAGATGCTTAATAT CGTGCCCCATTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14736:868..1680-

>mRNA_P-wetherbeei_contig14736.1.1 ID=mRNA_P-wetherbeei_contig14736.1.1|Name=mRNA_P-wetherbeei_contig14736.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig14736:868..1680- (Phaeothamnion wetherbeei SAG_119_79)
GACGTGATCGTGGCGCTGGCCCACGGCGTGTCGAAGCCGATGATAGCCGC
CGCGCCGAAGCTCAAATGGATCCAGGCGCTGACCACCGGCACCGATACCC
TGACGGCGCCCGGCGTGCTGCCGTCCAGCATTCTGCTCACCTCGACGCGC
GGCATCCATGGGCCGCAGATGAGCGAGTTGGCGTTCCTGCACATGATCGC
GCTCAGCCGCGATTTCAACAGAATGCGCGCGAATCAGGCCGAGGCAAAAT
GGGAACGCTGGAACCAGCCGATCCTGGAAGGCAAAACCATCGTCATCGTC
GGGCTGGGCATCCTGGCGGAACACCTCGCCATCCGCTGCAAGATGTTCGG
CATGCTTGTGGTGGGGGTGAGCAGCGGGCGCAGCGATGCGCCGAACTTCG
ACGAGGTTTATCCGCGTGAAAAATTGCGCGACGTCGCCGCGCGCGCAGAT
TTCCTCCTGCTGCTGGTCCCCTACTCCAAGGCAACGCACCATCTGGTGAA
CGCCGACGTGCTGGCGGCGATGAAGTCGACCGCATTCCTGATCAACATCG
CGCGCGGCGGCGTGCTAGACGAAGACGCACTGATCGCGCACCTGAAAGCC
GGCAAGATCGCCGGCGCCGGGATCGATATCTTCTCGCAGCAGCCCCCGCC
GCCAAACCATCCGCTCTGGCGCATGCCCAACGTCATCATCACACCGAACA
TCGGCGGCCATAGCGACAAGTTCGTCGCGCAGACGCTGGCGGTGGTGGAA
CCGAACCTGCGGGCTTTTCTGGAGGGGCGGCGGGACGAGATGCTTAATAT
CGTGCCCCATTAA
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