mRNA_P-wetherbeei_contig14697.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14697.2.1
Unique NamemRNA_P-wetherbeei_contig14697.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: A0A7Z9PPU1_9BACT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PPU1_9BACT)

HSP 1 Score: 417 bits (1072), Expect = 1.450e-144
Identity = 197/256 (76.95%), Postives = 227/256 (88.67%), Query Frame = 1
Query:    1 VKTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINLGTGISV 768
            +KTILVTGGAGFIGSNFVRYIL KYPDYRVIVLD+LTYAGN +NLPQ+ +      + RL FWYGNV NA LV+ L++ESD VVHFAAESHVTRSIYDN+IFFETDV+GTQVIAN+VL++ D++++FIHISTSEVYGTA   VMDEEHALKPMSPYASAKAGADRLVYSYWATY IPA IIRPFNNYG YQHLEKVVPRFIT+ ILGEP+TVHG+G+A+RDWL+V+DHC ALDKALH   + ++GEVINLG+G S+
Sbjct:    1 MKTILVTGGAGFIGSNFVRYILDKYPDYRVIVLDILTYAGNTDNLPQDLLQQADADNPRLSFWYGNVGNASLVNTLMAESDMVVHFAAESHVTRSIYDNRIFFETDVMGTQVIANSVLNHADRIEKFIHISTSEVYGTAEGQVMDEEHALKPMSPYASAKAGADRLVYSYWATYDIPATIIRPFNNYGPYQHLEKVVPRFITSAILGEPMTVHGQGQASRDWLYVKDHCQALDKALHKQGDDLKGEVINLGSGRSI 256          
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: A0A7X9AES7_9BURK (NAD-dependent epimerase/dehydratase family protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7X9AES7_9BURK)

HSP 1 Score: 411 bits (1056), Expect = 4.060e-142
Identity = 191/255 (74.90%), Postives = 221/255 (86.67%), Query Frame = 1
Query:    4 KTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINLGTGISV 768
            KTILVTGGAGFIGSNFVRY+L+ YPDY+V+VLD+LTYAGN ENLPQ++++    G  RL FWYGNV N ELVD LVS+ D VVHFAAESHVTRSIYDN IFFETDV+GTQV++NAVL ++D+++R IHISTSEVYGTA   +MDE+H L PMSPYASAKAGADRLVYSYWATYK+P +I RPFNNYG YQHLEKVVPRFIT+ ILGEPLTVHG+G A RDWL+V DHC ALDK +HAP + ++GEVINLGTG S+
Sbjct:    3 KTILVTGGAGFIGSNFVRYVLENYPDYKVVVLDVLTYAGNMENLPQQYMNPGNNGHGRLNFWYGNVRNGELVDTLVSQCDIVVHFAAESHVTRSIYDNWIFFETDVMGTQVVSNAVLKHQDRIERMIHISTSEVYGTARAEIMDEDHRLMPMSPYASAKAGADRLVYSYWATYKLPMVIARPFNNYGPYQHLEKVVPRFITSAILGEPLTVHGDGSAQRDWLYVGDHCQALDKLMHAPMDNLKGEVINLGTGRSI 257          
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: A0A679HH27_9BACT (dTDP-glucose 4,6-dehydratase n=1 Tax=Nitrospira sp. KM1 TaxID=1936990 RepID=A0A679HH27_9BACT)

HSP 1 Score: 404 bits (1039), Expect = 1.410e-139
Identity = 192/253 (75.89%), Postives = 217/253 (85.77%), Query Frame = 1
Query:    1 VKTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINLGTG 759
            +KTIL+TGGAGFIGSNFVRY+  KYP+YR+IVLD LTYAGN +NLP   +D     D RLVFWYGNV N ELVD ++S+SDAVVHFAAESHVTRSIYDN +FFETDVLGTQ +ANAVL YRD+++RF+HISTSEVYGTA+   M E+H L PMSPYASAK GADRLVYSYW TYKIPA+I+RPFNNYG YQHLEKVVPRFIT+C+LGEPLTVHG+G AARD+L VQDHC ALD  LHA  EKV GEVIN+GTG
Sbjct:    1 MKTILITGGAGFIGSNFVRYLYDKYPEYRLIVLDALTYAGNIKNLP---VDINSGSDERLVFWYGNVRNGELVDTIMSQSDAVVHFAAESHVTRSIYDNLLFFETDVLGTQTVANAVLKYRDRIERFVHISTSEVYGTAMAERMSEDHPLLPMSPYASAKCGADRLVYSYWETYKIPAIIVRPFNNYGPYQHLEKVVPRFITSCLLGEPLTVHGDGTAARDFLHVQDHCEALDLILHASREKVVGEVINIGTG 250          
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: A0A532D110_9BACT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532D110_9BACT)

HSP 1 Score: 399 bits (1025), Expect = 2.330e-137
Identity = 189/253 (74.70%), Postives = 216/253 (85.38%), Query Frame = 1
Query:    1 VKTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINLGTG 759
            VKTIL+TGGAGFIGSNFVRY+  KYP+YR+IVLD LTYAGN +NLP   +D     D RL+FWYGNV N ELVD +VS+SD V HFAAESHVTRSIYDN +FFETDVLGTQ +ANAVL YRD+++RFIHISTSEVYG+A+   M E+H L PMSPYASAK GADRLVYSYW TYKIPA+I+RPFNNYG YQHLEKVVPRFIT+C+LGEPLTVHG+G AARD+++VQDHC ALD  LHA  +KV G+VINLGTG
Sbjct:    7 VKTILITGGAGFIGSNFVRYLYDKYPNYRLIVLDALTYAGNVKNLP---VDINNGSDERLMFWYGNVRNGELVDTVVSQSDVVFHFAAESHVTRSIYDNLLFFETDVLGTQAVANAVLKYRDRIERFIHISTSEVYGSAVADKMGEDHPLLPMSPYASAKCGADRLVYSYWETYKIPAVIVRPFNNYGPYQHLEKVVPRFITSCLLGEPLTVHGDGSAARDFIYVQDHCEALDLILHADRDKVVGQVINLGTG 256          
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: A0A3D5Y925_9DELT (Epimerase n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A3D5Y925_9DELT)

HSP 1 Score: 391 bits (1004), Expect = 3.060e-134
Identity = 186/253 (73.52%), Postives = 213/253 (84.19%), Query Frame = 1
Query:    4 KTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINLGTGI 762
            K ILVTGGAGFIGSNFVR+I KKYPDY++IVLD LTYAG+ ENLP   I+     D RL FWYGNV N ELVD L+S+SD VVHFAAE+HVTRSIYDN +FFETDVLGTQ IANAVL Y+D+++RFIHISTSEVYGTA    MDEEH L PMSPYASAKAGADRLVYSYWATY+IPA+IIRPFNNYG YQHLEK VPRF+T+CIL EP+ VHG+G AARD++FV+D C A+D A+HA  +KV GEV N+ +GI
Sbjct:    3 KKILVTGGAGFIGSNFVRHIYKKYPDYKIIVLDALTYAGSIENLP---ININENSDERLAFWYGNVKNGELVDTLISQSDVVVHFAAETHVTRSIYDNFLFFETDVLGTQTIANAVLKYKDRIERFIHISTSEVYGTARKEFMDEEHPLMPMSPYASAKAGADRLVYSYWATYEIPAIIIRPFNNYGPYQHLEKAVPRFVTSCILNEPIRVHGDGGAARDYIFVEDACMAIDMAMHADIKKVRGEVFNVASGI 252          
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: A0A2V9J4B9_9BACT (Epimerase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9J4B9_9BACT)

HSP 1 Score: 388 bits (997), Expect = 7.780e-133
Identity = 182/253 (71.94%), Postives = 214/253 (84.58%), Query Frame = 1
Query:    1 VKTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINLGTG 759
            +KTILVTGGAGFIGSNFVRY+  KYPDYR+IVLD+LTYAGN EN P+        G +R  FW+G+V N++LVD LVS+SD+VVH AAESHVTRSI+DN++FF+TDVLGTQ +ANAV+ + +KV+RF+HISTSEVYGTA    M+EEH+L PMSPYASAK GADRLVYSYWATY IPA+IIRPFNN+G YQHLEK +PRFIT+CILGEPLT+HG+G AARDWLFV DHC ALD  LH  A+K+ GE INLGTG
Sbjct:    1 MKTILVTGGAGFIGSNFVRYLYNKYPDYRIIVLDVLTYAGNVENSPEGAF-----GSSRYEFWHGDVRNSDLVDTLVSQSDSVVHMAAESHVTRSIFDNRLFFDTDVLGTQSVANAVVKHCNKVERFVHISTSEVYGTAQTAKMNEEHSLNPMSPYASAKCGADRLVYSYWATYHIPAVIIRPFNNFGPYQHLEKAIPRFITSCILGEPLTIHGDGSAARDWLFVADHCEALDTVLHVDADKIVGEAINLGTG 248          
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: A0A1G1GV58_9BACT (dTDP-glucose 4,6-dehydratase n=1 Tax=Nitrospirae bacterium RBG_13_41_22 TaxID=1801704 RepID=A0A1G1GV58_9BACT)

HSP 1 Score: 385 bits (989), Expect = 5.830e-132
Identity = 183/253 (72.33%), Postives = 211/253 (83.40%), Query Frame = 1
Query:    4 KTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINLGTGI 762
            KTILVTGGAGF+G NFVRY+ KKYPDYR+IVLD LTYAG+ ENLP   ++     D RL+FWYGNV N ELVD LVS+SD VVHFAAE+HVTRSIYDN IFFETDVLGTQ +ANAVL Y+DK++R IHISTSEVYGTAL  +MDEEH L P SPYASAKAGADRLVYSYWATY++P +IIRPFNNYG YQHLEK VPRFIT+C+L E L VHG+G A+RD++FV D C A+D  +HA  +KV+GEV N+ TGI
Sbjct:    3 KTILVTGGAGFMGCNFVRYLYKKYPDYRIIVLDALTYAGSVENLP---VNINENNDNRLIFWYGNVRNGELVDTLVSQSDVVVHFAAETHVTRSIYDNYIFFETDVLGTQTVANAVLKYKDKIERLIHISTSEVYGTALKELMDEEHPLMPTSPYASAKAGADRLVYSYWATYELPMVIIRPFNNYGPYQHLEKAVPRFITSCLLDEHLRVHGDGSASRDYIFVGDVCKAIDIVIHADIDKVKGEVFNVATGI 252          
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: UPI00040AA8DA (GDP-mannose 4,6-dehydratase n=1 Tax=Methylocapsa acidiphila TaxID=133552 RepID=UPI00040AA8DA)

HSP 1 Score: 383 bits (983), Expect = 4.290e-131
Identity = 176/256 (68.75%), Postives = 213/256 (83.20%), Query Frame = 1
Query:    1 VKTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINLGTGISV 768
            +KT+L+TGGAGFIGSNFVR+I +KYPDY+++VLD LTYAG+  NLP+   D       R  FWYGNV NA++VD LVS SD V+HFAAESHVTRSI+DN++FFETDVLGTQV+AN+VL +RD+V+ F+HISTSEVYGTA   +MDE+H L PMSPYA+AK GADRLVYSYW TY+IP +IIRPFNN+G +QHLEKV+PRF+T+C+LGEPL VHG+G A RD+LFVQDHC ALDK +HA   K+ GEV NLGTG  V
Sbjct:    1 MKTLLITGGAGFIGSNFVRHIYRKYPDYKILVLDALTYAGSITNLPENSFDSD-----RFEFWYGNVLNADVVDSLVSRSDIVLHFAAESHVTRSIFDNRLFFETDVLGTQVVANSVLRHRDRVELFVHISTSEVYGTATGSIMDEDHPLNPMSPYAAAKCGADRLVYSYWMTYRIPTVIIRPFNNFGPFQHLEKVIPRFVTSCLLGEPLNVHGDGSARRDFLFVQDHCDALDKLIHAERSKIIGEVFNLGTGRDV 251          
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: A0A1G1DD88_9BACT (dTDP-glucose 4,6-dehydratase n=1 Tax=Nitrospinae bacterium RIFCSPLOWO2_01_FULL_39_10 TaxID=1801683 RepID=A0A1G1DD88_9BACT)

HSP 1 Score: 380 bits (976), Expect = 5.150e-130
Identity = 179/256 (69.92%), Postives = 211/256 (82.42%), Query Frame = 1
Query:    1 VKTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINLGTGISV 768
            +KTIL+TGGAGFIGSNFV++I  KYPDYR+IVLD LTYAGN +N      D+     +R VFWYGNV N EL+D+LVS+SD V+HFAAESHV RSI+DN IF+ETDV+GTQV+AN+VL Y  K++RFIHIS+SEVYGTAL   M EEH L P SPYASAKAGADRLVYSYWATY IPA+IIRPFNNYG +QHLEKV+PRFIT+ IL EPLTVHG+G+  RDW+FV+D C A++KALH    KV GEVIN+GTG S+
Sbjct:    2 MKTILITGGAGFIGSNFVKFIYNKYPDYRIIVLDALTYAGNTDNFLDSMKDN-----SRFVFWYGNVRNGELIDELVSQSDVVIHFAAESHVARSIFDNMIFYETDVIGTQVVANSVLKYNGKIERFIHISSSEVYGTALSEPMTEEHPLNPKSPYASAKAGADRLVYSYWATYDIPAIIIRPFNNYGPHQHLEKVIPRFITSAILNEPLTVHGDGKNERDWVFVEDCCNAVNKALHCDLNKVRGEVINIGTGRSI 252          
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Match: A0A1F8AYT6_9BACT (Epimerase (Fragment) n=1 Tax=Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_46_16 TaxID=1802513 RepID=A0A1F8AYT6_9BACT)

HSP 1 Score: 375 bits (964), Expect = 1.050e-129
Identity = 179/244 (73.36%), Postives = 206/244 (84.43%), Query Frame = 1
Query:    4 KTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHIDHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNKIFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHALKPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRFITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEG 735
            KTILVTGGAGFIGSNFVR+I  KYPDYR+IVLD LTYAG+ ENLP   I+  G  + RL FWYGNV N ELVD LVS+SD V HFAAE+HVTRSIYDN +FFETDVLGTQ IANAVL YRD+++RFIHISTSEVYGTA   +MDE+H L PMSPYA+AKAGADRLVYSYWATY++PA+IIRPFNNYG YQHLEK  PRFIT+CIL EP+ VHG+G AARD++FV+D C A+D  +HA  +KV+G
Sbjct:    3 KTILVTGGAGFIGSNFVRHIYNKYPDYRIIVLDALTYAGSIENLP---ININGNSNERLSFWYGNVKNGELVDTLVSQSDIVAHFAAETHVTRSIYDNFLFFETDVLGTQTIANAVLKYRDRIERFIHISTSEVYGTAQKELMDEDHPLMPMSPYAAAKAGADRLVYSYWATYELPAVIIRPFNNYGPYQHLEKATPRFITSCILDEPIRVHGDGSAARDYIFVEDVCKAVDIIMHADIKKVKG 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14697.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9PPU1_9BACT1.450e-14476.95NAD-dependent epimerase/dehydratase family protein... [more]
A0A7X9AES7_9BURK4.060e-14274.90NAD-dependent epimerase/dehydratase family protein... [more]
A0A679HH27_9BACT1.410e-13975.89dTDP-glucose 4,6-dehydratase n=1 Tax=Nitrospira sp... [more]
A0A532D110_9BACT2.330e-13774.70NAD-dependent epimerase/dehydratase family protein... [more]
A0A3D5Y925_9DELT3.060e-13473.52Epimerase n=2 Tax=unclassified Deltaproteobacteria... [more]
A0A2V9J4B9_9BACT7.780e-13371.94Epimerase n=2 Tax=Acidobacteria bacterium TaxID=19... [more]
A0A1G1GV58_9BACT5.830e-13272.33dTDP-glucose 4,6-dehydratase n=1 Tax=Nitrospirae b... [more]
UPI00040AA8DA4.290e-13168.75GDP-mannose 4,6-dehydratase n=1 Tax=Methylocapsa a... [more]
A0A1G1DD88_9BACT5.150e-13069.92dTDP-glucose 4,6-dehydratase n=1 Tax=Nitrospinae b... [more]
A0A1F8AYT6_9BACT1.050e-12973.36Epimerase (Fragment) n=1 Tax=Candidatus Woesebacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14697contigP-wetherbeei_contig14697:918..1685 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog395964.KE386496_gene1249
Preferred namerfbB
PFAMsGDP_Man_Dehyd
Model size768
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00289,RC00402
KEGG koko:K01710,ko:K01784,ko:K12450
KEGG ReactionR00291,R00293,R02984,R06513
KEGG Pathwayko00052,ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00052,map00520,map00521,map00523,map00525,map01055,map01100,map01130
KEGG ModuleM00361,M00362,M00632,M00793
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.46e-132
EggNOG OGsCOG1088@1|root,COG1088@2|Bacteria,1MU5E@1224|Proteobacteria,2TT5T@28211|Alphaproteobacteria,3NA8Y@45404|Beijerinckiaceae
EC4.2.1.46,4.2.1.76,5.1.3.2
DescriptionMale sterility protein
Cds size768
COG categoryM
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186030.547078-CDS-P-wetherbeei_contig14697:917..16851683186030.547078-CDS-P-wetherbeei_contig14697:917..1685Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14697 918..1685 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14697.2.1prot_P-wetherbeei_contig14697.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14697 918..1685 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14697.2.1

>prot_P-wetherbeei_contig14697.2.1 ID=prot_P-wetherbeei_contig14697.2.1|Name=mRNA_P-wetherbeei_contig14697.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
VKTILVTGGAGFIGSNFVRYILKKYPDYRVIVLDLLTYAGNPENLPQEHI
DHKGEGDARLVFWYGNVTNAELVDKLVSESDAVVHFAAESHVTRSIYDNK
IFFETDVLGTQVIANAVLSYRDKVKRFIHISTSEVYGTALDHVMDEEHAL
KPMSPYASAKAGADRLVYSYWATYKIPALIIRPFNNYGAYQHLEKVVPRF
ITACILGEPLTVHGEGEAARDWLFVQDHCAALDKALHAPAEKVEGEVINL
GTGISV
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mRNA from alignment at P-wetherbeei_contig14697:918..1685+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14697.2.1 ID=mRNA_P-wetherbeei_contig14697.2.1|Name=mRNA_P-wetherbeei_contig14697.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig14697:918..1685+ (Phaeothamnion wetherbeei SAG_119_79)
GTGAAAACGATTTTAGTCACCGGTGGCGCCGGTTTCATTGGAAGTAACTT CGTCCGTTACATCCTCAAAAAATACCCCGACTACCGCGTGATTGTGTTGG ATTTGCTCACCTACGCAGGCAATCCCGAGAATTTGCCTCAGGAGCATATC GACCATAAAGGCGAAGGCGACGCCCGCCTCGTTTTCTGGTATGGCAATGT CACAAATGCCGAGCTCGTCGACAAGCTCGTCTCCGAGAGCGATGCCGTCG TGCATTTTGCCGCCGAGAGCCACGTAACGCGCTCGATTTACGATAACAAG ATTTTCTTCGAAACCGATGTGCTCGGCACTCAGGTTATCGCCAACGCCGT CCTGTCCTATCGAGACAAGGTGAAGCGGTTCATCCATATTTCGACTTCGG AAGTCTACGGCACCGCCCTCGACCATGTTATGGACGAGGAGCACGCGCTT AAGCCGATGAGCCCCTACGCCAGCGCCAAAGCCGGCGCAGACCGCCTGGT CTACAGCTACTGGGCAACTTACAAGATCCCCGCCCTTATTATTCGCCCGT TCAACAACTACGGCGCTTACCAGCACCTCGAGAAAGTCGTTCCGCGCTTC ATCACCGCATGTATCCTGGGTGAACCCCTCACCGTTCACGGCGAAGGCGA AGCCGCCCGCGACTGGCTGTTTGTGCAGGACCACTGCGCCGCTCTCGATA AGGCGCTTCACGCCCCGGCTGAAAAAGTCGAGGGCGAAGTCATCAACCTG GGCACTGGAATCAGCGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14697:918..1685+

>mRNA_P-wetherbeei_contig14697.2.1 ID=mRNA_P-wetherbeei_contig14697.2.1|Name=mRNA_P-wetherbeei_contig14697.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig14697:918..1685+ (Phaeothamnion wetherbeei SAG_119_79)
GTGAAAACGATTTTAGTCACCGGTGGCGCCGGTTTCATTGGAAGTAACTT
CGTCCGTTACATCCTCAAAAAATACCCCGACTACCGCGTGATTGTGTTGG
ATTTGCTCACCTACGCAGGCAATCCCGAGAATTTGCCTCAGGAGCATATC
GACCATAAAGGCGAAGGCGACGCCCGCCTCGTTTTCTGGTATGGCAATGT
CACAAATGCCGAGCTCGTCGACAAGCTCGTCTCCGAGAGCGATGCCGTCG
TGCATTTTGCCGCCGAGAGCCACGTAACGCGCTCGATTTACGATAACAAG
ATTTTCTTCGAAACCGATGTGCTCGGCACTCAGGTTATCGCCAACGCCGT
CCTGTCCTATCGAGACAAGGTGAAGCGGTTCATCCATATTTCGACTTCGG
AAGTCTACGGCACCGCCCTCGACCATGTTATGGACGAGGAGCACGCGCTT
AAGCCGATGAGCCCCTACGCCAGCGCCAAAGCCGGCGCAGACCGCCTGGT
CTACAGCTACTGGGCAACTTACAAGATCCCCGCCCTTATTATTCGCCCGT
TCAACAACTACGGCGCTTACCAGCACCTCGAGAAAGTCGTTCCGCGCTTC
ATCACCGCATGTATCCTGGGTGAACCCCTCACCGTTCACGGCGAAGGCGA
AGCCGCCCGCGACTGGCTGTTTGTGCAGGACCACTGCGCCGCTCTCGATA
AGGCGCTTCACGCCCCGGCTGAAAAAGTCGAGGGCGAAGTCATCAACCTG
GGCACTGGAATCAGCGTC
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