mRNA_P-wetherbeei_contig14651.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14651.2.1
Unique NamemRNA_P-wetherbeei_contig14651.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14651.2.1 vs. uniprot
Match: A0A7X3ZNE1_9BACT (DUF3857 domain-containing protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3ZNE1_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 1.410e-8
Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 1 
Query:  127 NAPGASQYPQAPGLLLQDSISFRAQADGSNEFEEHDVIKVLNDQGVQEHRELLRVYQSENESIEVKRACTILPDGRVLDLPKQAIID--EPLMPTSSAYKGLHKFEIHFPGVKPNAIVEFHLVTRRK 501
            N+P AS+YP A  L+L +  S    + G + +  H V+K+LN++G+Q++ ++   YQ  +++I V  A TI PDG V   P +A  D   P + + + Y       I   G+KP   +E+ +    K
Sbjct:  291 NSPTASEYPDADVLILFNHFSHDVLSTGQSRYTTHQVVKLLNERGIQKYGDIAIPYQPNSQNIGVNIARTIDPDGNVYLPPDEAYNDVTPPGLLSYNLYSDQLWRVISMVGLKPGVCIEYKVTLEDK 417
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BLAST of mRNA_P-wetherbeei_contig14651.2.1 vs. uniprot
Match: A0A660SI48_9BACT (DUF3857 domain-containing protein (Fragment) n=1 Tax=candidate division WOR-3 bacterium TaxID=2052148 RepID=A0A660SI48_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 8.790e-6
Identity = 35/114 (30.70%), Postives = 59/114 (51.75%), Query Frame = 1 
Query:  148 YPQAPGLLLQDSISFRAQADGSNEFEEHDVIKVLNDQGVQEHRELLRVYQSENESIEVKRACTILPDGRVLDLPKQAIIDEPLMPTSSAYK----GLHKFEIHFPGVKPNAIVE 477
            YP++ G+ + DS +     DGS     H ++KVLN  G +E  ++   Y +  ++I +K+A  I PDG+++ + ++ + D P MP     K     L    I FP V+P   +E
Sbjct:   31 YPESNGVYIFDSTNITLNPDGSGRLIRHYLVKVLNPAGTREFSQVSFSYITLYDTILLKKAVVIKPDGKIVKVTEKDVEDIP-MPAWEGSKFLIPNLRILRITFPEVEPGCAIE 143
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14651.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7X3ZNE1_9BACT1.410e-831.50DUF3857 domain-containing protein n=1 Tax=Candidat... [more]
A0A660SI48_9BACT8.790e-630.70DUF3857 domain-containing protein (Fragment) n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14651contigP-wetherbeei_contig14651:1122..1643 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog309799.DICTH_0562
PFAMsDUF3857,DUF3858,Transglut_core
Model size522
Max annot lvl2|Bacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue0.000221
EggNOG OGsCOG0457@1|root,COG1305@1|root,COG0457@2|Bacteria,COG1305@2|Bacteria
DescriptionTransglutaminase-like superfamily
Cds size504
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186028.9591591-UTR-P-wetherbeei_contig14651:1121..11391683186028.9591591-UTR-P-wetherbeei_contig14651:1121..1139Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14651 1122..1139 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186028.968532-CDS-P-wetherbeei_contig14651:1139..16431683186028.968532-CDS-P-wetherbeei_contig14651:1139..1643Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14651 1140..1643 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14651.2.1prot_P-wetherbeei_contig14651.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14651 1140..1643 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14651.2.1

>prot_P-wetherbeei_contig14651.2.1 ID=prot_P-wetherbeei_contig14651.2.1|Name=mRNA_P-wetherbeei_contig14651.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp
MKRWITAACFSLAMALPSASQEIPAGVKLPTDQRFQNAPGASQYPQAPGL
LLQDSISFRAQADGSNEFEEHDVIKVLNDQGVQEHRELLRVYQSENESIE
VKRACTILPDGRVLDLPKQAIIDEPLMPTSSAYKGLHKFEIHFPGVKPNA
IVEFHLVTRRKPNPDKK*
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mRNA from alignment at P-wetherbeei_contig14651:1122..1643+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14651.2.1 ID=mRNA_P-wetherbeei_contig14651.2.1|Name=mRNA_P-wetherbeei_contig14651.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig14651:1122..1643+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGTAACTTTTGCCCTTATGAAACGCTGGATTACGGCGGCCTGTTTTAG
TCTCGCGATGGCTCTGCCGTCCGCGTCTCAGGAGATCCCGGCGGGGGTCA
AACTCCCCACGGACCAGCGCTTCCAAAACGCGCCCGGAGCCAGCCAGTAT
CCGCAAGCGCCGGGGCTGTTGCTGCAAGACAGCATCTCTTTCCGGGCCCA
GGCCGACGGCTCCAACGAGTTCGAAGAGCACGACGTCATCAAGGTCCTCA
ACGACCAGGGCGTGCAGGAGCACCGCGAGCTGCTGCGCGTCTATCAGAGT
GAAAACGAGAGCATCGAGGTGAAACGGGCGTGCACCATCCTGCCCGACGG
TCGCGTGCTCGATCTCCCCAAGCAGGCCATCATCGACGAGCCCCTGATGC
CCACGTCGAGCGCCTACAAGGGCCTTCACAAGTTTGAGATCCATTTTCCG
GGCGTGAAGCCCAACGCTATCGTCGAATTCCATCTGGTAACGCGACGCAA
GCCCAATCCCGACAAAAAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14651:1122..1643+

>mRNA_P-wetherbeei_contig14651.2.1 ID=mRNA_P-wetherbeei_contig14651.2.1|Name=mRNA_P-wetherbeei_contig14651.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig14651:1122..1643+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACGCTGGATTACGGCGGCCTGTTTTAGTCTCGCGATGGCTCTGCC
GTCCGCGTCTCAGGAGATCCCGGCGGGGGTCAAACTCCCCACGGACCAGC
GCTTCCAAAACGCGCCCGGAGCCAGCCAGTATCCGCAAGCGCCGGGGCTG
TTGCTGCAAGACAGCATCTCTTTCCGGGCCCAGGCCGACGGCTCCAACGA
GTTCGAAGAGCACGACGTCATCAAGGTCCTCAACGACCAGGGCGTGCAGG
AGCACCGCGAGCTGCTGCGCGTCTATCAGAGTGAAAACGAGAGCATCGAG
GTGAAACGGGCGTGCACCATCCTGCCCGACGGTCGCGTGCTCGATCTCCC
CAAGCAGGCCATCATCGACGAGCCCCTGATGCCCACGTCGAGCGCCTACA
AGGGCCTTCACAAGTTTGAGATCCATTTTCCGGGCGTGAAGCCCAACGCT
ATCGTCGAATTCCATCTGGTAACGCGACGCAAGCCCAATCCCGACAAAAA
GTAG
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