prot_P-wetherbeei_contig14624.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14624.1.1
Unique Nameprot_P-wetherbeei_contig14624.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length56
Homology
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BLAST of mRNA_P-wetherbeei_contig14624.1.1 vs. uniprot
Match: D8LQ09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ09_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 7.550e-7
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0 
Query:    8 VRGYDPVSGVVIVRASRETHRMVWAALTFMSSFKKLVVSANVRAVAG 54
            VR +D  SGV ++RA RE+HRMV A+LT +S  K   +S  V+AVAG
Sbjct:   55 VRSFDRTSGVCVIRAGRESHRMVRASLTLLSGTKDARLSVTVKAVAG 101
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14624.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ09_ECTSI7.550e-753.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038085RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamilyGENE3D3.30.70.3250Ribonuclease P, Pop5 subunitcoord: 2..55
e-value: 1.7E-9
score: 39.7
IPR038085RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamilySUPERFAMILY160350Rnp2-likecoord: 5..54
IPR002759RNase P subunit Pop5/Rpp14/Rnp2-likePFAMPF01900RNase_P_Rpp14coord: 8..54
e-value: 3.4E-9
score: 36.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14624contigP-wetherbeei_contig14624:1483..1650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14624.1.1mRNA_P-wetherbeei_contig14624.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14624 1483..1650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14624.1.1 ID=prot_P-wetherbeei_contig14624.1.1|Name=mRNA_P-wetherbeei_contig14624.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=56bp
MYGWNPAVRGYDPVSGVVIVRASRETHRMVWAALTFMSSFKKLVVSANVR
AVAGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038085Rnp2-like_sf
IPR002759Pop5/Rpp14/Rnp2-like