mRNA_P-wetherbeei_contig14615.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14615.1.1
Unique NamemRNA_P-wetherbeei_contig14615.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: A0A521XA75_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XA75_9PROT)

HSP 1 Score: 596 bits (1537), Expect = 8.510e-213
Identity = 292/370 (78.92%), Postives = 317/370 (85.68%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEAQALPAAAARLLEDRRRHAAAD 1110
            MKF +   DG ARRG L L HG ++TP FMPVGTYGTVKAMSP EL GIGA++VLGNTFHLWLRPGLEV+A HGGLHRFMGWD PILTDSGGFQVFSLGA+RKISEEGV+FASP+NGDR+MLTPEESMRIQRVLD+DI MIFDECTP PA E+E  +SMRLSLRWA RS+ +H+GNPNALFGIVQGGM E LRDESLAGLE IGFDGYAIGGLSVGEPK DM+RILAHTAP+LPA KPRYLMGVGTPEDL+  V+AGIDMFDCVLPTRNARNGWLFTR GD+KI+NA +R DT  LDA CGCYCCT+FTRAYLHHL R NEILGARL T+HNLYYYL LMRELRAAI A  L A  A   E R     AD
Sbjct:    1 MKFLVHNIDGRARRGTLSLTHGRVQTPAFMPVGTYGTVKAMSPAELHGIGAEIVLGNTFHLWLRPGLEVIAAHGGLHRFMGWDGPILTDSGGFQVFSLGALRKISEEGVQFASPVNGDRMMLTPEESMRIQRVLDADIAMIFDECTPFPADEREAGESMRLSLRWAERSKRSHDGNPNALFGIVQGGMHETLRDESLAGLERIGFDGYAIGGLSVGEPKHDMRRILAHTAPQLPADKPRYLMGVGTPEDLVEAVAAGIDMFDCVLPTRNARNGWLFTRHGDIKIKNAAHRADTRALDAGCGCYCCTHFTRAYLHHLHRVNEILGARLNTIHNLYYYLTLMRELRAAIAAGGLAAYTAAFREQRESGKEAD 370
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: A0A2U1RY25_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A2U1RY25_9PROT)

HSP 1 Score: 595 bits (1534), Expect = 1.820e-212
Identity = 287/363 (79.06%), Postives = 315/363 (86.78%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEAQALPAAAARLLEDR 1089
            MKF LLATDGAARRG L LAHG +ETP FMPVGTYGTVKAMSP+EL  +GA +VLGNTFHLWLRPGLEV+A HGGLHRFMGWD PILTDSGGFQV+SLG +RK+SEEGV F SP+NGDRL LTPE+SMRIQRVLDSDIVMIFDECT +PAT  E A SMRLSLRWA RS+ AHEGN NALFGIVQGGM E LRDESL GL +IGFDGYAIGGLSVGEPKEDM RILAHTAPRLPA +PRYLMGVGTPEDL+  V+AG+D+FDCV+PTRNARNGWLFTRFGDVKI+NAR+R DTGPLD TCGC+ C +F+RAYLHHL RANEILGARL T+HNL+YY  LMRE+R AI A + PA   R   DR
Sbjct:    1 MKFDLLATDGAARRGTLTLAHGQVETPAFMPVGTYGTVKAMSPDELVEVGAHIVLGNTFHLWLRPGLEVIAAHGGLHRFMGWDRPILTDSGGFQVYSLGPLRKVSEEGVAFQSPVNGDRLFLTPEDSMRIQRVLDSDIVMIFDECTAYPATRDEAAASMRLSLRWAARSKXAHEGNANALFGIVQGGMHEDLRDESLGGLREIGFDGYAIGGLSVGEPKEDMARILAHTAPRLPADRPRYLMGVGTPEDLVDAVAAGVDLFDCVMPTRNARNGWLFTRFGDVKIKNARHRADTGPLDETCGCHACRHFSRAYLHHLHRANEILGARLNTIHNLFYYQALMREMREAIAAGSFPAFRERFRRDR 363
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: UPI001ACF1DAB (Queuine tRNA-ribosyltransferase n=2 Tax=Betaproteobacteria TaxID=28216 RepID=UPI001ACF1DAB)

HSP 1 Score: 592 bits (1527), Expect = 1.760e-211
Identity = 285/349 (81.66%), Postives = 308/349 (88.25%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEA 1047
            M+F LLATDGAARRGRL LAHG ++TP FMPVGTYG VKAM+P+E+  +GAQ+VLGNTFHLWLRPGLEV+A HGGLHRFMGWD PILTDSGGFQVFSLGA+RKISEEGV+FASP+NGDRL LTPEESMRIQRVL++D+VMIFDECTPHPAT  E A SMRLSLRWA RSR AHEGNPNALFGIVQGGMFE LRDESLAGL  IGFDGYAIGGLSVGEPK DM+RILAHTAPRLP  +PRYLMGVGTPEDL+  V+ GIDMFDCVLPTRNARNGWLFTR G VKIRNA +  DT PLD TC CY C NF+RAYLHHLQR NEILGARL T+HNL+YY QLM ELR AI A
Sbjct:    1 MRFELLATDGAARRGRLTLAHGAVDTPAFMPVGTYGAVKAMAPDEVKALGAQIVLGNTFHLWLRPGLEVIAAHGGLHRFMGWDGPILTDSGGFQVFSLGALRKISEEGVKFASPVNGDRLFLTPEESMRIQRVLNADVVMIFDECTPHPATHAEAAKSMRLSLRWAERSRRAHEGNPNALFGIVQGGMFEDLRDESLAGLAQIGFDGYAIGGLSVGEPKSDMRRILAHTAPRLPRERPRYLMGVGTPEDLVNAVAQGIDMFDCVLPTRNARNGWLFTRRGTVKIRNAAHAADTRPLDGTCACYTCRNFSRAYLHHLQRVNEILGARLNTLHNLFYYQQLMAELRQAIAA 349
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: A0A1F4C7F2_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4C7F2_9PROT)

HSP 1 Score: 592 bits (1526), Expect = 3.350e-211
Identity = 287/357 (80.39%), Postives = 313/357 (87.68%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEAQALPAAAA 1071
            MKF +  +DG ARRG L LAHG +ETP FMPVGTYG+VKAMSP EL  IGAQ+VLGNTFHLWLRPGL+V+  HGGLHRFMGWDAP+LTDSGGFQVFSLGA+RKISEEGV+FASP+NGDRL+LTPEESMRIQRVL++DI MIFDECTP+PA E+E  +SMRLSLRWA RS+ AH GNPNALFGIVQGGM E LRDESLAGLE IGFDGYAIGGLSVGEPK+DM RILAHTA +LPA KPRYLMGVGTPEDL+  V+AGIDMFDCVLPTRNARNGWLFTR GD+KI+NA +R DT PLDA CGCYCC +FTRAYLHHL   NEILGARL TMHNLYYYL LMRELRAAI A  L A AA
Sbjct:    1 MKFLVHNSDGRARRGTLTLAHGQVETPAFMPVGTYGSVKAMSPAELHEIGAQIVLGNTFHLWLRPGLDVIGAHGGLHRFMGWDAPVLTDSGGFQVFSLGALRKISEEGVKFASPVNGDRLLLTPEESMRIQRVLNADIAMIFDECTPYPADEREAGESMRLSLRWAERSKGAHAGNPNALFGIVQGGMHETLRDESLAGLERIGFDGYAIGGLSVGEPKQDMLRILAHTAAQLPADKPRYLMGVGTPEDLVEAVTAGIDMFDCVLPTRNARNGWLFTRHGDIKIKNAAHRHDTRPLDADCGCYCCAHFTRAYLHHLHHVNEILGARLNTMHNLYYYLSLMRELRAAIAAGGLAAYAA 357
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: A0A363SGT2_9RHOO (Queuine tRNA-ribosyltransferase n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A363SGT2_9RHOO)

HSP 1 Score: 591 bits (1524), Expect = 4.510e-211
Identity = 287/349 (82.23%), Postives = 308/349 (88.25%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEA 1047
            MKF LLATDGAARRGRL LAHG ++TP FMPVGTYG+VKAM+P+E+ G+GAQ+VLGNTFHLWLRPGLEV+A HGGLHRFMGWD PILTDSGGFQVFSLGA+RKISEEGV+FASP+NGDRL LTPEESMRIQRVL+SD+VMIFDECTP+PAT  E A SMRLSLRWA RSR AHEGNPNALFGIVQGGM E LRDESLAGL  IGFDGYAIGGLSVGEPK DMQRILAHTAPRLP  +PRYLMGVGTPEDL+  V+ GIDMFDCVLPTRNARNGWLFT  G VKIRNA +  DT PLD TC CY C NFTRAYLHHLQR NEILGARL T+HNL+YY QLM ELR AI A
Sbjct:    1 MKFELLATDGAARRGRLTLAHGIVDTPAFMPVGTYGSVKAMAPDEVKGLGAQIVLGNTFHLWLRPGLEVIAAHGGLHRFMGWDGPILTDSGGFQVFSLGALRKISEEGVKFASPVNGDRLFLTPEESMRIQRVLNSDVVMIFDECTPYPATHAEAAKSMRLSLRWAERSRRAHEGNPNALFGIVQGGMHEDLRDESLAGLLQIGFDGYAIGGLSVGEPKADMQRILAHTAPRLPQERPRYLMGVGTPEDLVNAVAQGIDMFDCVLPTRNARNGWLFTHHGTVKIRNAAHAADTRPLDETCPCYTCRNFTRAYLHHLQRVNEILGARLNTLHNLFYYQQLMAELREAIAA 349
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: A0A1F3ZXZ6_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 TaxID=1797484 RepID=A0A1F3ZXZ6_9PROT)

HSP 1 Score: 585 bits (1508), Expect = 1.370e-208
Identity = 286/365 (78.36%), Postives = 312/365 (85.48%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEAQALPAAAARLLEDRRR 1095
            M F+L+  DG ARRGR+ LAHG ++TP FMPVGTYG VKAMSP EL  IGAQ+VLGNTFHLWLRPGLEV+A HGGLHRFMGW APILTDSGGFQVFSLG MR ISEEGVRFASPINGDRL+LTPEESMRIQRVLDSDIVMIFDECTPHPA+E +TA SM+LSLRWA RS+ AH GN NALFGIVQGGMFE  RD SL GL+ +GFDGYAIGGLSVGEPK+DM+RILAHTAPRLPA  PRYLMGVGTPED++  V  GIDMFDCVLPTRNARNGWLFTR+GD+KIRNARY+ DTGPLD TCGC  C +F+R YLHHLQ+  EILGAR  T+HNLY+YL LMRELR AI A A  A AAR   DR R
Sbjct:    1 MIFTLMHEDGQARRGRIALAHGVLDTPAFMPVGTYGAVKAMSPAELTQIGAQIVLGNTFHLWLRPGLEVIAAHGGLHRFMGWQAPILTDSGGFQVFSLGEMRSISEEGVRFASPINGDRLILTPEESMRIQRVLDSDIVMIFDECTPHPASEDQTASSMQLSLRWAERSKRAHAGNSNALFGIVQGGMFENQRDASLEGLKSLGFDGYAIGGLSVGEPKQDMRRILAHTAPRLPATHPRYLMGVGTPEDIVHAVGLGIDMFDCVLPTRNARNGWLFTRYGDIKIRNARYQGDTGPLDDTCGCTTCGSFSRGYLHHLQKTGEILGARFNTLHNLYFYLTLMRELREAIAAGAFGAYAARFARDRSR 365
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: A0A840MYQ0_9PROT (Queuine tRNA-ribosyltransferase n=2 Tax=Chitinivorax TaxID=1433992 RepID=A0A840MYQ0_9PROT)

HSP 1 Score: 585 bits (1508), Expect = 1.650e-208
Identity = 284/365 (77.81%), Postives = 319/365 (87.40%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHE--GNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEAQALPAAAARLLEDR 1089
            MKF+L  TDGAARRG LEL HG IETPVFMPVGTYG+VKAMSP EL  IGAQ+VLGNTFHLWLRPGL+V+A HGGLH FMGW+ PILTDSGGFQVFSLG +RKI+E+GV+F+SP+NGD+L LTPEESMRIQRVL+SDIVMIFDECTP+PAT QE ADSMRLSLRWARRSRD  +   NPNALFGIVQGGM+E LRDESL GL+ I F G+A+GGLSVGEPKEDM+RIL+HTAP+LPA KPRYLMGVGTPEDL+  VS GIDMFDCV+PTRNARNGWLFTRFGD+KIRNARY+ DT PLD TC CY CT+FTRAYLHHLQR NEILGARL T+HNLYYY QLMR++RAAI+     A  A+  ++R
Sbjct:    1 MKFTLHKTDGAARRGTLELIHGRIETPVFMPVGTYGSVKAMSPHELHDIGAQIVLGNTFHLWLRPGLDVIAAHGGLHDFMGWNKPILTDSGGFQVFSLGELRKITEQGVKFSSPVNGDKLFLTPEESMRIQRVLNSDIVMIFDECTPYPATRQEAADSMRLSLRWARRSRDEFDRLANPNALFGIVQGGMYEDLRDESLEGLQGIDFHGFAVGGLSVGEPKEDMERILSHTAPKLPANKPRYLMGVGTPEDLVYAVSKGIDMFDCVMPTRNARNGWLFTRFGDIKIRNARYKLDTKPLDETCACYTCTHFTRAYLHHLQRVNEILGARLNTIHNLYYYQQLMRDIRAAIDNDQFEAFRAQFRDER 365
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: A0A6M4H9N7_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4H9N7_9PROT)

HSP 1 Score: 585 bits (1507), Expect = 2.020e-208
Identity = 288/367 (78.47%), Postives = 310/367 (84.47%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEAQALPAAAARLLEDRRRHA 1101
            MKF+L ATDG ARRG L LAHG ++TP FMPVGTYGTVKAMSP EL  IGA +VLGNTFHLWLRPGLEV+  H GLHRFMGW  PILTDSGGFQVFSLGAMRKISEEGV F SPINGD+L LTPEESM IQ+ LDSDIVMIFDEC   PAT  ETADSMRLSLRWA RS+ AHEGN NALFGIVQGGM E LRDESL  L  IGFDGYAIGGLSVGEPKEDM+R+L+HTAPRLPA +PRYLMGVGTPEDL+ GVS GIDMFDCV+PTRNARNGWLFTRFGDVKI+NAR+REDT PLD+TC CY C NFTRAYLHHL RANEILGARL T+HNL+YYL LMRE+R AIE       +AR   +R R A
Sbjct:    1 MKFTLRATDGPARRGTLTLAHGEVQTPAFMPVGTYGTVKAMSPAELVEIGADIVLGNTFHLWLRPGLEVIRAHQGLHRFMGWKGPILTDSGGFQVFSLGAMRKISEEGVAFQSPINGDKLFLTPEESMAIQKTLDSDIVMIFDECIGLPATRDETADSMRLSLRWAERSKRAHEGNANALFGIVQGGMHEDLRDESLGALATIGFDGYAIGGLSVGEPKEDMERVLSHTAPRLPADRPRYLMGVGTPEDLVMGVSRGIDMFDCVMPTRNARNGWLFTRFGDVKIKNARHREDTQPLDSTCACYTCRNFTRAYLHHLHRANEILGARLNTIHNLHYYLDLMREMRKAIEGGLWSEFSARFARERSREA 367
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: A0A2N2TNB6_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-14 TaxID=2013705 RepID=A0A2N2TNB6_9PROT)

HSP 1 Score: 584 bits (1505), Expect = 3.520e-208
Identity = 284/349 (81.38%), Postives = 305/349 (87.39%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEA 1047
            MKF+LLATDGAARRG+L LAHG ++TP FMPVGTYG+VKAM+P+E+  +GAQ+VLGNTFHLWLRPGLEV+A H GLHRFMGWD PILTDSGGFQVFSLGA+RKISEEGVRFASP+NGDRL LTPEESMRIQRVL+SDIVMIFDECTP+PA   E   SMRLSLRWA RS+ AHEGNPNALFGIVQGGM E LRDESLAGL  IGFDGYAIGGLSVGEPK DMQRILAHTAPRLPA +PRYLMGVGTPEDL+  V  GIDMFDCVLPTRNARNGWLFTR G VKIRNA +  DT PLD TC C  C N+TRAYLHHLQR NEILGARL T+HNLYYY QLM ELR AI A
Sbjct:    1 MKFALLATDGAARRGKLSLAHGSVDTPAFMPVGTYGSVKAMAPDEVKALGAQIVLGNTFHLWLRPGLEVIAAHDGLHRFMGWDGPILTDSGGFQVFSLGALRKISEEGVRFASPVNGDRLFLTPEESMRIQRVLNSDIVMIFDECTPYPAAVDEAGKSMRLSLRWAERSKRAHEGNPNALFGIVQGGMHEDLRDESLAGLVQIGFDGYAIGGLSVGEPKADMQRILAHTAPRLPADRPRYLMGVGTPEDLVNAVQQGIDMFDCVLPTRNARNGWLFTRHGTVKIRNAVHANDTRPLDETCPCSTCRNYTRAYLHHLQRVNEILGARLNTLHNLYYYQQLMAELREAIAA 349
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BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Match: A0A1F4ELU5_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4ELU5_9PROT)

HSP 1 Score: 584 bits (1505), Expect = 4.390e-208
Identity = 285/364 (78.30%), Postives = 317/364 (87.09%), Query Frame = 1 
Query:    1 MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIGAQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGAMRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPATEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGLEDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDLIAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATCGCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEAQALPAAAARLLEDRR 1092
            MKF+L   DGAARRG LELAHG ++TP FMPVGTYG+VKAMSP EL  IGAQVVLGNTFHLWLRPGLEV+A+HGGLHRFMGW  PILTDSGGFQVFSLG +R+I+EEGV FASPINGDRL+LTPEESMRIQ VLD+D+VMIFDEC  HPA+E +TA SM+LSLRWA RSR AHEGN NALFGIVQGGM+ ALR+ SLAGL  +GFDGYAIGGLSVGEPK++  RILAHT PRLP  +PRYLMG+GTPED++  V AG+D+FDCVLPTRNARNGWLFTRFGDVKIRNAR+R +  PLD  CGCY C NFT AYLHHLQ+ANEILGARL T+HNLYYYL LMRELRAAIEA  L A AAR+L+DRR
Sbjct:    1 MKFTLSHFDGAARRGVLELAHGRVDTPAFMPVGTYGSVKAMSPAELEEIGAQVVLGNTFHLWLRPGLEVIARHGGLHRFMGWARPILTDSGGFQVFSLGKLRRITEEGVHFASPINGDRLLLTPEESMRIQHVLDADVVMIFDECLEHPASEAQTAASMQLSLRWAERSRRAHEGNRNALFGIVQGGMYAALREASLAGLTALGFDGYAIGGLSVGEPKDERSRILAHTVPRLPGDQPRYLMGMGTPEDIVEAVLAGVDLFDCVLPTRNARNGWLFTRFGDVKIRNARWRGEARPLDQGCGCYACRNFTLAYLHHLQKANEILGARLNTVHNLYYYLALMRELRAAIEAGNLAATAARILQDRR 364
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14615.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521XA75_9PROT8.510e-21378.92Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteo... [more]
A0A2U1RY25_9PROT1.820e-21279.06Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteo... [more]
UPI001ACF1DAB1.760e-21181.66Queuine tRNA-ribosyltransferase n=2 Tax=Betaproteo... [more]
A0A1F4C7F2_9PROT3.350e-21180.39Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteo... [more]
A0A363SGT2_9RHOO4.510e-21182.23Queuine tRNA-ribosyltransferase n=3 Tax=Betaproteo... [more]
A0A1F3ZXZ6_9PROT1.370e-20878.36Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteo... [more]
A0A840MYQ0_9PROT1.650e-20877.81Queuine tRNA-ribosyltransferase n=2 Tax=Chitinivor... [more]
A0A6M4H9N7_9PROT2.020e-20878.47Queuine tRNA-ribosyltransferase n=1 Tax=Usitatibac... [more]
A0A2N2TNB6_9PROT3.520e-20881.38Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteo... [more]
A0A1F4ELU5_9PROT4.390e-20878.30Queuine tRNA-ribosyltransferase n=1 Tax=Betaproteo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14615contigP-wetherbeei_contig14615:162..1277 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1000565.METUNv1_00173
Preferred nametgt
PFAMsTGT
Model size1116
Max annot lvl206389|Rhodocyclales
KEGG rclassRC00063
KEGG koko:K00773
KEGG ReactionR03789,R10209
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.51e-204
EggNOG OGsCOG0343@1|root,COG0343@2|Bacteria,1MUCA@1224|Proteobacteria,2VIRX@28216|Betaproteobacteria,2KUHH@206389|Rhodocyclales
EC2.4.2.29
DescriptionCatalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
Cds size1116
COG categoryF
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186027.762709-CDS-P-wetherbeei_contig14615:161..12771683186027.762709-CDS-P-wetherbeei_contig14615:161..1277Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14615 162..1277 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14615.1.1prot_P-wetherbeei_contig14615.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14615 162..1277 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14615.1.1

>prot_P-wetherbeei_contig14615.1.1 ID=prot_P-wetherbeei_contig14615.1.1|Name=mRNA_P-wetherbeei_contig14615.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=372bp
MKFSLLATDGAARRGRLELAHGPIETPVFMPVGTYGTVKAMSPEELAGIG
AQVVLGNTFHLWLRPGLEVVAKHGGLHRFMGWDAPILTDSGGFQVFSLGA
MRKISEEGVRFASPINGDRLMLTPEESMRIQRVLDSDIVMIFDECTPHPA
TEQETADSMRLSLRWARRSRDAHEGNPNALFGIVQGGMFEALRDESLAGL
EDIGFDGYAIGGLSVGEPKEDMQRILAHTAPRLPAGKPRYLMGVGTPEDL
IAGVSAGIDMFDCVLPTRNARNGWLFTRFGDVKIRNARYREDTGPLDATC
GCYCCTNFTRAYLHHLQRANEILGARLATMHNLYYYLQLMRELRAAIEAQ
ALPAAAARLLEDRRRHAAADG*
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mRNA from alignment at P-wetherbeei_contig14615:162..1277+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14615.1.1 ID=mRNA_P-wetherbeei_contig14615.1.1|Name=mRNA_P-wetherbeei_contig14615.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1116bp|location=Sequence derived from alignment at P-wetherbeei_contig14615:162..1277+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGTTCAGCCTCCTCGCCACGGACGGCGCTGCGCGGCGCGGTCGGCT
CGAACTCGCCCATGGCCCGATAGAGACGCCCGTGTTCATGCCGGTCGGGA
CCTACGGCACCGTCAAGGCGATGTCACCGGAGGAACTCGCCGGCATCGGG
GCGCAGGTGGTGCTCGGCAACACCTTCCACCTGTGGCTGCGGCCCGGGCT
CGAAGTCGTCGCGAAGCACGGCGGCCTGCACCGCTTCATGGGCTGGGACG
CCCCGATCCTGACCGATTCCGGCGGCTTCCAGGTCTTCAGCCTCGGCGCG
ATGAGGAAAATCTCCGAGGAGGGCGTGCGCTTCGCCTCTCCCATCAACGG
CGACAGGCTGATGCTCACGCCGGAGGAGTCGATGCGCATCCAGCGCGTGC
TCGATTCGGACATCGTGATGATCTTCGACGAATGCACGCCGCACCCGGCC
ACGGAACAGGAGACCGCCGATTCGATGCGCCTCAGCCTGCGCTGGGCCCG
GCGCTCGCGCGACGCTCACGAGGGCAACCCCAACGCACTTTTCGGCATCG
TGCAGGGCGGCATGTTCGAGGCGCTTCGCGACGAATCCCTCGCGGGACTG
GAGGACATCGGCTTCGACGGCTACGCGATCGGCGGGCTGTCGGTCGGCGA
ACCCAAGGAGGACATGCAGCGCATCCTCGCCCACACGGCACCGCGCCTGC
CGGCCGGAAAACCCCGCTACCTGATGGGGGTCGGCACGCCCGAAGACCTC
ATTGCGGGGGTGAGCGCCGGCATCGACATGTTCGACTGCGTGCTGCCGAC
GCGCAACGCGCGCAATGGCTGGCTGTTCACGCGGTTCGGCGACGTGAAGA
TCCGCAATGCCCGGTACCGCGAGGACACCGGCCCGCTTGACGCGACCTGC
GGCTGCTATTGCTGCACCAATTTCACCCGGGCCTATCTCCACCACCTGCA
ACGGGCCAACGAAATCCTCGGGGCGCGGCTGGCCACGATGCACAACCTGT
ACTACTACCTGCAACTGATGCGGGAACTCCGCGCGGCCATCGAGGCCCAA
GCCCTGCCCGCCGCCGCAGCGCGCCTGCTGGAGGATCGCCGCAGGCACGC
TGCCGCAGACGGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14615:162..1277+

>mRNA_P-wetherbeei_contig14615.1.1 ID=mRNA_P-wetherbeei_contig14615.1.1|Name=mRNA_P-wetherbeei_contig14615.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1116bp|location=Sequence derived from alignment at P-wetherbeei_contig14615:162..1277+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGTTCAGCCTCCTCGCCACGGACGGCGCTGCGCGGCGCGGTCGGCT
CGAACTCGCCCATGGCCCGATAGAGACGCCCGTGTTCATGCCGGTCGGGA
CCTACGGCACCGTCAAGGCGATGTCACCGGAGGAACTCGCCGGCATCGGG
GCGCAGGTGGTGCTCGGCAACACCTTCCACCTGTGGCTGCGGCCCGGGCT
CGAAGTCGTCGCGAAGCACGGCGGCCTGCACCGCTTCATGGGCTGGGACG
CCCCGATCCTGACCGATTCCGGCGGCTTCCAGGTCTTCAGCCTCGGCGCG
ATGAGGAAAATCTCCGAGGAGGGCGTGCGCTTCGCCTCTCCCATCAACGG
CGACAGGCTGATGCTCACGCCGGAGGAGTCGATGCGCATCCAGCGCGTGC
TCGATTCGGACATCGTGATGATCTTCGACGAATGCACGCCGCACCCGGCC
ACGGAACAGGAGACCGCCGATTCGATGCGCCTCAGCCTGCGCTGGGCCCG
GCGCTCGCGCGACGCTCACGAGGGCAACCCCAACGCACTTTTCGGCATCG
TGCAGGGCGGCATGTTCGAGGCGCTTCGCGACGAATCCCTCGCGGGACTG
GAGGACATCGGCTTCGACGGCTACGCGATCGGCGGGCTGTCGGTCGGCGA
ACCCAAGGAGGACATGCAGCGCATCCTCGCCCACACGGCACCGCGCCTGC
CGGCCGGAAAACCCCGCTACCTGATGGGGGTCGGCACGCCCGAAGACCTC
ATTGCGGGGGTGAGCGCCGGCATCGACATGTTCGACTGCGTGCTGCCGAC
GCGCAACGCGCGCAATGGCTGGCTGTTCACGCGGTTCGGCGACGTGAAGA
TCCGCAATGCCCGGTACCGCGAGGACACCGGCCCGCTTGACGCGACCTGC
GGCTGCTATTGCTGCACCAATTTCACCCGGGCCTATCTCCACCACCTGCA
ACGGGCCAACGAAATCCTCGGGGCGCGGCTGGCCACGATGCACAACCTGT
ACTACTACCTGCAACTGATGCGGGAACTCCGCGCGGCCATCGAGGCCCAA
GCCCTGCCCGCCGCCGCAGCGCGCCTGCTGGAGGATCGCCGCAGGCACGC
TGCCGCAGACGGGTGA
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