mRNA_P-wetherbeei_contig1450.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1450.2.1
Unique NamemRNA_P-wetherbeei_contig1450.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 2.090e-62
Identity = 129/324 (39.81%), Postives = 171/324 (52.78%), Query Frame = 1
Query:    1 PLLLVIGVQ---KGGTTNLRFNLLQHPQLSGAR-REVHFFDERFSFVAELGMN--------GTTPLPANVAAQLLINDGSGGSDXXXXXXXXXGGKSDHGCFAIDVSPRYVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYIC-----RGYGVVPHAAPAIFPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFEPLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPPFPYRYDPSHQSPDIMCRPGRKAAAAARQAEMTAAGDEALLREYYAPHNERLFRLIGRDLGW 921
            PL ++IG Q   KGGT NLR +LL HP LSG R +E HFFD  F F ++            G   L ++ A ++L       S            +       ++ +P Y F+P  PYR++ +LP  R+V++LRDP  RYFS L M +C       +  +       F + G V  YLE    +Y PY  LCRG  A A DL  C       +PL RGLYADQLERWF ++PRSQI+VL+S+E+F NFTG LD+V    GLPP  Y YD  HQ     C        A          D+ +L+E+Y PHNERL+RL+GR++ W
Sbjct:  216 PLAIIIGTQASAKGGTQNLRSHLLTHPSLSGLRQKEAHFFDW-FWFTSDPKSRHEWRGDGRGGAGLNSSAAGEVL-------SAYADRAMEAVDPRKRDTMATVESTPLYFFYPLAPYRMKMVLPAARLVLILRDPTERYFSHLRMMMCWTRDSETFDHLEKRQKTYFHIPGRVKEYLERGEASYKPYTPLCRGEEARAKDLLRCWKAMVTHDPLHRGLYADQLERWFRVYPRSQILVLESSEMFGNFTGTLDKVARHIGLPPHGYEYDSRHQHASAPCERNHPELFAEGGRYQKMLEDQRVLQEWYRPHNERLYRLLGREMPW 531          
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: D7G9G8_ECTSI (Putative deacetylase sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G8_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.560e-51
Identity = 112/294 (38.10%), Postives = 146/294 (49.66%), Query Frame = 1
Query:    1 PLLLVIGVQKGGTTNLRFNLLQHPQLSGARREVHFFDERFSFVAELG-----------MNGTTPLPANVAAQLLINDGSGGSDXXXXXXXXXGGKSDHGCFAIDVSPRYVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYICR-----GYGVVPHAAPAIFPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFEPLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPPFPYRYDPS------------HQSPDIMCRPGR 798
            PL+ +IGVQKGGTTNLR NLL HP ++G   EVHFFD+      +LG             G      +  A+  + +G                        ++ SPRY+  P  PYR+R +LP  ++VV+LRDP  RYFS+L M +C+     GY  +       F   G    Y++ A  AY PY E CRG  A +ADLW C        PL RGLYADQLERWF ++ +SQI+V+DS E+F NFT  +  V  +AGLP   + YD              H  PD     GR
Sbjct:  133 PLITIIGVQKGGTTNLRRNLLTHPLVTGMPNEVHFFDQDPDIYPKLGHWQGDGREKELSPGAIGRILSEYAKTCLEEGKPKKKPAWHKNVAAMSSG----VIVESSPRYILSPIAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAVVAEWAGLPEHEFEYDKHEFKGACRDKIRYHNQPDFFADGGR 422          
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: D7FST9_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST9_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 1.240e-50
Identity = 113/280 (40.36%), Postives = 143/280 (51.07%), Query Frame = 1
Query:    1 PLLLVIGVQKGGTTNLRFNLLQHPQLSGAR-REVHFFDERFSFVAELGMNGTTPLPANVAAQLLINDGSGGSDXXXXXXXXX-GGKSDHGCFAIDVS-----------PRYVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYIC-----RGYGVVPHAAPAIFPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFEPLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPPFPYRYDPSHQSPDIMC 786
            PL ++IG QKGGT NLR +LL HP LSG R +E HFFD  F F          P   N        DG GG+              +D    A+D S           P Y+F P  PYR+R +LP  R+V++LRDP  RYFS L M +C       +  +       F + G V  YLE    +Y PY  LCRG  A A DL  C       +PL RGLY DQLERW  ++PRSQI+V++S+E+F +FTG L++V    GLPP  + YD  HQ     C
Sbjct:  274 PLAIIIGTQKGGTQNLRSHLLTHPSLSGLRQKEAHFFDW-FWF----------PSDPNKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVDPSKRDTMATVESSPLYLFFPLAPYRMRMVLPAARLVLILRDPTERYFSHLRMMMCGTRDGETFDQLEERLETYFHIPGRVKEYLEQGEASYKPYTPLCRGEGARAKDLLRCWKAMVTHDPLHRGLYVDQLERWLRVYPRSQILVVESSEMFGDFTGTLNQVARHIGLPPHDFSYDSRHQHASAPC 542          
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: A0A6H5KMM8_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM8_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 4.220e-42
Identity = 87/219 (39.73%), Postives = 114/219 (52.05%), Query Frame = 1
Query:  292 YVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYICRGYGVVPHAAPAI--------FPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFEPLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPPFPYRYDPSHQSPDIMCRPGRKAAAAARQAEMTAAGDEALLREYYAPHNERLFRLIGRDLGWN 924
            YVF+P  PYR++ + PH R+VV+L+DP ARYFS   M +C   G +  + P          F   G    YL         Y  LCRG  A   DL  C +      PL RGLYADQLERWF++F RSQI+V+DS+EL+ +F   L+R     GLPP  + Y+   Q     C+  R                E L R++Y PHNERL+ LIG+D  W+
Sbjct:    2 YVFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMC---GKIDESKPKTSVNYRLRAFHAPGRAAGYLNRGTDKVERYAPLCRGVNAEPGDLAKCFMAINGQNPLLRGLYADQLERWFAVFSRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYNSDFQHSTGACKENRPQFFGEDGRYKKMLEQEQLFRDWYRPHNERLYSLIGKDFKWD 217          
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: D7G3W4_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W4_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 2.200e-41
Identity = 91/237 (38.40%), Postives = 121/237 (51.05%), Query Frame = 1
Query:  259 HGCFAIDVSPRYVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYICRG-----YGVVPHAAPAIFPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFEPLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPPFPYRYDPSHQSPDIMCRPGRKAAAAARQAEMTAAGDEA----------LLREYYAPHNERLFRLIGRDLGWN 924
            HG   ++ SPRY+F+P  PYR+  + P  R+V++LRDP  RYFS+L M +C G     +  V       F   G    Y++     Y PY  LCRG  A   DL  C        PL RGLYADQLERWF +F +SQI+++DS  +  +  GVL  V A  GLP   +  D   Q    +C       A  R  +    G+E           L RE+Y PHNERLF+L+GR + W+
Sbjct:    9 HGKVTVESSPRYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKTNQTFERVQENQATWFHSPGDAAGYIDGGEATYEPYTPLCRGENATTEDLRDCYRAQLPHHPLLRGLYADQLERWFRVFDKSQILIVDSANMMEDLPGVLADVAAHIGLPGSDFDSDRPVQHSTGLCP------ALGRGEDPDFFGEEGRYDKMLEEEDLFREWYRPHNERLFKLLGRSMMWD 239          
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: D7G3W5_ECTSI (Similar to heparan sulfate sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W5_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 1.400e-35
Identity = 103/317 (32.49%), Postives = 143/317 (45.11%), Query Frame = 1
Query:    1 PLLLVIGVQKGGTTNLRFNLLQHPQLSGAR-REVHFFDERFSFVAELG-MNGTT------PLPANVAAQLL-INDGSGGSDXXXXXXXXXGGKSDHGCFAIDVSPRYVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYICRGYGVVPHAAPAIFPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFEPLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPPFPYRYDPSHQSPDIMCRPGRKAAAAARQAEMTAAGDEALLREYYAPHNERLFRLIGRDLGWN 924
            PL  +IGVQKGGT NLR +LLQHP LSG    E HFFD        LG   G T       LPA+ A ++L +   +              G +      +D SP Y+F+P  PYR++ + PH R+VV+L+DP AR   ++++++ RG+                                                           R    +QLERWF++FPRSQI+V+DS+EL+ +F   L+R     GLPP  + YD   Q     C+  R                E L R++Y PHNERL+ LIG+DL W+
Sbjct:  121 PLGTIIGVQKGGTQNLRSHLLQHPLLSGVPGTEAHFFDRNPDTYPSLGEWPGNTGDARRAKLPASAAGEVLELYSNATMRTIGAPDELEEAGVT----VTVDSSPMYIFYPLAPYRMKMVQPHARLVVILKDPTAR---KIAVFL-RGFS---------------------------------------------------------DRKRQPNQLERWFAVFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHGTGACKDNRPQFFGEDGRYKKMLEQEQLFRDWYRPHNERLYSLIGKDLKWD 372          
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: A0A835YYW0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW0_9STRA)

HSP 1 Score: 133 bits (335), Expect = 8.900e-34
Identity = 98/256 (38.28%), Postives = 116/256 (45.31%), Query Frame = 1
Query:    1 PLLLVIGVQKGGTTNLRFNLLQHPQLSGARREVHFFDERFSFVAELGM--NGTTPLP--ANVAAQL------LINDGSGGSDXXXXXXXXXGGKSDHGCFAIDVSPRYVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYICRGYGVVPHAAPAIFPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFEPLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPP 738
            PL ++IG QK GTTNLR NLL HP L+G+R E HFFD  F    E G   + TT +      AA L      L+   +G             G++    F  D SP Y   PA   R  AL P  R+V+L+RDPV RYFS   M  C     V     A     G   R  E A    A   + C G          C+  A     LARGLYAD L RW   FP   ++V+DS   F     VLD V AF GLPP
Sbjct:    9 PLFIIIGAQKAGTTNLRHNLLSHPSLAGSRTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRA----FVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTCWN-ATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGR---CQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPP 256          
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: D8LJ80_ECTSI (N-deacetylase/N-sulfotransferase (Heparan glucosaminyl) 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ80_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 6.040e-31
Identity = 105/323 (32.51%), Postives = 146/323 (45.20%), Query Frame = 1
Query:    1 PLLLVIGVQKGGTTNLRFNLLQHPQLSGARREVH------FF---DERFSFVAEL-GMNGTTPLPANVAAQLLINDGSGGSDXXXXXXXXXGGKSDHGCFAIDVSPRYVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYICRGYGVVPHAAPAIFPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFE-PLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPP----FPYRYDPSHQSPDIMCRPGRKAAAAARQAEMTAAGDEALLREYYAPHNERLFRLIGRDLGWN 924
            P ++++G ++ GT+ L   L QHP +     E        F     E F   AE  G N    LPA+V  +LL       +           G          VSP Y      PYR++  +P V+IVV+LRDP  RY+SEL   +C    V      + + +      YL  A   Y+PYD+ C G  A+AADLWAC+    +   PL +GLYA QLERW   F  SQ++V+ + +LF         V  FAGL      F +  D      +  C P RK       A       E  LR++YA HN+ +  L+G ++GWN
Sbjct:  161 PSVIIVGARRSGTSTLFSMLSQHPAVGSMAPEPRPELSCGFMAQDPETFPQEAEWPGDNLEKELPASVLGKLLEEF----ARPYTVSESRHEGVDAPNLVTTAVSPGYFASHLAPYRLKLAMPDVKIVVVLRDPTNRYYSELREALCADE-VDWEDIMSSYAMPAASKDYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAPQLERWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHTFFEFAVDR-----EASCDPRRKKNPEVVTAYSKRKESEPQLRKWYAEHNDMVSELLGEEMGWN 473          
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: A0A6H5K695_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K695_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.280e-29
Identity = 82/224 (36.61%), Postives = 116/224 (51.79%), Query Frame = 1
Query:  280 VSPRYVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYICRGYGVVPHAAPAIFPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFE-PLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPP----FPYRYDPSHQSPDIMCRPGRK----AAAAARQAEMTAAGDEALLREYYAPHNERLFRLIGRDLGWN 924
            VSP Y      PYR++  +P V++VV+LRDP  RY+SEL   +C    V      + F + G    YL  A   Y+PYD+ C G  A+AADLWAC+    +   PL +GLYA QL+RW   F  SQ++V+ + +LF         V  FAGL      F +  D      +  C P RK      A +++ E      E  LR++YA HN+ +  L+G ++GWN
Sbjct:   67 VSPGYFSSHLAPYRLKLAIPDVKVVVVLRDPTDRYYSELREALCADE-VDWEDIMSSFAMPGACKGYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAAQLDRWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHSFFEFAVDR-----EASCDPRRKNPEVVTAYSKRKE-----SEPQLRKWYAEHNDIVSELLGEEMGWN 279          
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Match: UPI001F093AF5 (sulfotransferase domain-containing protein n=1 Tax=Paenibacillus periandrae TaxID=1761741 RepID=UPI001F093AF5)

HSP 1 Score: 125 bits (313), Expect = 1.750e-28
Identity = 102/311 (32.80%), Postives = 140/311 (45.02%), Query Frame = 1
Query:    1 PLLLVIGVQKGGTTNLRFNLLQHPQL-SGARREVHFFDERFSFVAELGMNGTTPLPANVAAQLLINDGSGGSDXXXXXXXXXGGKSDHGCFAIDVSPRYVFHPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYICRGYGVVPHAAPAIFPLAGMVPRYLEAAR-KAYAPYDELCRGPAAAAADLWACKVNATEFEPLARGLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPPFPYRYDPSHQSPDIMCRPGRKAAAAARQAEMTAAGDEAL-LREYYAPHNERLFRLIGRDLGWN 924
            P  L+IG QKGGTT+L  +L+QHP + S A +EVHFFDE++    +LG +       N    L+    +G S                       SP Y+FHP  P RVR  LP V+++V+LR+PV R +S   M + RG        P  FP A      L+A R +    Y+ + R P  ++        N + F  L RGLY +QLERW+  FP+ QI+V+ S   F        +V  F  +P               +  PG        + E   + D    LR YYA  N RLF LIG    W+
Sbjct:  351 PAFLIIGTQKGGTTSLYHDLVQHPNIQSAAVKEVHFFDEQY----QLGFDW---YKKNFPPDLIEGHITGES-----------------------SPYYLFHPQTPGRVREWLPEVKLIVVLRNPVDRAYSHYQMMVRRGL------EPMSFPEA------LQAERSRVEEAYNRMIRDPRFSS-------QNCSIFSYLKRGLYVEQLERWYRYFPKDQILVMSSEAWFQEPAVSYRKVLDFLDMP---------------LWEPGEYVLLNEGEYEQPISQDTMKWLRNYYAEPNRRLFELIGETYDWD 597          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1450.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDR2_9PHAE2.090e-6239.81Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
D7G9G8_ECTSI1.560e-5138.10Putative deacetylase sulfotransferase n=1 Tax=Ecto... [more]
D7FST9_ECTSI1.240e-5040.36Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5KMM8_9PHAE4.220e-4239.73Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
D7G3W4_ECTSI2.200e-4138.40Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
D7G3W5_ECTSI1.400e-3532.49Similar to heparan sulfate sulfotransferase n=1 Ta... [more]
A0A835YYW0_9STRA8.900e-3438.28P-loop containing nucleoside triphosphate hydrolas... [more]
D8LJ80_ECTSI6.040e-3132.51N-deacetylase/N-sulfotransferase (Heparan glucosam... [more]
A0A6H5K695_9PHAE1.280e-2936.61Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
UPI001F093AF51.750e-2832.80sulfotransferase domain-containing protein n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1450contigP-wetherbeei_contig1450:5415..7107 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FST9
Model size924
Max annot lvl2880.D7FST9|-
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.03e-51
EggNOG OGsKOG3704@1|root,KOG3704@2759|Eukaryota
Descriptionheparan sulfate sulfotransferase activity
Cds size924
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186024.0133924-CDS-P-wetherbeei_contig1450:5414..56081683186024.0133924-CDS-P-wetherbeei_contig1450:5414..5608Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1450 5415..5608 +
1683186024.023199-CDS-P-wetherbeei_contig1450:5698..59271683186024.023199-CDS-P-wetherbeei_contig1450:5698..5927Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1450 5699..5927 +
1683186024.0327394-CDS-P-wetherbeei_contig1450:6315..65461683186024.0327394-CDS-P-wetherbeei_contig1450:6315..6546Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1450 6316..6546 +
1683186024.0435512-CDS-P-wetherbeei_contig1450:6837..71071683186024.0435512-CDS-P-wetherbeei_contig1450:6837..7107Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1450 6838..7107 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1450.2.1prot_P-wetherbeei_contig1450.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1450 5415..7107 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1450.2.1

>prot_P-wetherbeei_contig1450.2.1 ID=prot_P-wetherbeei_contig1450.2.1|Name=mRNA_P-wetherbeei_contig1450.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=308bp
PLLLVIGVQKGGTTNLRFNLLQHPQLSGARREVHFFDERFSFVAELGMNG
TTPLPANVAAQLLINDGSGGSDGGSDDGSDRGGKSDHGCFAIDVSPRYVF
HPAVPYRVRALLPHVRIVVLLRDPVARYFSELSMYICRGYGVVPHAAPAI
FPLAGMVPRYLEAARKAYAPYDELCRGPAAAAADLWACKVNATEFEPLAR
GLYADQLERWFSLFPRSQIVVLDSNELFANFTGVLDRVTAFAGLPPFPYR
YDPSHQSPDIMCRPGRKAAAAARQAEMTAAGDEALLREYYAPHNERLFRL
IGRDLGWN
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mRNA from alignment at P-wetherbeei_contig1450:5415..7107+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1450.2.1 ID=mRNA_P-wetherbeei_contig1450.2.1|Name=mRNA_P-wetherbeei_contig1450.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1693bp|location=Sequence derived from alignment at P-wetherbeei_contig1450:5415..7107+ (Phaeothamnion wetherbeei SAG_119_79)
CCGCTCCTCCTCGTCATCGGCGTGCAGAAGGGGGGAACGACGAACTTGCG CTTCAACCTGCTGCAACACCCGCAACTTTCGGGCGCAAGACGCGAGGTGC ATTTCTTTGACGAGCGATTTTCGTTTGTTGCTGAACTCGGCATGAACGGT ACGACACCGCTCCCGGCAAACGTCGCCGCCCAGCTGCTGATAAAGTACTC GAAGACCCTCGCCAAGAAAAATAAGAGAAGGGGAGGCAGGGGAGCAATTG GCTGTGGCGGCGGCGGTGGCATCAATCGGGCCAGCGACGGCAGTGGAGGA AGCGACGGCGGCAGTGACGACGGCAGCGACCGCGGCGGCAAAAGCGACCA CGGATGCTTCGCCATCGACGTGTCCCCGCGCTACGTCTTCCACCCGGCGG TGCCGTACCGCGTCCGTGCGCTGCTGCCGCACGTGCGCATAGTGGTACTG CTGCGGGACCCCGTCGCCCGTTACTTCAGCGAACTCTCGATGTACATTTG CCGTGGCTACGGCGTTCGCCACTACCATCTCGCCGGTGAGCGAGCTAGCC GGCGAAGAGGGCATCTTTGTTCGTTCTTTCCTTCTTTGCTCCTGTGGCGA GACGGGGAAGCATGGCGGAGGCGGTGGTGGCGGCGGCGGCGGGGGCGGCG GCGAAGGATGAGGCGGCGGCAGTGAAGGTGGCTTTGTCTAGTCGGTGGTG GCGGCGGCAACAGTGGGAGGAAGCCGTGATGTTTTGGGAGCACGCCTTTT CTTACGGTTGACTTTCCACGGCGGGCGTCCCTTCATTGGCAAGGTTGAAA GGTTTCCTTCCAAAAGAAAAGCTGAACGGGGCTTTTAGGGCTGCCACCCC AACCGTTGTTTCCCGCCGCACAGCGGAAAAACCGGCAACGCACTCCCACA GGTCGTCCCTCACGCCGCCCCCGCCATCTTCCCCTTGGCAGGCATGGTTC CCAGGTACCTCGAAGCGGCTCGGAAGGCCTACGCGCCATACGACGAGTTG TGCCGCGGGCCCGCCGCCGCCGCCGCGGACCTCTGGGCGTGCAAGGTCAA CGCTACCGAGTTCGAGCCGCTCGCACGCGGCCTCTATGCGGACCAGCTCG AGCGCTGGTTCTCCCTCTTCCCGCGCTCCCAGGTGCGTACGAAAACATAA CAGGAAAAAATAAAGGACGTTTCGTTCCTTCTTGGGGCCACTTCGTTGGC AATGTTGTTGTTGTAGCTGGGTGTCTTTTGAAGGCGGGCTTCTCTGCTTG CTTCAGTTTATGGAAGCGAAATCGTATCGCCTAGAGCTAGAGTCATTGGA GTGTGAGAGGCGCCCGAGATATACAATTTCTTGCAATTATTAGGATCACA TCTCTCACGCACGGCAAGCTCAACGTTTCGTCGCATCTACTCTTTTCCCC TTTGTGTCCCGCCGCTGCCGCAGATCGTGGTGCTGGACTCCAACGAACTC TTCGCCAACTTCACGGGCGTCCTCGACCGCGTCACCGCCTTCGCCGGCCT TCCCCCCTTCCCCTACCGCTACGATCCCTCCCACCAGAGCCCTGATATCA TGTGCCGCCCGGGGCGCAAGGCGGCGGCGGCAGCGCGGCAGGCGGAGATG ACCGCCGCCGGTGACGAGGCGCTGCTGCGGGAGTACTACGCGCCGCACAA CGAGCGGCTCTTTCGGCTCATCGGAAGGGACCTCGGCTGGAAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1450:5415..7107+

>mRNA_P-wetherbeei_contig1450.2.1 ID=mRNA_P-wetherbeei_contig1450.2.1|Name=mRNA_P-wetherbeei_contig1450.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=924bp|location=Sequence derived from alignment at P-wetherbeei_contig1450:5415..7107+ (Phaeothamnion wetherbeei SAG_119_79)
CCGCTCCTCCTCGTCATCGGCGTGCAGAAGGGGGGAACGACGAACTTGCG
CTTCAACCTGCTGCAACACCCGCAACTTTCGGGCGCAAGACGCGAGGTGC
ATTTCTTTGACGAGCGATTTTCGTTTGTTGCTGAACTCGGCATGAACGGT
ACGACACCGCTCCCGGCAAACGTCGCCGCCCAGCTGCTGATAAACGACGG
CAGTGGAGGAAGCGACGGCGGCAGTGACGACGGCAGCGACCGCGGCGGCA
AAAGCGACCACGGATGCTTCGCCATCGACGTGTCCCCGCGCTACGTCTTC
CACCCGGCGGTGCCGTACCGCGTCCGTGCGCTGCTGCCGCACGTGCGCAT
AGTGGTACTGCTGCGGGACCCCGTCGCCCGTTACTTCAGCGAACTCTCGA
TGTACATTTGCCGTGGCTACGGCGTCGTCCCTCACGCCGCCCCCGCCATC
TTCCCCTTGGCAGGCATGGTTCCCAGGTACCTCGAAGCGGCTCGGAAGGC
CTACGCGCCATACGACGAGTTGTGCCGCGGGCCCGCCGCCGCCGCCGCGG
ACCTCTGGGCGTGCAAGGTCAACGCTACCGAGTTCGAGCCGCTCGCACGC
GGCCTCTATGCGGACCAGCTCGAGCGCTGGTTCTCCCTCTTCCCGCGCTC
CCAGATCGTGGTGCTGGACTCCAACGAACTCTTCGCCAACTTCACGGGCG
TCCTCGACCGCGTCACCGCCTTCGCCGGCCTTCCCCCCTTCCCCTACCGC
TACGATCCCTCCCACCAGAGCCCTGATATCATGTGCCGCCCGGGGCGCAA
GGCGGCGGCGGCAGCGCGGCAGGCGGAGATGACCGCCGCCGGTGACGAGG
CGCTGCTGCGGGAGTACTACGCGCCGCACAACGAGCGGCTCTTTCGGCTC
ATCGGAAGGGACCTCGGCTGGAAC
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