prot_P-wetherbeei_contig145.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig145.2.1
Unique Nameprot_P-wetherbeei_contig145.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length251
Homology
BLAST of mRNA_P-wetherbeei_contig145.2.1 vs. uniprot
Match: A0A835YHQ9_9STRA (Npa1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ9_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.780e-18
Identity = 93/265 (35.09%), Postives = 121/265 (45.66%), Query Frame = 0
Query:    1 RVLCRALPWLDAANDPNQRAVVLAALSACPDVVPAYLASFGTDALAPRANSADCLATYRLLARVLAAAPL--GDVPARAGRAAARMTPMDAFLRVALPPALNKAVLTKGVLIGDGVLQAAVFRVAALALQRCGRLVRALEGSVVPSAGSAAAGVSRLAAAVATGSDLRHALRNRLPEVQTLVSLRARLDPSVTAVAISAAATAAAGGNVEGGSEKNGQGVS------------LYALLLRLLRLYQRWVPEAVAAASYDMLKLLP 251
            R + RA   L A +D   RA+++A L A P ++  +L S    +L PRA    CL  Y LLA VL  APL  GD+   +G AAA      A   + LPPAL K   TKG+L    ++QA+   +   AL R G L+R                  RL+AA    + L   LR +LPEVQT+++LRARLDP     A                                     +Y   L  LRLY R +P AV AA +D+LKLLP
Sbjct:  413 RAVARAALLLPAQSDAAARALLVAVLRATPPLLAPFLESLSAASLEPRATPR-CLRGYALLAEVLRCAPLPRGDL---SGAAAA------ALAALVLPPALGKKEFTKGILSPSPLVQASTLTLLCAALARAGALLR------------------RLSAAADARAALSAQLRAQLPEVQTILALRARLDPFTAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYIYGRALAALRLYARHLPAAVDAARFDLLKLLP 649          
BLAST of mRNA_P-wetherbeei_contig145.2.1 vs. uniprot
Match: D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 3.940e-13
Identity = 82/254 (32.28%), Postives = 110/254 (43.31%), Query Frame = 0
Query:    1 RVLCRALPWLDAANDPNQRAVVLAALSACPDVVPAYLASFGTDALAPRANSADCLATYRLLARVLAAAPLGDVPARAGRAAARMTPM---DAFLRVALPPALNKAVLTKGVLIGDGVLQAAVFRVAALALQRCGRLVRALEGSVVPSAGSAAAGVSRLAAAVATGSDLRHALRNRLPEVQTLVSLRARLDPSVTAVAISAAATAAAGGNVEGGSEKNGQGVSLYALLLRLLRLYQRWVPEAVAAASYDMLKLLP 251
            R L   L  L A  D  QR ++L  L ACP ++  YL +F T  L  R      L TY LL+ VL   P+                     A     +P  LNK  LT+GVL G  +LQAA   + A  L R   +  A  GS     G                 D++  LR R+P++QTL+ LR ++      V    A+ A  G +V+       + V L   +L LL  Y R +P +VAAA +D LKLLP
Sbjct:  505 RPLLAGLACLGAHEDLGQRTLLLPTLVACPSLLGPYLRTFNTAMLEARPTYR-LLQTYSLLSTVLRKVPVAGSXXXXXXXXXXXXXXXAGQALFSTVMPAELNKKELTRGVLSGSPLLQAATMNLMAGILDRSSLVAAAAAGSSPSPPGVV---------------DMKRLLRQRMPDLQTLLGLRDKIG-----VGAGDASKAPGGQHVD-------RAVVLRWRVLSLLDRYARVIPSSVAAARFDFLKLLP 730          
BLAST of mRNA_P-wetherbeei_contig145.2.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 6.070e-12
Identity = 85/269 (31.60%), Postives = 113/269 (42.01%), Query Frame = 0
Query:    1 RVLCRALPWLDAANDPNQRAVVL---------------AALSACPDVVPAYLASFGTDALAPRANSADCLATYRLLARVLAAAPL-GDVPARAGRAAARMTPM--DAFLRVALPPALNKAVLTKGVLIGDGVLQAAVFRVAALALQRCGRLVRALEGSVVPSAGSAAAGVSRLAAAVATGSDLRHALRNRLPEVQTLVSLRARLDPSVTAVAISAAATAAAGGNVEGGSEKNGQGVSLYALLLRLLRLYQRWVPEAVAAASYDMLKLLP 251
            R L   L  L A  D  QRA++L               + L ACP ++  YL +F T  L  R      L TY LL+ VL   P+ G  P                A     +P  LNK  LT+GVL G  +LQAA   + A  L R   +V A  GS     G                 +++  LR R+P++QTL+ LR ++              A  G  V GG   + + V L   +L LL  Y R +P +VAAA +D LKLLP
Sbjct:  473 RPLLAGLACLGAHEDLGQRALLLVGRCLLLEASSKWYRSTLVACPSLLGPYLRTFNTAILEARPTYR-LLQTYSLLSAVLRKVPVAGSSPLSEEXXXXXXXXXAGQALFSTVMPAELNKKELTRGVLSGSTLLQAATMNLMASILDRASLVVAAAAGSSPSPPGVV---------------EMKRLLRQRMPDLQTLLGLRDKIGVG-----------AGDGSKVTGGQHVD-RAVVLRWRVLSLLDRYARLIPSSVAAARFDFLKLLP 713          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig145.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YHQ9_9STRA2.780e-1835.09Npa1 domain-containing protein n=1 Tax=Tribonema m... [more]
D7G8A9_ECTSI3.940e-1332.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K182_9PHAE6.070e-1231.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039844Nucleolar pre-ribosomal-associated protein 1PANTHERPTHR13500NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1coord: 2..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig145contigP-wetherbeei_contig145:11351..12190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig145.2.1mRNA_P-wetherbeei_contig145.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig145 11351..12190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig145.2.1 ID=prot_P-wetherbeei_contig145.2.1|Name=mRNA_P-wetherbeei_contig145.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
RVLCRALPWLDAANDPNQRAVVLAALSACPDVVPAYLASFGTDALAPRAN
SADCLATYRLLARVLAAAPLGDVPARAGRAAARMTPMDAFLRVALPPALN
KAVLTKGVLIGDGVLQAAVFRVAALALQRCGRLVRALEGSVVPSAGSAAA
GVSRLAAAVATGSDLRHALRNRLPEVQTLVSLRARLDPSVTAVAISAAAT
AAAGGNVEGGSEKNGQGVSLYALLLRLLRLYQRWVPEAVAAASYDMLKLL
P
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039844URB1