mRNA_P-wetherbeei_contig14381.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14381.2.1
Unique NamemRNA_P-wetherbeei_contig14381.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A7C3NT59_9PROT (Xanthine dehydrogenase family protein subunit M n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NT59_9PROT)

HSP 1 Score: 348 bits (894), Expect = 6.900e-119
Identity = 186/242 (76.86%), Postives = 206/242 (85.12%), Query Frame = 1
Query:    1 PDAKLLAGGMTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRALQKLL 726
            P+AKLLAGGMTLIPTLKQRLA+P+HLVDI GLPEL+GI+V   +L IGAA++HHEVATSAVVKKAIPALA LA  IGDPQVRN GTIGGSVANNDPAADYPAAVLAL ATVVT+KREIAA DYFQG+FATALEEGEIIV I F +PKRAAY KFPHPASGYAMAGVF+A  A+G+R+AVTGA  GVFRW+AAE  LAK +   AL    L    +NEDIHATREYRANL RVM KRAL K++
Sbjct:   23 PEAKLLAGGMTLIPTLKQRLARPSHLVDIAGLPELKGIKVAKGRLEIGAATKHHEVATSAVVKKAIPALAYLAGLIGDPQVRNMGTIGGSVANNDPAADYPAAVLALGATVVTSKREIAADDYFQGLFATALEEGEIIVRIAFPVPKRAAYAKFPHPASGYAMAGVFIARTAEGVRIAVTGAGPGVFRWKAAEAALAKGLKPAALEAAALDAGGLNEDIHATREYRANLVRVMAKRALAKIV 264          
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A0S8C2G2_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C2G2_9PROT)

HSP 1 Score: 341 bits (875), Expect = 5.000e-116
Identity = 181/241 (75.10%), Postives = 198/241 (82.16%), Query Frame = 1
Query:    1 PDAKLLAGGMTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRALQKL 723
            P+AKL+AGGMTL+PTLKQRLAQP+HLVDIG LPELRGI  K   L IGAA++HH+VATSAV KKAIP+LA LA  IGDPQVRN GTIGGSVANNDPAADYPAAVL L ATVVTNKREIAA DYFQGMF TALEEGEII  I F +P+RAAY KF HPASGYAMAGVFVA+ + G RVAVTGA  GVFRW+AAE  L K     A+ GV L   +MNEDIHATREYRANL RVM KRA+ +L
Sbjct:   23 PEAKLMAGGMTLVPTLKQRLAQPSHLVDIGALPELRGITAKAGTLTIGAATKHHDVATSAVAKKAIPSLAYLAGLIGDPQVRNLGTIGGSVANNDPAADYPAAVLGLGATVVTNKREIAADDYFQGMFTTALEEGEIITRIVFPVPRRAAYAKFAHPASGYAMAGVFVAQTSDGTRVAVTGAGPGVFRWKAAETALGKNPKAAAIEGVALDAGEMNEDIHATREYRANLVRVMAKRAIAQL 263          
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A7C2UED0_9PROT (Xanthine dehydrogenase family protein subunit M n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UED0_9PROT)

HSP 1 Score: 338 bits (866), Expect = 1.250e-114
Identity = 179/241 (74.27%), Postives = 198/241 (82.16%), Query Frame = 1
Query:    1 PDAKLLAGGMTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRALQKL 723
            PDAKLLAGGMTLIPTLKQRLA+PTHL+D+GGL EL GIE K  +LVIGA  +HHEVATSA V+KAIPALA LA  IGDPQVRN GTIGGSVANNDPAADYPAAVL L ATVVT +REIAA D+FQGMFATALE  EIIV     +PKRAAY KFPHPASGYAMAGVF+AE  +G+RVAVTGA  GVFRW AAE+ LAKK    AL G+ +  + +NED HATREYRANL  VM +RALQK+
Sbjct:   23 PDAKLLAGGMTLIPTLKQRLARPTHLIDLGGLKELSGIEAKDGKLVIGAGVRHHEVATSAAVRKAIPALAELAGVIGDPQVRNCGTIGGSVANNDPAADYPAAVLGLGATVVTTRREIAADDFFQGMFATALEASEIIVRFVCPVPKRAAYAKFPHPASGYAMAGVFIAETGQGVRVAVTGAGPGVFRWTAAEEALAKKFDASALEGLAVDPEALNEDFHATREYRANLVAVMARRALQKI 263          
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A1F4DHX7_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DHX7_9PROT)

HSP 1 Score: 335 bits (860), Expect = 1.020e-113
Identity = 176/240 (73.33%), Postives = 202/240 (84.17%), Query Frame = 1
Query:    4 DAKLLAGGMTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRALQKL 723
            DAKLLAGGMTLIPTLK RLAQP+HLVDIGGL ELRGIE+K  +L IGAA+QHHEVA S+VV++A+PALA LA  IGDPQVRN GTIGGSVANNDPAADYPAA+L L ATV+T +REI AGD+FQGMFATAL  GEI+V I F +PKRAAY KFPHPASGYAMAGVFVAE A G+RVAVTGA  GVFRW+ AE  L K M+  AL G+ +  +D+NED+HATREYRANL +VM +RA+ +L
Sbjct:   24 DAKLLAGGMTLIPTLKARLAQPSHLVDIGGLKELRGIELKDGELRIGAATQHHEVAVSSVVRQALPALAYLAGLIGDPQVRNLGTIGGSVANNDPAADYPAALLGLAATVLTTRREIPAGDFFQGMFATALAPGEIVVRIAFPVPKRAAYAKFPHPASGYAMAGVFVAETANGVRVAVTGAGPGVFRWQEAEAALKKNMSPAALDGLTVNAEDLNEDMHATREYRANLVKVMARRAVAQL 263          
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A1F4D4X5_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4D4X5_9PROT)

HSP 1 Score: 335 bits (858), Expect = 2.060e-113
Identity = 177/241 (73.44%), Postives = 200/241 (82.99%), Query Frame = 1
Query:    1 PDAKLLAGGMTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRALQKL 723
            PDAKLLAGGMTLIPTLK RLAQP+HLVDIGGLPEL GIE+   +L IGAA++H EVA S  VKKAIPALA LAD IGDPQVRN GTIGGSVANNDPAADYPAAVL L A+V+T +REIAA DYFQGMFATAL+  E+IV I F +PKRAAY KFPHPASGYAMAGVF+AE A+G+RVAVTGA  GVFRW+ AE  LA  M+  AL G+ ++ +D+NEDIHATREYRANL  VM +RA  K+
Sbjct:   23 PDAKLLAGGMTLIPTLKARLAQPSHLVDIGGLPELAGIELMDGKLAIGAATRHFEVAGSDTVKKAIPALAYLADLIGDPQVRNLGTIGGSVANNDPAADYPAAVLGLGASVITTQREIAADDYFQGMFATALDPREVIVRIVFPLPKRAAYAKFPHPASGYAMAGVFIAETAQGVRVAVTGAGPGVFRWQEAEAALATNMSAAALDGLAVSAEDLNEDIHATREYRANLVAVMARRAAAKI 263          
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A1F4BMI6_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BMI6_9PROT)

HSP 1 Score: 332 bits (850), Expect = 3.520e-112
Identity = 177/241 (73.44%), Postives = 199/241 (82.57%), Query Frame = 1
Query:    1 PDAKLLAGGMTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRALQKL 723
            P+AKLL+GGMTL+PTLK RLA+PTHLVDIG L ELR I VKG +L++GA ++HHEVATSAVVKKAIPALA LA +IGDPQVRNRGTIGGSVANNDPAADYPAAVL L ATVVT KREIAA  +FQG+F TALE+GEIIV I+F +PKRAAY KF HPASGYAMAGVF+A+ A G+RVAVTGA  G FRW AAE  LA  +   AL GV L + + N D+HA REYRANL RVM KRAL KL
Sbjct:   23 PEAKLLSGGMTLLPTLKARLARPTHLVDIGHLAELRKIAVKGGRLLVGAGARHHEVATSAVVKKAIPALAGLAGEIGDPQVRNRGTIGGSVANNDPAADYPAAVLGLAATVVTTKREIAADRFFQGLFTTALEDGEIIVRIEFPLPKRAAYSKFHHPASGYAMAGVFIAQTAGGVRVAVTGAGPGAFRWTAAEAALANGLKPAALEGVKLDSREFNNDMHADREYRANLVRVMAKRALAKL 263          
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A1F4D7I1_9PROT (Carbon monoxide dehydrogenase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4D7I1_9PROT)

HSP 1 Score: 323 bits (827), Expect = 1.070e-108
Identity = 172/240 (71.67%), Postives = 196/240 (81.67%), Query Frame = 1
Query:    4 DAKLLAGGMTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRALQKL 723
            +AKLLAGGMTLIPTLKQRLA+P+HLVDI  L EL+GI++K  +L IGAA++HH+VA SAVV+KAIPALA LA  IGDPQVRNRGT+GGSVANNDPAADYPAA L L AT+VT +REIAA D+FQGMFATAL+EGE+IV + F +PKRAAY KFPHPASGYAMAGVFVA+   G+RVAVTGAA GVFRW+ AE  LA+     AL GV L   D N DIHA   YRANL RVM KRA+ KL
Sbjct:   24 EAKLLAGGMTLIPTLKQRLARPSHLVDITQLAELQGIKLKAGRLEIGAATRHHQVAASAVVRKAIPALAQLAGVIGDPQVRNRGTLGGSVANNDPAADYPAAALGLGATIVTTQREIAADDFFQGMFATALKEGEVIVRMVFPVPKRAAYGKFPHPASGYAMAGVFVAQTGDGVRVAVTGAAPGVFRWKQAEAALARNPKAAALEGVALDASDFNSDIHADAAYRANLVRVMAKRAVAKL 263          
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A7D7PVI5_9BACT (Carbon monoxide dehydrogenase medium chain n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A7D7PVI5_9BACT)

HSP 1 Score: 321 bits (823), Expect = 4.180e-108
Identity = 169/242 (69.83%), Postives = 196/242 (80.99%), Query Frame = 1
Query:    4 DAKLLAGGMTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRALQKLLA 729
            +AK L+GGMTLIPTLK RLA PT L+D+ GL EL GIEVK   L+IGAA++H +VATS VV+ A+PALA LA  IGDPQVRNRGT+GGSVANNDPAADYP+AVL L+A V+T+KREIAA D+FQGMFATALE GE+IV I F +PK+AAY KFPHPASGYAMAGVFVA+ A+G+RVAVTGA  GVFRW  AE+ L K M+  AL  + LA DD+NEDIH TREYRA LA+VM  RA   L A
Sbjct:   24 EAKPLSGGMTLIPTLKARLANPTQLIDLNGLSELTGIEVKNGALIIGAATRHQQVATSKVVRDALPALADLASHIGDPQVRNRGTLGGSVANNDPAADYPSAVLGLNAKVITSKREIAAEDFFQGMFATALEPGELIVRIAFPLPKKAAYAKFPHPASGYAMAGVFVAQTAEGIRVAVTGAGPGVFRWSEAEQALTKSMSAAALEKLTLAADDLNEDIHGTREYRAQLAKVMAIRAAAALAA 265          
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A3N5W7K7_9PROT (Xanthine dehydrogenase family protein subunit M n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5W7K7_9PROT)

HSP 1 Score: 300 bits (767), Expect = 1.500e-99
Identity = 156/237 (65.82%), Postives = 193/237 (81.43%), Query Frame = 1
Query:    4 DAKLLAGGMTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGA-ASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRA 711
            +A+ L+GGMTL+PTLK RLAQP+ L+DI GL EL GIE K   L IGAA++++++ATS VV++ +PALA+L   + DPQVRNRGT+GGSVANNDPAAD PAAVLAL+ATV+TNKREIAA D+FQGMF TALE GE++V + F +P+ AAY KFPHPASGYA+AGVF+A+ A G+RVAVTGA ASGVFRW  AE+ LAK M+  A+  + LA DD+NEDIH +REYRA L +VM  RA
Sbjct:   24 EARPLSGGMTLLPTLKARLAQPSQLIDIAGLAELAGIENKNGVLTIGAATRYYQIATSPVVREVLPALASLVSTVADPQVRNRGTLGGSVANNDPAADSPAAVLALNATVITNKREIAADDFFQGMFTTALEPGELVVKVAFPLPRAAAYCKFPHPASGYAVAGVFIAQTAAGVRVAVTGAGASGVFRWSEAEQALAKDMSAAAIDKLTLAADDINEDIHGSREYRAQLVKVMAGRA 260          
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Match: A0A7X1TUH5_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1TUH5_9PROT)

HSP 1 Score: 290 bits (743), Expect = 1.960e-96
Identity = 153/232 (65.95%), Postives = 183/232 (78.88%), Query Frame = 1
Query:   28 MTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATSAVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDATVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPASGYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVDLATDDMNEDIHATREYRANLARVMTKRALQKL 723
            MTL+PTLKQRLA+P+HLVDIG L  LR I+    +L IGA  +H+EVA S  V++AIPALA LA+QIGDPQVRN GTIGGS+ANNDPAADYPAAVL L AT+VTN+R I A DYFQGMFATALEEGEII  + F +PK+AAYEKF HPASGYAM   FVA  ++G+RVAVTGA  GVFRW  AE+ L K +  +A+  + +   +MNED+HA+REYRANL  VMT+RA+ KL
Sbjct:    1 MTLLPTLKQRLARPSHLVDIGALGALRAIKRSQDKLSIGAGVRHYEVAFSPDVREAIPALAYLAEQIGDPQVRNLGTIGGSLANNDPAADYPAAVLGLGATIVTNRRRIKAQDYFQGMFATALEEGEIITRVSFPLPKKAAYEKFRHPASGYAMTAAFVAVTSRGVRVAVTGAGPGVFRWTKAERALGKNLAPEAVEKLSVDAQEMNEDMHASREYRANLVNVMTRRAVAKL 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14381.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3NT59_9PROT6.900e-11976.86Xanthine dehydrogenase family protein subunit M n=... [more]
A0A0S8C2G2_9PROT5.000e-11675.10Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]
A0A7C2UED0_9PROT1.250e-11474.27Xanthine dehydrogenase family protein subunit M n=... [more]
A0A1F4DHX7_9PROT1.020e-11373.33Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]
A0A1F4D4X5_9PROT2.060e-11373.44Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]
A0A1F4BMI6_9PROT3.520e-11273.44Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]
A0A1F4D7I1_9PROT1.070e-10871.67Carbon monoxide dehydrogenase n=2 Tax=unclassified... [more]
A0A7D7PVI5_9BACT4.180e-10869.83Carbon monoxide dehydrogenase medium chain n=1 Tax... [more]
A0A3N5W7K7_9PROT1.500e-9965.82Xanthine dehydrogenase family protein subunit M n=... [more]
A0A7X1TUH5_9PROT1.960e-9665.95Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14381contigP-wetherbeei_contig14381:988..1722 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121861.KB899917_gene3622
PFAMsCO_deh_flav_C,FAD_binding_5
Model size735
Max annot lvl204441|Rhodospirillales
KEGG rclassRC02800
KEGG koko:K03519
KEGG ReactionR11168
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.27e-87
EggNOG OGsCOG1319@1|root,COG1319@2|Bacteria,1MUDB@1224|Proteobacteria,2TRA8@28211|Alphaproteobacteria,2JQRH@204441|Rhodospirillales
EC1.2.5.3
DescriptionCO dehydrogenase flavoprotein C-terminal domain
Cds size708
COG categoryC
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186020.0950525-CDS-P-wetherbeei_contig14381:987..16951683186020.0950525-CDS-P-wetherbeei_contig14381:987..1695Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14381 988..1695 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186020.106701-UTR-P-wetherbeei_contig14381:1695..17221683186020.106701-UTR-P-wetherbeei_contig14381:1695..1722Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14381 1696..1722 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14381.2.1prot_P-wetherbeei_contig14381.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14381 988..1695 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14381.2.1

>prot_P-wetherbeei_contig14381.2.1 ID=prot_P-wetherbeei_contig14381.2.1|Name=mRNA_P-wetherbeei_contig14381.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=236bp
MTLIPTLKQRLAQPTHLVDIGGLPELRGIEVKGTQLVIGAASQHHEVATS
AVVKKAIPALAALADQIGDPQVRNRGTIGGSVANNDPAADYPAAVLALDA
TVVTNKREIAAGDYFQGMFATALEEGEIIVSIKFNIPKRAAYEKFPHPAS
GYAMAGVFVAEGAKGLRVAVTGAASGVFRWEAAEKVLAKKMTVDALAGVD
LATDDMNEDIHATREYRANLARVMTKRALQKLLAA*
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mRNA from alignment at P-wetherbeei_contig14381:988..1722-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14381.2.1 ID=mRNA_P-wetherbeei_contig14381.2.1|Name=mRNA_P-wetherbeei_contig14381.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig14381:988..1722- (Phaeothamnion wetherbeei SAG_119_79)
CCCGACGCCAAGCTGCTGGCCGGCGGCATGACGCTGATCCCGACGCTGAA ACAGCGGCTGGCGCAGCCCACCCATCTCGTCGATATCGGCGGTCTGCCGG AATTGCGCGGCATCGAAGTGAAGGGTACGCAACTCGTGATCGGCGCGGCG AGCCAGCACCATGAGGTCGCCACTTCCGCCGTTGTGAAGAAGGCGATTCC CGCGCTGGCGGCGCTTGCCGACCAGATCGGCGACCCGCAGGTGCGCAACC GCGGCACCATCGGCGGTTCGGTCGCCAATAACGATCCAGCGGCCGATTAT CCGGCGGCGGTGCTGGCGTTGGACGCGACGGTAGTCACCAACAAGCGCGA AATCGCCGCCGGCGATTACTTTCAGGGCATGTTCGCCACCGCGCTGGAAG AGGGCGAGATCATCGTGTCCATCAAATTCAATATTCCCAAGCGCGCGGCG TACGAAAAATTTCCGCACCCGGCGTCGGGTTATGCCATGGCCGGCGTATT CGTTGCCGAAGGCGCCAAAGGTTTGCGCGTCGCAGTCACTGGTGCCGCAT CCGGCGTGTTCCGTTGGGAAGCCGCGGAGAAAGTGCTCGCGAAAAAAATG ACCGTGGACGCGCTGGCAGGCGTCGATCTCGCGACCGACGACATGAACGA AGATATCCATGCCACGCGCGAATACCGCGCCAATCTTGCCCGGGTGATGA CCAAACGCGCGCTGCAGAAACTGCTCGCCGCGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14381:988..1722-

>mRNA_P-wetherbeei_contig14381.2.1 ID=mRNA_P-wetherbeei_contig14381.2.1|Name=mRNA_P-wetherbeei_contig14381.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig14381:988..1722- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGCTGATCCCGACGCTGAAACAGCGGCTGGCGCAGCCCACCCATCT
CGTCGATATCGGCGGTCTGCCGGAATTGCGCGGCATCGAAGTGAAGGGTA
CGCAACTCGTGATCGGCGCGGCGAGCCAGCACCATGAGGTCGCCACTTCC
GCCGTTGTGAAGAAGGCGATTCCCGCGCTGGCGGCGCTTGCCGACCAGAT
CGGCGACCCGCAGGTGCGCAACCGCGGCACCATCGGCGGTTCGGTCGCCA
ATAACGATCCAGCGGCCGATTATCCGGCGGCGGTGCTGGCGTTGGACGCG
ACGGTAGTCACCAACAAGCGCGAAATCGCCGCCGGCGATTACTTTCAGGG
CATGTTCGCCACCGCGCTGGAAGAGGGCGAGATCATCGTGTCCATCAAAT
TCAATATTCCCAAGCGCGCGGCGTACGAAAAATTTCCGCACCCGGCGTCG
GGTTATGCCATGGCCGGCGTATTCGTTGCCGAAGGCGCCAAAGGTTTGCG
CGTCGCAGTCACTGGTGCCGCATCCGGCGTGTTCCGTTGGGAAGCCGCGG
AGAAAGTGCTCGCGAAAAAAATGACCGTGGACGCGCTGGCAGGCGTCGAT
CTCGCGACCGACGACATGAACGAAGATATCCATGCCACGCGCGAATACCG
CGCCAATCTTGCCCGGGTGATGACCAAACGCGCGCTGCAGAAACTGCTCG
CCGCGTAA
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