mRNA_P-wetherbeei_contig1036.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1036.3.2
Unique NamemRNA_P-wetherbeei_contig1036.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: D8LJA1_ECTSI (Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA1_ECTSI)

HSP 1 Score: 799 bits (2063), Expect = 1.750e-276
Identity = 428/656 (65.24%), Postives = 498/656 (75.91%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAK-SQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLYRC--SAIPAEQRQVMVVKAATATVRPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGPFKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRYEAD-GHVETTPLLSTRTQKASLDTIRSYIGVTAEELPSDEICDLCVRMQLGPAALT--GGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLRRSPAPCVSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPDDTTDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTVSQVPPTEDYAGASLREGDVRFGGPWREGFSYWIRPAEDPAYFPGRCAAVMLRVDD---------EETVLGTFGVLHPEVLAAYELGYPCSAVEIDLEPLV 3208
            MPT+ + R+DLFEALG  YTE EFD LCF+FGIELDEVTSEA EL K SQG       G AA+ DV+YKIDIPANRYDLLCIEGL RAL VFLG++ +P++R    A  A  RQ M V +  A +RPYVVCAVLRGVTF+ K YKSF+DLQDKLHQNICRRRTLVA+G HDL TV+GPF YDA PP  I+FVPLTP+D G F A+ALLD YNTD + +HLKPYT IIY+SE+YP I DA+G +LSLPPVING+ SRIR+ET DVFIECTATD TKA+IVLDT+VTMFSEYC + F+ EPVDV Y+ + G V+TTPLLSTRT+KAS+  I S IGV  EE   +EIC LC +MQLGPA +   G  +G              + VTVPPTRSDILH VDV+EDVAIA+GFN IP  +PAT TVGG   +N F DLLR+E+SRAGY EMLTHGLCSRAENF MLRR   PCVSL NP  +EYEVVRT+LLPGALKT Q+N+ + VKDG++LFE SDVV+ DD+ DTGARNCRRLVATYMG  AGFE+IHGLVDRIM++ QV P+E+Y+G   R    R GGPWRE   Y I P + P +FPGRCA V+L V D          E  LG+FG+LHPEVL AY+L  P SAVEIDLEPL+
Sbjct:    1 MPTLGVNRDDLFEALGHVYTEKEFDELCFEFGIELDEVTSEAIELEKQSQGGGRAGGAG-AASTDVVYKIDIPANRYDLLCIEGLARALRVFLGKEDSPVFRTVEPAGGAGARQKMTVGSGAAKIRPYVVCAVLRGVTFNSKSYKSFMDLQDKLHQNICRRRTLVAIGAHDLNTVKGPFRYDAVPPSDIDFVPLTPSDQGTFNAKALLDLYNTDPSVKHLKPYTPIIYESEVYPVIKDANGDVLSLPPVINGHLSRIRLETTDVFIECTATDLTKANIVLDTMVTMFSEYCGDKFSVEPVDVTYDDNSGDVKTTPLLSTRTEKASVAEICSIIGVEIEE---EEICRLCTKMQLGPAEVVEMGEEEGGK-----------GIKVTVPPTRSDILHPVDVVEDVAIAYGFNKIPTTLPATLTVGGHQPLNNFGDLLREEISRAGYTEMLTHGLCSRAENFKMLRRQEEPCVSLSNPKHVEYEVVRTSLLPGALKTAQFNRAMPVKDGVRLFEISDVVVRDDSCDTGARNCRRLVATYMGPTAGFEIIHGLVDRIMSLVQVAPSEEYSGNDPR---ARVGGPWRENMRYRIDPVDRPTFFPGRCADVLLMVKDTEEGGSAGWREIRLGSFGMLHPEVLKAYDLRDPSSAVEIDLEPLM 638          
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: A0A835YVN2_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN2_9STRA)

HSP 1 Score: 741 bits (1913), Expect = 5.620e-254
Identity = 388/662 (58.61%), Postives = 469/662 (70.85%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLYRCSAIPAEQRQVMVVKAATATVRPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGPFKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRYEADGHVETTPLLSTRTQKASLDTIRSYIGVTAEELPSDEICDLCVRMQLGPAALTGGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLR----RSPAPCVSLINPAVI----EYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPDDTTDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTVSQVPPTEDYAGASLRE--GDVRFGGPWREGFSYWIRPAEDPAYFPGRCAAVMLRVDD----------EETVLGTFGVLHPEVLAAYELG-YPCSAVEIDLEPLV 3208
            MPTV +VR+DLF+ALGK YTE EFD LCF+FGIELDEVT+E  E    +               +IYK+DIPANRYDLLC+EGL RALN+FLGR + P +R     + QRQ + VK +TA +RPYVVCAVLRGVTFD + YKSFIDLQDKLHQNICRRRTLVA+GTHDL T+ GPF Y+A PP  IEFVPL P D G FKA+ALLD YNTD+  +HLKPYT IIYDS +YP + DA   + SLPPVINGYHSRI+  TR+VFIECTATD TKA+IVLDTVV MFS+ C +PFTAEPVDV YEA G+  TTPLLS+RT + ++  IR  +GV   ++  +E C LC +MQLGPA +T G               A++AVT PPTRSD+LH VDV+EDVAIA G+N +P+R P   TVG    +   CDLLR EV+RAGY E+LTHGLC R +  A+ R           +L+  AV     +YEVVRT LLPG LKT+Q+N+ ++VKDG++LFE SDVVL D TTDTGARN RRL A Y G  AGFE++HGLVDR+M + QV P   YAGAS+ +  G    GGPWREG  Y++RP ++  +FPGRCA V+LR             EE  LG+FGVLHPEVL AYE+G YP S +E+DLEPL+
Sbjct:    1 MPTVGVVRDDLFKALGKEYTEEEFDELCFEFGIELDEVTTEPAEAPGQE-------------PTIIYKLDIPANRYDLLCLEGLARALNIFLGRASPPDFRLVEPASGQRQTITVKPSTAQIRPYVVCAVLRGVTFDARTYKSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALPPQDIEFVPLVPCDRGAFKAKALLDLYNTDVAVKHLKPYTGIIYDSPVYPVVLDARRTVCSLPPVINGYHSRIQQTTRNVFIECTATDLTKANIVLDTVVAMFSQLCADPFTAEPVDVVYEATGNTATTPLLSSRTLEVAMADIRGILGV---DMAPEEACRLCAKMQLGPATVTQGG--------------AAIAVTAPPTRSDVLHAVDVVEDVAIAHGYNALPLRAPRAHTVGAPQPLAAVCDLLRAEVARAGYAELLTHGLCDRRDLVAVARCEGGEEGPQAAALLGQAVALGDADYEVVRTTLLPGVLKTLQHNRSLSVKDGLRLFEISDVVLQDPTTDTGARNVRRLCALYTGNTAGFEIVHGLVDRVMQLLQVVPAASYAGASVSKAAGGAIEGGPWREGLEYFVRPVDNRTFFPGRCADVVLRRSGXXXXXXXSGAEEVRLGSFGVLHPEVLHAYEVGEYPASVLEMDLEPLM 632          
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: W7TXC3_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXC3_9STRA)

HSP 1 Score: 715 bits (1845), Expect = 7.440e-244
Identity = 380/648 (58.64%), Postives = 469/648 (72.38%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLYRCSAIPAEQ---RQVMVVKAATATVRPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGPFKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRYEA-DGHVETTPLLSTRTQKASLDTIRSYIGVTAEELPSDEICDLCVRMQLGPAALTGGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLRRSPAPCVSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPDDTTDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTVSQVPPTEDYAGASLREGDVRFGGPWREGFSYWIRPAEDPAYFPGRCAAVMLRVDDEETV---LGTFGVLHPEVLAAYELGYPCSAVEIDLEPLV 3208
            MPT+++VR+DLF ALGK YT+ EF  +CF FGIELDE+T+E E  +K  G+         A   V+YK+D+PANRYD+LC+EGLTRAL +FL    AP YR    P +    R VM V+A+TA+VRP+V CA+LR +TFD   YKSFIDLQ+ LH+NICRRRTLVA+GTHDL T+RGPF Y A  P +I+F PLT  D   F A+ LLDFY TD +A+HL PYT IIY++  YP ++D+ G +LSLPPVING HSRI ++TR+VFIECTATDKTKA+IVLDTVVTMFS++C  PFT EPVDV YE  +  VETTPLLSTR   A +  I   +G    +L  + +C LC +MQLGPA+    TD              +V VTVPPTRSD+LH VDVIEDVAIAFG+NN+PI++P T TVG  L IN F DLLRDE++RAGY E+LTHGLCSRAENFA LRR     VSL NPA  EYE+VRT LLPG LK +Q+N+   VKDG++ FE SDVVL DD TD GA+N RRLVA+   M AGFE IHGLVDR+M + Q+ PTE YAG S+R G+ R     ++   Y+I P++DPAYFPGRCA V+L  D +++    +GTFGVLHPEVL AY++ +P S +EIDLEPL+
Sbjct:    1 MPTISLVRDDLFNALGKSYTDDEFQDVCFAFGIELDEITTEGELASKDAGSKGKCGPDGGA---VVYKVDVPANRYDILCMEGLTRALRIFLELDKAPSYR-KVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPRYPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQHCARPFTVEPVDVVYEGPELSVETTPLLSTRKVAAKMSEIEGLVG---RDLGPELVCQLCNKMQLGPASYHAETD--------------TVVVTVPPTRSDVLHAVDVIEDVAIAFGYNNLPIKVPGTLTVGAPLPINAFSDLLRDEIARAGYLEVLTHGLCSRAENFAKLRRPETKAVSLSNPANEEYEIVRTTLLPGLLKVLQHNRAAQVKDGLRFFEISDVVLRDDHTDVGAKNIRRLVASSTSMVAGFESIHGLVDRVMLLVQIGPTEAYAGNSMR-GEERMAV-LKDKIQYYIVPSDDPAYFPGRCADVILVEDGKKSKPLKVGTFGVLHPEVLKAYDIPFPTSMLEIDLEPLI 625          
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: A0A7S4IXX5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IXX5_9STRA)

HSP 1 Score: 654 bits (1688), Expect = 7.830e-220
Identity = 351/669 (52.47%), Postives = 457/669 (68.31%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLY--RCSAIPAEQRQVMVVKAATATVRPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGP-FKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRYEADGHVET----TPLLSTRTQKASLDTIRSYIGVTAEELPSDEICDLCVRMQLGPAALTGGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLRRSPAPCVSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPDD-----TTDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTVSQVPPTEDYAGASLREGDVRFGGPWREGFSYWIRPAEDP----------AYFPGRCAAVMLRVDDEE------TVLGTFGVLHPEVLAAYELGYPCSAVEIDLEPLV 3208
            MPT+ + R+DLF ALG+ YT+ EFD LCF+FG+ELDE+TSE E+  KS       E  S  +D V+YKID+PANRYDLLCIEGLTRA+ VFLG   +P Y  +  A P++  +++V+++ T+TVRPYVVCA+LR +TF+ +RY+SFI+LQD+LH+N+CR RTLVA+GTHD+  V GP+ YDA+ PD IEFVPLT  D G  F  RALL+ Y  D + +HLKPY  II DS LYP + D + V+LSLPP+ING  S+I ++TR+VF+ECTATD TKA+IVLDTVV MFSEYC +PF+ EPV V Y  +   ET    TP +  R ++A +D + S +G+  +E P + + +LC ++QLGPAAL    D D      E        VTVPPTRSDILH VD+ EDV IA+G+NNI  R+P T TVGG   +N   DLLRDE+ RAGY E+LTHGLCS  +NF  LRR  A  VSL+NPA +EY+VVRT LLPG LKT+Q+NK  +  +G K+FE SDVVLPDD      T  GARN RRL A Y G  +GFEV+HGLVDR+MT+++V P   YA  S +  + +F    +EG+ Y IRP  +            YFPGR A ++L     +        +GTFG++HPEVL  +++ YP S +E+DLE L+
Sbjct:    1 MPTLPVQRDDLFAALGRTYTDDEFDELCFEFGVELDEITSEREDALKSDTVKLSREEISKLSDSVVYKIDVPANRYDLLCIEGLTRAIKVFLGDMHSPTYNVKAPAEPSDVNKMVVMESNTSTVRPYVVCAILRDITFNARRYQSFIELQDQLHRNLCRNRTLVAIGTHDMDAVAGPWKYDARNPDDIEFVPLTHDDSGASFTGRALLEHYEKDPSCKHLKPYVPIIKDSPLYPVVLDGNEVVLSLPPIINGARSKISVDTRNVFVECTATDLTKANIVLDTVVAMFSEYCADPFSVEPVTVSYVDESGTETSSYVTPRMYARRERAGVDFVNSLVGI--DENP-ERMIELCDKLQLGPAALV--LDEDTGKRMLE--------VTVPPTRSDILHPVDIAEDVGIAYGYNNIVKRVPVTSTVGGEQPLNKLGDLLRDEIGRAGYTEVLTHGLCSIRDNFTALRRDVAAAVSLLNPANVEYQVVRTTLLPGLLKTLQHNKSASFANGFKIFEISDVVLPDDGYTVTETAVGARNVRRLAAIYAGPTSGFEVVHGLVDRVMTLTEVAPERAYASNSGKTEEEKFRVS-KEGWEYTIRPLSEAEEGERGGVAGTYFPGRAAEILLTKPGSDGGTTKKVRIGTFGIIHPEVLQNFDVQYPASCLELDLEQLM 655          
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: A0A6G0WW67_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW67_9STRA)

HSP 1 Score: 643 bits (1659), Expect = 3.520e-216
Identity = 351/646 (54.33%), Postives = 433/646 (67.03%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLYRCSAIPAEQRQVMVVKAATATVRPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGPFKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRYEADGHVETTPLLSTRTQKASLDTIRSYIGVTAEELPSD--EICDLCVRMQLGPAALTGGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLRRSP--APCVSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPDDTTDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTVSQVPPTEDYAGASLREGDVRFGGPWREGFSYWIRPAEDPAYFPGRCAAVM-LRVDDEETVLGTFGVLHPEVLAAYELGYPCSAVEIDLEPLV 3208
            MPTV + R++LF A+G+ +T+ EFD LCF+FGIELD++TSE +   K QG  A    G  A+D VIYKID+PANRYDLLC+EG+  AL VF+ ++  P+++  A PA  R  + VK     +RPYVV  VLRGVTF+Q RY+SFIDLQDKLHQNICRRRTLVA+GTHDL T+ GPF Y+AQ P  I+FVPL+ +    F A+ LLD Y T   A+HLKPYT IIYD   YP I+D +  +LSLPP+IN  HS+I++ TR+VFIECTATD TK +IVL+TV+ MFS+YC  PFT EPV++ YE DGH ETTP LS R   A +  I S +    E +  D   IC+LC +MQL  + L                A  S+ V VPPTR+DILH VDV+EDV IA+GFNNIPI  P T TVGG   +N   D LRDE+SRAGY E+LTHGLCS  ENF  L+R       V L NPA IE+EVVRT ++PG LKT+Q NKG++ KDG+KLFE SDVV+ D  +D GA+N RRL A Y G   GFE+IHGLVDR+M +  V          L E   R          Y I P+ DP +F GRCA ++  R    +T LGTFGVLHP+VL  YEL YP S VE+D+EPLV
Sbjct:    1 MPTVGVKRDELFAAIGQTFTDDEFDHLCFEFGIELDDITSERQIKQKEQGVNA----GIDASDAVIYKIDVPANRYDLLCVEGIACALRVFMKKELPPVFKIVAPPAPHR--ITVKKGLEKIRPYVVSCVLRGVTFNQARYESFIDLQDKLHQNICRRRTLVAIGTHDLDTIEGPFTYEAQTPSDIKFVPLSQSR--KFNAKELLDHYRTSPDAKHLKPYTDIIYDFPAYPIIYDKNRTVLSLPPIINSEHSKIKLTTRNVFIECTATDITKGNIVLNTVIAMFSQYCDAPFTVEPVEITYENDGHHETTPDLSNREVVAKVKDIHSMLFGKREPIDLDVQRICELCTKMQLDASYLE---------------AEHSIKVQVPPTRADILHAVDVMEDVGIAYGFNNIPITYPPTLTVGGAQPLNKLGDQLRDEISRAGYIELLTHGLCSHDENFKFLQRKDDGESAVVLSNPATIEFEVVRTTMIPGVLKTVQNNKGMSFKDGLKLFEVSDVVVLDKASDVGAKNIRRLCALYTGQTDGFEIIHGLVDRVMQLIGVK-------CILEEDHDRDN-------YYAIVPSADPTFFEGRCADIVWTRAGQADTKLGTFGVLHPQVLNNYELLYPASVVEMDIEPLV 609          
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: A0A7S2BNL5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNL5_9STRA)

HSP 1 Score: 644 bits (1660), Expect = 5.540e-216
Identity = 371/649 (57.16%), Postives = 435/649 (67.03%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLYRCSAIPAEQRQVMVVKAATATV--RPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGPFKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRYE-ADGHV---ETTPLLSTRTQKASLDTIRSYIGVTAEELPSDEICDLCVRMQLGPAALTGGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNI-PIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLRR-SPAPCVSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPDDTTDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTVSQVPPTEDYAGASLREGDVRFGGPWREGFSYWIRPAEDPAYFPGRCAAVMLRVDDEETV-LGTFGVLHPEVLAA--YELGYPCSAVEIDLE 3199
            MPTV ++R+DLFE LG+ YTE EFD LCF+FGIELDEVTSEAE   K Q   A+  + +     VIYKIDIPANRYDLLCIEG+TRAL +F G   AP YR   +  EQ QVM VK+A      RP+VV AVLRG+TFD+K YKSFIDLQDKLHQNICR R LVA+GTHDL T+ GPF YDA   + I  VPLT  D  P  A+ LLD YNTD   +HLKPYT +IYDSE YP I DA G +LS+PP+ING+HSRI++ T++V IE TATD TKA IVLDTVVTMFSEYC E FT EPV V YE  DG     E TP LSTRTQ+ASL  I SYI V   EL    +C+LC +MQLGP A+    D D             + VT+PPTRSDILHEVD++EDVAIA+GFN + P  MPAT TVG  L IN   DLLRDEV+RAGY E+LTHGLC RAE F   RR      VSL NPA  EYEVVRT+LL G LKT+  NK + +K+GIK FE SDVVL D   D GARN R L A Y G   GFEV+HGL+DR+MT++Q                V  GG    G +Y +  + DP Y  GR   VML +   E V +G  G +HPEVLA   ++L  PCSA+E+++E
Sbjct:   23 MPTVGVIRDDLFERLGRTYTEEEFDELCFEFGIELDEVTSEAEMATKEQKGKALEGLDTT----VIYKIDIPANRYDLLCIEGITRALRIFKGLDPAPTYRM--LEPEQPQVMRVKSANCKTVPRPFVVSAVLRGMTFDEKAYKSFIDLQDKLHQNICRERKLVAIGTHDLDTIEGPFTYDAPLREDISLVPLTTTDGQPVGAKDLLDHYNTDEGCKHLKPYTKLIYDSERYPLITDAKGTVLSMPPIINGHHSRIQLHTKNVLIEATATDHTKAHIVLDTVVTMFSEYCAEKFTVEPVTVIYENEDGSEDWREVTPRLSTRTQEASLKEICSYIDV---ELEGPLVCELCTKMQLGPVAMI---DDDM------------LRVTIPPTRSDILHEVDIVEDVAIAYGFNKLLPGTMPATLTVGAPLPINHLSDLLRDEVARAGYTEVLTHGLCMRAEVFGFFRRLDDGSAVSLSNPANREYEVVRTSLLVGLLKTIGANKSMPIKNGIKFFEISDVVLQDPENDVGARNERHLAAVYTGFTDGFEVLHGLLDRVMTLNQ----------------VALGGD--SGRTYRLEASTDPLYLEGRQGKVMLYLAGREPVCVGYVGAIHPEVLAKDKFDLDNPCSALELNIE 629          
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: A0A7S1U5G5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5G5_9STRA)

HSP 1 Score: 646 bits (1666), Expect = 8.760e-216
Identity = 368/684 (53.80%), Postives = 455/684 (66.52%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLYRC--SAIPAEQRQVMVVKAATATVRPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGPFKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRYEADG-HVETTPLLSTRTQKASLDTIRSYIGVTAEELPSDEICDLCVRMQLGPAA-LTGGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLRRSPAPC----VSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPD------------DTTDTGARNCRRLVATYMGM-AAGFEVIHGLVDRIMTVSQVP----------PTEDYAGASLREGDVRFGGPW---REGFSYWIRPAEDPAYFPGRCAAVML-RVDDEETVL-----GTFGVLHPEVLAAYEL----GYPCSAVEIDLEPL 3205
            MPTV +VR+DLFEALG+ YT+ EF+ LCF+FG+ELD+VTSEAE+  K    +A A++     ++VIYKID+PANRYDLLCIEG+ RAL +FLG Q AP Y     A  A  R  M V+A TA VRP+VVCAVLRGVTF  KRY+SFI+LQDKLHQNICRRRTLVA+GTHDLAT+  PF Y A PP  I FVPLT  +   F  +ALLD Y TD   +HL PY  IIYD   YP I+DA+  +LSLPP+ING HSRIR++TRDVFIECTATD TKA+IVLDTVVTMFSE+C +PF+ E VDV YEA+G  V+TTP ++ R+ +A++  + S +G+   ++  + +C+LC +MQLGPA  +  G D          G    + VTVPPTR DI+H VDVIED+ +A+GFNNI   +P T TVG    +N FCDLLRDE++RAG+ E LTHGLCS  EN+ MLRR         VSL NPA  EYE+VRT+LLPG LKT+Q N+G A+   +K+FE SDVV  D            D    GARN RRL A Y  M  +GFEVIHGLV R+M V Q+P           T D      +   +  GG     R G +Y +   +DP +FPGRCA V L R+  ++ VL     G FGV+HPEVLA Y L     YP S +E+DLEPL
Sbjct:   34 MPTVGVVRDDLFEALGRTYTQDEFELLCFEFGVELDDVTSEAEQARKMNKDSAAADLS----EEVIYKIDVPANRYDLLCIEGIARALRIFLGTQPAPTYEVLEPAAGAGARLAMTVEAPTAGVRPHVVCAVLRGVTFTPKRYQSFIELQDKLHQNICRRRTLVAIGTHDLATLTPPFRYRALPPTDINFVPLTEEERS-FDGKALLDHYKTDGQCKHLAPYVDIIYDEPNYPVIYDAEDRVLSLPPIINGRHSRIRLDTRDVFIECTATDYTKANIVLDTVVTMFSEHCDKPFSVEKVDVIYEAEGGRVDTTPKMTVRSDQAAVADVNSLVGI---DITPERMCELCDKMQLGPATHVPEGPDSGP-------GKGGLIRVTVPPTRHDIMHSVDVIEDIGVAYGFNNIVKTVPETLTVGAPQPLNHFCDLLRDEIARAGFSETLTHGLCSIRENYEMLRRDSEAAATEYVSLSNPANEEYEIVRTSLLPGMLKTLQANRGTALSVPLKIFEISDVVFRDLEFTTPSVSGPYDLGVVGARNARRLSALYASMQGSGFEVIHGLVTRVMQVVQLPHLLQVRESAKTTTDGEEEDKKWSMIPPGGQTLAPRPGLAYRVAAGDDPCFFPGRCAEVFLCRLGADDAVLSEERVGLFGVVHPEVLANYGLVKIHAYPTSVLELDLEPL 702          
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: K0SRH2_THAOC (Phenylalanine--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SRH2_THAOC)

HSP 1 Score: 637 bits (1643), Expect = 2.390e-213
Identity = 357/654 (54.59%), Postives = 444/654 (67.89%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLYRCSAIPAEQRQVM-VVKAATATVRPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCG-PFKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRY-EADGHVE---TTPLLSTRTQKASLDTIRSYIGVTAEELPSDEICDLCVRMQLGPAALTGGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLRRSPAPCVSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPDDT-----TDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTVSQVPPTEDYAGASLREGDVRFGGPWREGFSYWIRPAE-DPAYFPGRCAAVML-RVDDEETVLGTFGVLHPEVLAAYELGYPCSAVEIDLEPLV 3208
            MPTV++ R+ LF  LG+ YT+ EFD LCF+FG+ELDEVTSE EE  KS+      +  +A +D+V+YKID+PANRYDLLCIEG++R+L VFLG   AP Y       E    M VV+A   TVRPYVVCAVLR VTFD +RY+SFI+LQD+LH+N+CR+RTLVA+GTHDL +VRGPF YDA+ P  I+FVPLT  D G  F  R L++ Y T+   +HLKPY  II DS LYP + D++G +LSLPP+ING  SRI ++T++VFIECTATD TKA+IVLDTVV MFSEY   PFT EPV V Y +A G V     TP + TR + A +D + S IG++ E   S ++ DLC R+QLGPA +    DG       E        VTVPPTRSDILH VDV EDV IA G+NNI   +P T TVG    +N   DLLRDE+ RAGY E+LTHGLCS A+NF  L R     V L NPA +EYEVVRT LLPG LKT+Q+NK ++   G KLFE SDVVLPD       T  GARN RR+ AT+ G ++GFE+IHGLVDRIMT+ +V P   Y  +S   G        +EG+ Y IR    D +YFPGR A V+L R   +    G+FG+LHP+VL A+++ YP SAVE++LE L+
Sbjct:    1 MPTVSVGRDALFAHLGRTYTDDEFDELCFEFGVELDEVTSEREEATKSETVKLSKDQIAALSDEVVYKIDVPANRYDLLCIEGISRSLKVFLGDMDAPSYEVLEPSHEASSTMTVVQANVDTVRPYVVCAVLRDVTFDPERYQSFIELQDQLHRNLCRQRTLVAIGTHDLDSVRGPFTYDARAPGEIKFVPLTHTDEGREFDGRELMEHYETEPACKHLKPYVPIIKDSPLYPVVLDSEGTVLSLPPIINGSKSRITLDTKNVFIECTATDLTKANIVLDTVVAMFSEYAARPFTVEPVTVSYVDAAGGVARSYVTPQMYTRKETAKVDFVNSLIGISVE---SSKMADLCNRIQLGPARII--PDGQTGEDVLE--------VTVPPTRSDILHAVDVAEDVGIAHGYNNIVRTVPGTCTVGREQPLNQLGDLLRDEIGRAGYTEVLTHGLCSTADNFTALGRPVTAAVKLSNPANVEYEVVRTTLLPGLLKTLQHNKSMSFAGGFKLFEISDVVLPDSECVVSETVVGARNSRRVCATFTGPSSGFEIIHGLVDRIMTLCEVAPEAGYVASS---GSAYKSVYCKEGWEYTIRELRGDGSYFPGRGAEVLLKRPGGDFEPAGSFGILHPDVLRAFDVLYPTSAVELNLEKLL 638          
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: A0A024TNG4_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNG4_9STRA)

HSP 1 Score: 633 bits (1632), Expect = 4.330e-212
Identity = 351/649 (54.08%), Postives = 433/649 (66.72%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLYRCSAIPAEQRQV--MVVKAATA--TVRPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGPFKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRYEADGHVETTPLLSTRTQKASLDTIRSYIGVTAEELPSD--EICDLCVRMQLGPAALTGGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLRR--SPAPCVSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPDDTTDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTVSQVPPTEDYAGASLREGDVRFGGPWREGFSYWIRPAEDPAYFPGRCAAVMLRVDDEETVLGTFGVLHPEVLAAYELGYPCSAVEIDLEPLV 3208
            MPTV + R++LF A+G+ +T+ EFD LCF+FGIELD+VTSE +   K QG  A   +G  A D +IYKID+PANRYDLLC+EG+ RAL VF+ ++  P+++   +PA+  +V  + VK      T+RPY V  VLRGVTF Q RY SFIDLQDKLHQNICRRRTLVA+GTHDL T+ GPF Y+AQ P  I FVPL+ +    F A+ LLD Y T   ++HLKPYT IIYD   YP I+D +  +LSLPP+IN  HS+I++ TR+VFIECTATD TKA+IVL+TV+ MFS+YC  PFT EPV+V YE DGH E TP LS R     +D I S +      +  D   ICDLCV+MQL    L      D            S+ V VPPTRSDILH VDV+EDV IA+GF+NIP+  P T TVGGG  +N   D LRDE+SRAGY E+LTHGLCS  ENF  L R  +    V L NPA IE+EVVRT ++PG LKT+Q NKG++ KDG+KLFE SDVV+ +  +D GA N RRL A Y G   GFEVIHGLVDR+M +  V    D   A+             E + Y I P+ +P +F GRCA ++   D  +  LGTFGVLHPEVL  YEL YP S VE+D+EPLV
Sbjct:    1 MPTVGVKRDELFAAIGQTFTDEEFDHLCFEFGIELDDVTSERQIKQKEQGVNAA--IG--ADDTIIYKIDVPANRYDLLCVEGIARALRVFMKKELPPVFQV--VPAKNHEVHRLTVKHGNGLETIRPYAVSCVLRGVTFTQARYDSFIDLQDKLHQNICRRRTLVAIGTHDLDTIEGPFTYEAQAPSDISFVPLSQSRV--FNAKELLDHYRTSPDSKHLKPYTDIIYDFPAYPVIYDKNRTVLSLPPIINSEHSKIKLSTRNVFIECTATDITKANIVLNTVIAMFSQYCDAPFTVEPVEVMYERDGHREVTPDLSNRQVVTKVDDIHSMLFGKRPVIDLDVQRICDLCVKMQLCATYLP-----DVH----------SIEVQVPPTRSDILHAVDVMEDVGIAYGFDNIPVTFPPTLTVGGGQPLNKLGDHLRDEISRAGYIELLTHGLCSHDENFKFLNRHDNSTSAVVLSNPATIEFEVVRTTMIPGVLKTVQNNKGMSFKDGLKLFEISDVVVLNPASDVGASNIRRLCALYTGQTDGFEVIHGLVDRVMQLIGVQCVLDPEHAT-------------ENY-YSIIPSSNPTFFEGRCADIVWHRDGGKIKLGTFGVLHPEVLNNYELLYPASVVEMDIEPLV 612          
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Match: A0A8K1FBR6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBR6_PYTOL)

HSP 1 Score: 632 bits (1630), Expect = 9.900e-212
Identity = 342/647 (52.86%), Postives = 435/647 (67.23%), Query Frame = 2
Query: 1286 MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQGAAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLYRCSAIPAEQRQVMVVKAATATVRPYVVCAVLRGVTFDQKRYKSFIDLQDKLHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGPFKARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGYHSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVRYEADGHV-ETTPLLSTRTQKASLDTIRSYIGVTAE--ELPSDEICDLCVRMQLGPAALTGGTDGDXXXXXXEIGAPASVAVTVPPTRSDILHEVDVIEDVAIAFGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRAENFAMLRRSP--APCVSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDGIKLFETSDVVLPDDTTDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTVSQVPPTEDYAGASLREGDVRFGGPWREGFSYWIRPAEDPAYFPGRCAAVML-RVDDEETVLGTFGVLHPEVLAAYELGYPCSAVEIDLEPLV 3208
            MPTV + R++LF A+G+ YT+ EFD LCF+FGIELD++TSE     + QG    +E  S   D+V+YKID+PANRYDLLC+EG+ RAL +FL ++  P Y+         Q + VK +T ++RP+VV A+LR V F Q+RY SFIDLQDKLHQNICRRRTLVA+GTHDL T+ GPF Y+A  PD I+FVPL+      F+A+ LLDFY T++  +HLKPYT IIYDS +YP I D +GV+LSLPP+ING HS+I + T++VFIECTATD TKA +VL+TV+ MFSEYC EPFT EPV++ YE D    E TP LS R+ + ++  I S +    E   L  + IC+LC +MQL                         + V VPPTRSDILH +DV+EDV IA+GFNNIP+ +P+T T+GG   +N   D LRDE+SRAGY E+LTHGLCS  ENF  L R+   A  V L NPA IE+EVVRT++LPG LKT+Q NK ++VKDG+KLFE SDVV+ D TTD GARN RR+ A+Y G   GFEVIHGLVDRI  +  +    +         +            Y I P+ D  YFPGR A ++L R D +   LGT+GVLHPEVL  ++L +P S VE+DLEPLV
Sbjct:    1 MPTVGVKRDELFAAMGQTYTDEEFDHLCFEFGIELDDITSEKALKQREQGKTDKSEELS---DEVLYKIDVPANRYDLLCVEGIARALRIFLQKEKPPQYKLVPPATGAPQQVTVKPSTKSIRPFVVSAILRNVKFTQERYDSFIDLQDKLHQNICRRRTLVAIGTHDLDTIEGPFTYNALSPDQIKFVPLS--QTREFQAKELLDFYRTNVEVKHLKPYTDIIYDSPVYPVITDKNGVVLSLPPIINGEHSKITINTKNVFIECTATDITKAHVVLNTVIAMFSEYCAEPFTVEPVNIVYEEDASQNEQTPNLSNRSVEVNVKDIFSMLFGKREPVNLDIERICELCDKMQLAAKPTAD---------------QQRIVVDVPPTRSDILHPIDVVEDVGIAYGFNNIPLTIPSTMTIGGAQPLNKLGDHLRDEISRAGYIELLTHGLCSHDENFKFLNRTDDGASAVVLANPATIEFEVVRTSMLPGVLKTIQNNKSMSVKDGLKLFEISDVVVLDKTTDVGARNVRRICASYTGHTDGFEVIHGLVDRIFQLLGIRGLVENPEVVKTLPEY-----------YAIEPSNDNTYFPGRSANIVLYRKDQQPLKLGTYGVLHPEVLRNFDLLHPTSVVEMDLEPLV 616          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1036.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA1_ECTSI1.750e-27665.24Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxI... [more]
A0A835YVN2_9STRA5.620e-25458.61Phenylalanine--tRNA ligase n=1 Tax=Tribonema minus... [more]
W7TXC3_9STRA7.440e-24458.64Phenylalanine--tRNA ligase n=2 Tax=Monodopsidaceae... [more]
A0A7S4IXX5_9STRA7.830e-22052.47Phenylalanine--tRNA ligase n=1 Tax=Odontella aurit... [more]
A0A6G0WW67_9STRA3.520e-21654.33Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces eut... [more]
A0A7S2BNL5_9STRA5.540e-21657.16Phenylalanine--tRNA ligase n=1 Tax=Dictyocha specu... [more]
A0A7S1U5G5_9STRA8.760e-21653.80Phenylalanine--tRNA ligase n=1 Tax=Phaeomonas parv... [more]
K0SRH2_THAOC2.390e-21354.59Phenylalanine--tRNA ligase n=1 Tax=Thalassiosira o... [more]
A0A024TNG4_9STRA4.330e-21254.08Phenylalanine--tRNA ligase n=2 Tax=Aphanomyces inv... [more]
A0A8K1FBR6_PYTOL9.900e-21252.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1036contigP-wetherbeei_contig1036:1761..7309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJA1
PFAMsB3_4,B5
Model size3462
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K01890
KEGG ReactionR03660
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
Exons9
Evalue1.11e-284
EggNOG OGsCOG0072@1|root,KOG2472@2759|Eukaryota
Ec32 ortholog descriptionDNA binding domain, putative
Ec32 orthologEc-02_005310.1
EC6.1.1.20
Descriptionphenylalanine-tRNA ligase activity
Cds size1926
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1036.3.2prot_P-wetherbeei_contig1036.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1036 3198..7058 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185865.4367561-UTR-P-wetherbeei_contig1036:1760..22021683185865.4367561-UTR-P-wetherbeei_contig1036:1760..2202Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1036 1761..2202 +
1683185865.4455304-UTR-P-wetherbeei_contig1036:2354..31971683185865.4455304-UTR-P-wetherbeei_contig1036:2354..3197Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1036 2355..3197 +
1683185865.512406-UTR-P-wetherbeei_contig1036:7058..73091683185865.512406-UTR-P-wetherbeei_contig1036:7058..7309Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1036 7059..7309 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185865.4524856-CDS-P-wetherbeei_contig1036:3197..33441683185865.4524856-CDS-P-wetherbeei_contig1036:3197..3344Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1036 3198..3344 +
1683185865.4599614-CDS-P-wetherbeei_contig1036:3476..37791683185865.4599614-CDS-P-wetherbeei_contig1036:3476..3779Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1036 3477..3779 +
1683185865.4673176-CDS-P-wetherbeei_contig1036:4053..42871683185865.4673176-CDS-P-wetherbeei_contig1036:4053..4287Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1036 4054..4287 +
1683185865.4749765-CDS-P-wetherbeei_contig1036:4717..48911683185865.4749765-CDS-P-wetherbeei_contig1036:4717..4891Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1036 4718..4891 +
1683185865.4824882-CDS-P-wetherbeei_contig1036:5123..55541683185865.4824882-CDS-P-wetherbeei_contig1036:5123..5554Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1036 5124..5554 +
1683185865.490109-CDS-P-wetherbeei_contig1036:5939..61441683185865.490109-CDS-P-wetherbeei_contig1036:5939..6144Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1036 5940..6144 +
1683185865.4974792-CDS-P-wetherbeei_contig1036:6357..65191683185865.4974792-CDS-P-wetherbeei_contig1036:6357..6519Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1036 6358..6519 +
1683185865.5048091-CDS-P-wetherbeei_contig1036:6788..70581683185865.5048091-CDS-P-wetherbeei_contig1036:6788..7058Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1036 6789..7058 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1036.3.2

>prot_P-wetherbeei_contig1036.3.2 ID=prot_P-wetherbeei_contig1036.3.2|Name=mRNA_P-wetherbeei_contig1036.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=642bp
MPTVNIVREDLFEALGKRYTEGEFDALCFDFGIELDEVTSEAEELAKSQG
AAAVAEVGSAAADDVIYKIDIPANRYDLLCIEGLTRALNVFLGRQAAPLY
RCSAIPAEQRQVMVVKAATATVRPYVVCAVLRGVTFDQKRYKSFIDLQDK
LHQNICRRRTLVAVGTHDLATVRGPFVYDAQPPDAIEFVPLTPADCGPFK
ARALLDFYNTDLTARHLKPYTSIIYDSELYPCIFDADGVLLSLPPVINGY
HSRIRMETRDVFIECTATDKTKASIVLDTVVTMFSEYCTEPFTAEPVDVR
YEADGHVETTPLLSTRTQKASLDTIRSYIGVTAEELPSDEICDLCVRMQL
GPAALTGGTDGDGGGGGGEIGAPASVAVTVPPTRSDILHEVDVIEDVAIA
FGFNNIPIRMPATQTVGGGLRINGFCDLLRDEVSRAGYCEMLTHGLCSRA
ENFAMLRRSPAPCVSLINPAVIEYEVVRTALLPGALKTMQYNKGIAVKDG
IKLFETSDVVLPDDTTDTGARNCRRLVATYMGMAAGFEVIHGLVDRIMTV
SQVPPTEDYAGASLREGDVRFGGPWREGFSYWIRPAEDPAYFPGRCAAVM
LRVDDEETVLGTFGVLHPEVLAAYELGYPCSAVEIDLEPLV*
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mRNA from alignment at P-wetherbeei_contig1036:1761..7309+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1036.3.2 ID=mRNA_P-wetherbeei_contig1036.3.2|Name=mRNA_P-wetherbeei_contig1036.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5549bp|location=Sequence derived from alignment at P-wetherbeei_contig1036:1761..7309+ (Phaeothamnion wetherbeei SAG_119_79)
ACGATGGGCAACGCGGGCGGACGAGACAGCCTCAGCCCTCCGCCATCGAA GGAAGGCGGCCGTCCGTCTTCTCTTCCTCTGTCGGATCTTCCACGGGTGG AAGAAAAACGAGCACCTTCCCCTAGGCGACTCGTGGCAGCTCTTCGGCGC AGCCTCACGCCAAGCCCGCGAGGCAGACAAGGACGAAAAGCGCTGCACCG GCCTGATGAACAAGAGGCATCAGCGCTGTGGGCTTCATTTGCGAAAGGCG TTGACCGAGACACTTCCCTCAGTCGCAGCAGCTTTGATCGAGTGGTCGGC CGGACGCCCGAGACGAAGGCCGTCGCGGAGCTGGCTTTCTCCGCCTTTGA TGTGAATGGCGACGGGCGATTGACGTACGACGAATTCTTGAACGGGATGT TGGTTCTGAAAGGCATGTCGAGCGAGGAGGACAAGATCGCGTGTAAGTGA GCATTACATTCAGATCCTTTGCCGCACTTCAGGCGTCCTTCCAATAACAT ACATATTGATGCGCAAAAGATGGGAGAAATATCCCTCCTCTTGAATTTAT TTTCTTCCATCATCCTCTCCCTGCATCCACCCCAAAACGTGCAGTCTTCT TTCGAGCGTTCGACCTCGACGGCGACGGCCGGCTCGGCTCTTCGGACCTC GCCAACCTCTTGCGCGTAGTGCTGCCGCGGGGCAACATCCCGGCCACTGA GCAGGAGATTGCCAGCGCGGTCCTATTCACGCTACGATCAATACGAGAAC TTGATGGAGGCCCCGCTTCGGCGCCCGCCAGCCCGGCGGCAAGCCCGCGG CAGGTGGTCACGCCACCGCCGAGGAGAAGCAGCCCCATCCGGCGCAGCAG AAGCCCGCCTGCTTCGCCAAAGAGCAAGCTGCCGGAAGGACTAACGCTGC TCCAGTTTTCAGCGTGGGCAGTGTTGCACCCGCGGGCGTTGGACACCCCC GGGGACCACTTCATGCACGCCATTAGCGGCATGGCGCCATCCTTCTTCCA AGAGCACCGCGTGGAGGAGCAACGGCCGGCGGTGGCGACGCCGGAGGCTG CGTTGCCAACCACCGTCGATGCCGGCGCGGCCGCTGCGGATGCCGTGGGA GATTCGGGTGGCTGCGGAGGTTGAGCGGGTCTGGAGCTCTAGTTTGGCTG GTCTATTAACCAAACTCACGCAGCAGGTAGCCTGTTTGGTGGGTTGTGGG GTGGAGCGGATGATTCGTGCATCAACAACTGTTCATTCCCAAAATGCAGG ATCGCCAAACAAAGAGCGCCCATACAACTTTGGATCTCTTTGCGTGCTCT CAGCTAGGGGCCACAGGAGGGATTAGAATCGGTCGAGAAGGGAGAGAGAT CGCTCGCACCACACACATCTTTCGACACGAAATACCGATTGCCACAATCA CGCGAACAGAATTTGACGGCTTGCCAACCTTTTCTAAATGCCGACTGTGA ACATCGTCCGCGAGGACCTCTTTGAGGCCCTCGGAAAACGATACACCGAA GGGGAGTTCGATGCGCTCTGCTTCGACTTCGGCATTGAACTGGACGAGGT GACGAGCGAAGCAGAGGAGCTAGCAAAATCCCAGGTAGGTTCGTCTCTTT TCTCTCGTCTTGCTTTCTGCTTTGCCGTTCAAGAAAAGAAACAAATGTGC AGCTATTAACAATGTTCTCACTCACCTTCCTTCGAGATCTTTCCTCCTTA TCGCCGACGCAACCAGGGGGCCGCAGCCGTTGCCGAAGTGGGGAGCGCCG CCGCCGACGATGTCATCTATAAGATTGACATTCCGGCAAATCGCTACGAC CTCCTCTGCATTGAGGGCCTGACGCGGGCGCTGAACGTTTTCCTTGGAAG ACAGGCGGCGCCCCTCTACCGGTGCTCAGCGATACCGGCCGAACAACGGC AGGTGATGGTGGTGAAGGCGGCGACGGCGACAGTACGGCCATATGTCGTT TGTGCAGTCTTGCGAGGAGTCACTTTCGACCAGAAGCGCTACAAGAGCTT CATCGATCTTCAGGACAAGGTATCAATGCTGTTATGTGCGAAAAATTCGC TGCAAATCGCTGTTTAATTTCGTCTGATGGTGCGGGTGAGATTGGATGTT TTGGGATCCCGACACACCAATGCGGCCAAGCCTGCCATGAGTGTTTTCCT AAGGCAGTCAGGTGGCATTACGAAGTTCTTCACGTAGCCCAGTTTTCTTC AAACTTGCTCTTTCCGACTCTTTCCTCTCTTCATTCATTTTGCCAGCTGT TATCGAAATTCATTTACCTCCTCCCACAATCGTCACGCGGCAGCTGCACC AAAACATCTGCCGAAGACGGACGCTTGTGGCAGTGGGTACGCACGACCTC GCCACGGTCCGCGGCCCGTTCGTGTACGACGCGCAGCCGCCAGATGCCAT CGAATTCGTGCCGCTGACACCGGCGGACTGCGGCCCCTTCAAAGCCCGTG CCCTGCTGGACTTCTACAACACCGACCTGACGGCGAGGCACCTGAAGCCT TACACATCCATCATTTACGACAGCGAGGTGAGCGCGGCGCGATGCATTGA AGGACAAGGAGAAGCAGCTGGCGCTGCAGGTGGACGGTCCCCGCTCCCGT TCCTCGCTGCCGTTAAGGTCTAAAAGATTGCGTGGTTAGACATTTAACAC GCTTTTCTACTCGCGCGTGGACGGAATAGAGCGGAAAGAATCTAGAAGCG TTGTTACCCAGGAAGCTCCTTTCACACTGGCAGCGGGATAGCAGTCTTGG CACACGAATTCCCACTTCGTTGCGCTAAGGCCTTAAACAGAGCTTCTTGC TTCAAAATCCCTTAGGCTGTCTCCCCTCCATGCTTTCGAGGAGTGATAGG TGGAGCGATTTTTCCCCGGGCGCAAATGCAGCTGAGCTGATACCCGTCCT CCCTCCTCTCCCCCTTCCCGCCGCCGCGACGGACTATGAACGCGACAACG CGTGCAGCTGTACCCTTGCATCTTTGACGCGGACGGCGTGCTGCTGTCGC TGCCGCCCGTCATCAACGGCTACCACAGCCGCATCCGCATGGAGACACGG GATGTCTTCATCGAGTGCACCGCCACGGACAAGACCAAGGCCAGCATCGT CCTCGACACTGTCGTTACTATGTTCTCAGAGGTGCGCCTGTCGTCGATAA GAGGAGTTTTGTGCTGGGAGGAAGTAGTGTCTCTTGAAAGAACACAGTTA CGCCCGGCCCGCGAAGATCATTATGTCCTTTCGTACGGACCTGAACATGG TCGCTTACCTAGTGGCAGGGAGTGAAACAATCGTTATTGTGGAAGACGGG TGATTTTGACTGCTGCAAAAGGTGATTTCCCCTGTGGCCTCCTCTCGCAT TTCCATTTTACAGTACTGCACGGAGCCCTTCACGGCCGAGCCCGTGGACG TACGTTATGAGGCGGATGGCCACGTCGAGACGACGCCGCTGCTGTCGACG CGGACGCAGAAGGCGTCTCTTGACACGATCCGCTCCTACATCGGCGTAAC TGCCGAAGAGCTGCCATCAGACGAGATCTGCGACCTCTGCGTGCGGATGC AGCTGGGGCCCGCCGCGCTGACCGGCGGCACCGACGGTGACGGCGGCGGC GGCGGCGGCGAAATCGGGGCTCCGGCATCGGTGGCGGTGACGGTGCCGCC AACGCGGAGCGACATTCTACACGAGGTGGATGTGATTGAGGACGTCGCCA TCGCTTTCGGCTTCAACAACATCCCCATCCGGATGCCAGCGACGCAGACG GTCGGGGGCGGCCTTCGCATCAACGGCTTTTGCGATTTGCTCAGGTAAAG TTTGTTCGCTCGCTTTTTTCCCGATTTTGCAGCTGGCTGAGTTCCATTTG GAATTTCATTTTTGCGCATTGCCGCCCACTCCTCCGTTCATATCATACCC TTCGTATTTCGCTAGCGTAATCATTTGCCGTTCCATTCGAAAGAAAGCTG GTTCGTTCGTTTGCGGGCAACAGCTGGGGTGGCGCCGTTGGAGGAAGTTC CTTACTTCCTGCGCCTAGCAACACCGCACTTACTTTTCGCTCCAAACCAA GCCGTTCGTTTGCATCGGTAGTGAATGGTTCGTTACAACCCTCTCTCATT AGACAGCTCCTCCGTCTGTTGCGGCCTGCATGACTTTTCTCCTAACGCGC CCCATCGGCCCCCGCACCGCGCGCTGCAGAGATGAGGTGTCACGGGCTGG GTACTGCGAGATGCTGACGCACGGCCTATGCTCGCGGGCGGAGAACTTTG CGATGCTGCGGCGGTCGCCGGCGCCATGCGTGTCGCTCATTAACCCCGCT GTCATTGAGTACGAGGTGGTGCGGACGGCGCTGTTGCCGGGGGCCCTCAA GACGATGCAGTACAATAAGGGCATCGCCGTCAAGGCACGTTTTGGTCCGC TTGGGGCATGGGGGTGCAAAGAGGAGGTGCAGGGGTAGGTCGAACGCCGT TTTGCCGCCTTCGATGCGGCTGCAATGGCAGGCACGTGTTATACGTCTCA CGAGAGCTTCTTGCGCCTCGCCGCCTTTGGTTTAATAGACACATGTGTGG GTGCCTCCACCGCTGCCGCTGTCGCCGCAATTGTGCTTGTTCTACAGGAT GGCATCAAGCTGTTTGAGACTTCGGACGTCGTCTTGCCGGACGACACAAC CGACACGGGGGCGCGCAACTGTCGACGGCTGGTGGCGACGTACATGGGCA TGGCGGCGGGCTTCGAGGTCATCCACGGCCTCGTCGACCGCATCATGACC GTTTCGCAGGTATGCGTTCAGGCCTAAGTTACTCCCCTTCCCCTTTCTAT AGTAGCTTACGACTGTCAAGTGACTCTTTGGTTTCCCGACCGTGTGACAC ACGCGCACCCAAAGCCCGCAGCGTTCAACTTGTTGCCTCAGCAAGTTGCT CTCCCTACGCTGGAGGCACGTACGCTTTCCTCTTTATCACGTTTCTTTGG ACTAAACATTTATTTTGGCTTTTCCCAAAACTTTACCAAAATCCCGTGCG GCCTGGCCCGGTCTTCGCCCCTGCGCAGGTGCCGCCGACAGAGGACTACG CAGGCGCCTCACTGCGCGAGGGGGACGTCCGCTTCGGCGGGCCGTGGCGG GAGGGTTTCTCGTACTGGATCCGCCCGGCCGAGGATCCGGCATACTTTCC AGGCCGCTGCGCCGCCGTCATGCTGCGCGTGGACGATGAGGAGACGGTGC TGGGCACTTTTGGGGTGCTGCATCCGGAGGTGCTGGCGGCGTATGAGCTT GGCTACCCATGCTCCGCCGTCGAGATCGACCTCGAGCCCCTCGTATGAGG TGACTGGGGAGGAGTGGGCGGGTTGACAGCCTGGCAGGGCGGCGGAGTGA GGTCAGTTAGGTTTGGCGGGGATTTGACGGGTAGTGAAGGAAGAGACTGC CGGCTGCTGCCATAGCGCGAAGGGTCTTCGGAAGTTGGCCGTTCGAGCTA GAAGCTGTCCGACTGGTGGCCTCGCGTGGACTGCGCGCCAGATTTGGCAG TTGGCGAGGCTTCGGCGGTCAGATATTAATGCGAACTGGCATTCCCTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1036:1761..7309+

>mRNA_P-wetherbeei_contig1036.3.2 ID=mRNA_P-wetherbeei_contig1036.3.2|Name=mRNA_P-wetherbeei_contig1036.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1926bp|location=Sequence derived from alignment at P-wetherbeei_contig1036:1761..7309+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGACTGTGAACATCGTCCGCGAGGACCTCTTTGAGGCCCTCGGAAA
ACGATACACCGAAGGGGAGTTCGATGCGCTCTGCTTCGACTTCGGCATTG
AACTGGACGAGGTGACGAGCGAAGCAGAGGAGCTAGCAAAATCCCAGGGG
GCCGCAGCCGTTGCCGAAGTGGGGAGCGCCGCCGCCGACGATGTCATCTA
TAAGATTGACATTCCGGCAAATCGCTACGACCTCCTCTGCATTGAGGGCC
TGACGCGGGCGCTGAACGTTTTCCTTGGAAGACAGGCGGCGCCCCTCTAC
CGGTGCTCAGCGATACCGGCCGAACAACGGCAGGTGATGGTGGTGAAGGC
GGCGACGGCGACAGTACGGCCATATGTCGTTTGTGCAGTCTTGCGAGGAG
TCACTTTCGACCAGAAGCGCTACAAGAGCTTCATCGATCTTCAGGACAAG
CTGCACCAAAACATCTGCCGAAGACGGACGCTTGTGGCAGTGGGTACGCA
CGACCTCGCCACGGTCCGCGGCCCGTTCGTGTACGACGCGCAGCCGCCAG
ATGCCATCGAATTCGTGCCGCTGACACCGGCGGACTGCGGCCCCTTCAAA
GCCCGTGCCCTGCTGGACTTCTACAACACCGACCTGACGGCGAGGCACCT
GAAGCCTTACACATCCATCATTTACGACAGCGAGCTGTACCCTTGCATCT
TTGACGCGGACGGCGTGCTGCTGTCGCTGCCGCCCGTCATCAACGGCTAC
CACAGCCGCATCCGCATGGAGACACGGGATGTCTTCATCGAGTGCACCGC
CACGGACAAGACCAAGGCCAGCATCGTCCTCGACACTGTCGTTACTATGT
TCTCAGAGTACTGCACGGAGCCCTTCACGGCCGAGCCCGTGGACGTACGT
TATGAGGCGGATGGCCACGTCGAGACGACGCCGCTGCTGTCGACGCGGAC
GCAGAAGGCGTCTCTTGACACGATCCGCTCCTACATCGGCGTAACTGCCG
AAGAGCTGCCATCAGACGAGATCTGCGACCTCTGCGTGCGGATGCAGCTG
GGGCCCGCCGCGCTGACCGGCGGCACCGACGGTGACGGCGGCGGCGGCGG
CGGCGAAATCGGGGCTCCGGCATCGGTGGCGGTGACGGTGCCGCCAACGC
GGAGCGACATTCTACACGAGGTGGATGTGATTGAGGACGTCGCCATCGCT
TTCGGCTTCAACAACATCCCCATCCGGATGCCAGCGACGCAGACGGTCGG
GGGCGGCCTTCGCATCAACGGCTTTTGCGATTTGCTCAGAGATGAGGTGT
CACGGGCTGGGTACTGCGAGATGCTGACGCACGGCCTATGCTCGCGGGCG
GAGAACTTTGCGATGCTGCGGCGGTCGCCGGCGCCATGCGTGTCGCTCAT
TAACCCCGCTGTCATTGAGTACGAGGTGGTGCGGACGGCGCTGTTGCCGG
GGGCCCTCAAGACGATGCAGTACAATAAGGGCATCGCCGTCAAGGATGGC
ATCAAGCTGTTTGAGACTTCGGACGTCGTCTTGCCGGACGACACAACCGA
CACGGGGGCGCGCAACTGTCGACGGCTGGTGGCGACGTACATGGGCATGG
CGGCGGGCTTCGAGGTCATCCACGGCCTCGTCGACCGCATCATGACCGTT
TCGCAGGTGCCGCCGACAGAGGACTACGCAGGCGCCTCACTGCGCGAGGG
GGACGTCCGCTTCGGCGGGCCGTGGCGGGAGGGTTTCTCGTACTGGATCC
GCCCGGCCGAGGATCCGGCATACTTTCCAGGCCGCTGCGCCGCCGTCATG
CTGCGCGTGGACGATGAGGAGACGGTGCTGGGCACTTTTGGGGTGCTGCA
TCCGGAGGTGCTGGCGGCGTATGAGCTTGGCTACCCATGCTCCGCCGTCG
AGATCGACCTCGAGCCCCTCGTATGA
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