mRNA_P-wetherbeei_contig14236.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: A0A1Z9UGU5_9GAMM (Bac_luciferase domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UGU5_9GAMM) HSP 1 Score: 274 bits (701), Expect = 3.620e-90 Identity = 130/185 (70.27%), Postives = 151/185 (81.62%), Query Frame = 1
Query: 1 SDLRGHEYKQPLATMRAYLDRMDQTWTALGGAAGEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIICEQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPCWQVLEALA 555
SD+RGHEYK+P+ATMR YLD MDQ W ALGGA EK+V++AALGP M+ LA+ERTLG FPYNITPEQ LS+ AM +GAI+CEQKVCL + AR AARAAL PY+ LPNY+KNWFRLG DESDL++GGSDRLMDAMV+WGS+ +I KL YFD GA QVV+QPIR DG+PGP W LEALA
Sbjct: 104 SDMRGHEYKKPVATMRKYLDDMDQAWEALGGAPAEKQVMLAALGPNMSALASERTLGAFPYNITPEQAQLSRKAMGDRGAIVCEQKVCLSTNAEEARAAARAALGPYLPLPNYYKNWFRLGXDESDLENGGSDRLMDAMVIWGSSEEIDEKLNQYFDNGADQVVIQPIRPDGQPGPDWAALEALA 288
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: A0A523PD98_9PROT (TIGR03620 family F420-dependent LLM class oxidoreductase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PD98_9PROT) HSP 1 Score: 272 bits (696), Expect = 2.220e-89 Identity = 130/188 (69.15%), Postives = 147/188 (78.19%), Query Frame = 1
Query: 1 SDLRGHEYKQPLATMRAYLDRMDQTWTALGGAAGEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIICEQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPCWQVLEALAPGA 564
+D+RGHEYK+P+ TMRAYLD MDQ W LGGA EK+VV+AALGP M+KLA ERTLG PYNITP Q +S++ M A+ICEQKVCLC DP AR ARAAL YM LPNYF NWFRLGF+E DL DGGSDRLMDAMV+WG A +IK KL+ YFD GA QVVVQPIRADG+PGP W LEA AP +
Sbjct: 104 TDMRGHEYKKPVTTMRAYLDAMDQAWEGLGGAPDEKQVVLAALGPNMSKLAGERTLGAIPYNITPAQAGISRSNMGPDAAVICEQKVCLCTDPDKARAVARAALELYMPLPNYFNNWFRLGFNEEDLADGGSDRLMDAMVLWGEADEIKVKLQQYFDAGADQVVVQPIRADGQPGPDWAALEAFAPSS 291
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: A0A3D5DC64_9GAMM (LLM class F420-dependent oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DC64_9GAMM) HSP 1 Score: 267 bits (682), Expect = 2.870e-87 Identity = 125/186 (67.20%), Postives = 149/186 (80.11%), Query Frame = 1
Query: 1 SDLRGHEYKQPLATMRAYLDRMDQTWTALGGAAGEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIICEQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPCWQVLEALAP 558
SD+RGHEYK PL+ MR YLD MD+ W A+GG +K+VV+AALGP+M++LAAERTLG FPYNITPEQ D+S++ M A+ICEQKV LC DP AR+ ARA+L YM +PNYFKNWFRLGF+E DLKDGGSDRLMDAMV WG A +IK KL+ YFD GA QVV+QP+R DG+ GP W+ LEA AP
Sbjct: 104 SDMRGHEYKHPLSAMRDYLDGMDKAWAAMGGVPPQKQVVLAALGPKMSQLAAERTLGAFPYNITPEQADISRSNMGPDAAVICEQKVLLCTDPVKAREIARASLGFYMPMPNYFKNWFRLGFNEDDLKDGGSDRLMDAMVFWGEADEIKEKLQQYFDGGADQVVIQPLRVDGQAGPDWEALEAFAP 289
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: A0A836TRF4_9PROT (TIGR03620 family F420-dependent LLM class oxidoreductase n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836TRF4_9PROT) HSP 1 Score: 247 bits (630), Expect = 2.360e-79 Identity = 116/189 (61.38%), Postives = 145/189 (76.72%), Query Frame = 1
Query: 1 SDLRGHEY-KQPLATMRAYLDRMDQTWTALGGAAGEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIICEQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPCWQVLEALAPGA 564
+D+RGHEY ++P++TMRAYLD MDQ W A GGA K+V++AALGP M KL+ ERTLG PYN+TPE +++ + + EQK+CL + AR AAR A+ PY+ LPNYFKNWFRLGFDESDL++GGSDRLMDAMV+WG+ I+AKL+A+FD GA QVV+QPIR DG+PGP W LEALAP A
Sbjct: 104 ADVRGHEYSRKPVSTMRAYLDAMDQAWEAFGGAPAVKQVMLAALGPNMLKLSGERTLGALPYNVTPEHAGIARQQVGADNFVCTEQKICLTTNGDEARAAARDAMTPYLPLPNYFKNWFRLGFDESDLENGGSDRLMDAMVIWGNTDDIQAKLQAHFDSGAGQVVIQPIRPDGQPGPDWNALEALAPEA 292
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: A0A836TTT8_9PROT (TIGR03620 family F420-dependent LLM class oxidoreductase n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836TTT8_9PROT) HSP 1 Score: 183 bits (464), Expect = 3.870e-54 Identity = 93/184 (50.54%), Postives = 116/184 (63.04%), Query Frame = 1
Query: 13 GHEYKQPLATMRAYLDRMDQTWTALGGAA-GEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIICEQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPCWQVLEALAPG 561
GH +++PL+TMR YLD MD W LGG GEKR+++AALGP M KLAAE TLG PYN TPE ++ + ++ Q VCL +P AR AR L+ Y+ P Y W +GF+E D +GGSDRLMDAMV WG+ I A+LKA+ D GA V +Q +R DG P W LEALAPG
Sbjct: 119 GHLFEKPLSTMRKYLDDMDAAWEVLGGPFNGEKRLMLAALGPGMQKLAAESTLGPIPYNNTPELTARARERIGADSTLVAVQNVCLTTNPAEARATARRTLSFYLEFPRYHDIWSSVGFNEEDWSNGGSDRLMDAMVAWGTEDDILARLKAHLDAGATHVGIQSLRPDGAGVPDWNALEALAPG 302
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: A0A1Z8WRK9_9GAMM (Bac_luciferase domain-containing protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WRK9_9GAMM) HSP 1 Score: 181 bits (459), Expect = 1.440e-53 Identity = 88/181 (48.62%), Postives = 120/181 (66.30%), Query Frame = 1
Query: 10 RGHEYKQPLATMRAYLDRMDQTWTALGGAAGEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIICEQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPCWQVLEAL 552
RGH Y P+ M Y+ M T+ +L E+ + +AALGP+M+ LA+ G FPYNIT QV+LS+ +M GAI CEQK+CL D AR+ AR L Y+SLPNY NW RLGFD SD K+GGS+R +D+MV+ G +I+ KL YF+KGA ++V+QP++A+G+PGP LE +
Sbjct: 106 RGHTYGSPVKEMSDYIKNMKLTFQSLEYK-DERNIFIAALGPKMSALASAEVTGVFPYNITSAQVELSRKSMGSTGAICCEQKICLTSDKNKAREIARTNLEFYLSLPNYQNNWLRLGFDSSDFKNGGSERFLDSMVISGDRIEIRDKLNEYFEKGADELVIQPLKANGQPGPDLDALEQI 285
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: A0A6A7KLR1_9PROT (TIGR03620 family F420-dependent LLM class oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KLR1_9PROT) HSP 1 Score: 180 bits (457), Expect = 1.060e-52 Identity = 93/185 (50.27%), Postives = 118/185 (63.78%), Query Frame = 1
Query: 10 RGHEYKQPLATMRAYLDRMDQTWTALGGAAGEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIICEQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPCWQVLEALAPGA 564
RGH Y +PL TMRAYLD M A+ A + +V+AALGP+M L+ ++T G PYN+TPE +KA + + EQ VCL D TAR+ A LA YM +PNY NW RLGF E ++ GSDR +DAMV WGSAA I+A++KA+FD GA V +QP+ DG P W+ LEALAP A
Sbjct: 153 RGHRYGKPLGTMRAYLDAMAAADVAVK--APGRNLVLAALGPKMLALSRDKTDGALPYNVTPEHTVEAKAILGRDRWLCVEQMVCLTGDAGTARQVAGKTLARYMVMPNYRNNWLRLGFGEDEMTGRGSDRFLDAMVAWGSAATIRARVKAHFDAGATHVCIQPLNPDGSAAPDWKALEALAPAA 335
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: A0A2D6BU44_9DELT (LLM class F420-dependent oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BU44_9DELT) HSP 1 Score: 169 bits (428), Expect = 7.620e-49 Identity = 90/187 (48.13%), Postives = 120/187 (64.17%), Query Frame = 1
Query: 7 LRGHEYKQPLATMRAYLDRMDQTWTALGGAAGEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIICEQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPC-WQVLEALAPGA 564
+RG EY +P+A MRAYL+ M+ + + A R V+AALGP+M LAAE+ G PY TPE +++ + + EQKVCL D AR+AAR ALA Y LPNY NW RLGFD+ D+ GGSD L+DA+V WG I+ ++KA+ D GA+ V +QP++A G PG W++LEALAP A
Sbjct: 106 VRGLEYGKPVAAMRAYLEVMEASPYSSVPPAATPRTVIAALGPKMLALAAEKADGAHPYWTTPEHTAMAREILGPDKMLCVEQKVCLEVDRQKAREAARQALAMYAGLPNYANNWKRLGFDDDDIAHGGSDALIDALVAWGDEEAIRDRVKAHRDAGASHVCIQPLKAGGAPGEVDWKLLEALAPRA 292
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: A0A523IED3_9DELT (TIGR03620 family F420-dependent LLM class oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523IED3_9DELT) HSP 1 Score: 169 bits (428), Expect = 9.200e-49 Identity = 91/189 (48.15%), Postives = 121/189 (64.02%), Query Frame = 1
Query: 1 SDLRGHEYKQPLATMRAYLDRMDQTWTALGGAAGEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIIC-EQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPCWQVLEALAPGA 564
S LRGH Y +P++TMR+YL+ M++ + E +V+AAL M +LA ER G PYN+TPE ++A + GKG ++C EQ V L D T AR AR L Y+SLPNY W GFD++D DGGSDRL+DA+V WG I A+++A+ D GA V +QP RADG+PG ++LEALAP A
Sbjct: 111 SGLRGHRYGKPVSTMRSYLESMEKAVYQGPESEQEAPIVLAALRENMLRLAGERASGAHPYNVTPEHTARARAIL-GKGPLLCPEQMVLLETDATKARAIARQNLRVYLSLPNYQNGWKWQGFDDADFADGGSDRLIDAIVAWGDEEAIAARVQAHHDAGADHVCIQPFRADGQPGADLRILEALAPNA 298
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Match: UPI00117D6A3A (TIGR03620 family F420-dependent LLM class oxidoreductase n=1 Tax=Rhodoligotrophos appendicifer TaxID=987056 RepID=UPI00117D6A3A) HSP 1 Score: 168 bits (426), Expect = 1.480e-48 Identity = 92/185 (49.73%), Postives = 117/185 (63.24%), Query Frame = 1
Query: 7 LRGHEYKQPLATMRAYLDRM--DQTWTALGGAAGEKRVVVAALGPQMAKLAAERTLGTFPYNITPEQVDLSKAAMAGKGAIICEQKVCLCEDPTTARKAARAALAPYMSLPNYFKNWFRLGFDESDLKDGGSDRLMDAMVVWGSAAQIKAKLKAYFDKGAAQVVVQPIRADGKPGPCWQVLEALA 555
+RGH Y++P+A MR YLD + D+ TA E +V+AALGP M KLA ER+ G PYN+TPE ++A + + EQKVCL D T AR AR LA YM+LPNY NW R+GF E+DL DGGSDR +DAMV+WG AQI L+A+ + GA V +QP+ ADG + L ALA
Sbjct: 108 VRGHVYEKPVAAMRRYLDGVYDDRRDTA------EWPLVIAALGPMMLKLAGERSAGAVPYNVTPEHTRTARAILGPGKLLAVEQKVCLETDATVARGLARHELARYMTLPNYRNNWLRIGFTEADLADGGSDRFLDAMVLWGEPAQIAQGLRAHLEAGADHVCIQPVHADGDVEGRDRTLTALA 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14236.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14236.1.1 >prot_P-wetherbeei_contig14236.1.1 ID=prot_P-wetherbeei_contig14236.1.1|Name=mRNA_P-wetherbeei_contig14236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=189bp SDLRGHEYKQPLATMRAYLDRMDQTWTALGGAAGEKRVVVAALGPQMAKLback to top mRNA from alignment at P-wetherbeei_contig14236:2..568+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14236.1.1 ID=mRNA_P-wetherbeei_contig14236.1.1|Name=mRNA_P-wetherbeei_contig14236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=567bp|location=Sequence derived from alignment at P-wetherbeei_contig14236:2..568+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14236:2..568+ >mRNA_P-wetherbeei_contig14236.1.1 ID=mRNA_P-wetherbeei_contig14236.1.1|Name=mRNA_P-wetherbeei_contig14236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=567bp|location=Sequence derived from alignment at P-wetherbeei_contig14236:2..568+ (Phaeothamnion wetherbeei SAG_119_79)back to top |