mRNA_P-wetherbeei_contig1033.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1033.2.1
Unique NamemRNA_P-wetherbeei_contig1033.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: A0A7R9FRH0_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9FRH0_9CRUS)

HSP 1 Score: 97.1 bits (240), Expect = 3.870e-21
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 1
Query:    1 SGEWRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLAT 345
            +G W++  GGA++ +     +HS +IAA+D DGTI  T+SG  F  + +DW IL+     I GKL  L + GYKLA L+NQLGV KG   R ++ G+V AVV  +G+P+   ++T
Sbjct:  123 TGSWKDEEGGALMVYTPPNIQHSEKIAAYDIDGTIIATKSGRVFATDRNDWRILY---AEIPGKLKELASRGYKLAFLTNQLGVAKGKVGREELRGKVEAVVGRLGVPVQALVST 234          
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: UPI00044320F6 (bifunctional polynucleotide phosphatase/kinase n=2 Tax=Didelphinae TaxID=126287 RepID=UPI00044320F6)

HSP 1 Score: 87.8 bits (216), Expect = 6.190e-18
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   10 WRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLAT 345
            W+EL  G +L F     +   ++A FD DGT+  TRSG  FP    DW IL+ G   I  +L  L A+GYKL I +NQLG+G+G     D + +V AV+AA+G+P  V +AT
Sbjct:  132 WQEL--GHLLRFTAPGVQPREKVAGFDLDGTLITTRSGKVFPTGPEDWRILFPG---IPKRLRELEASGYKLVIFTNQLGIGRGRLRPGDFQTKVEAVLAALGVPFQVLVAT 238          
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: F7D7W2_MONDO (FHA_2 domain-containing protein n=2 Tax=Monodelphis domestica TaxID=13616 RepID=F7D7W2_MONDO)

HSP 1 Score: 87.8 bits (216), Expect = 8.080e-18
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   10 WRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLAT 345
            W+EL  G +L F     +   ++A FD DGT+  TRSG  FP    DW IL+ G   I  +L  L A+GYKL I +NQLG+G+G     D + +V AV+AA+G+P  V +AT
Sbjct:  132 WQEL--GHLLRFTAPGVQPREKVAGFDLDGTLITTRSGKVFPTGPEDWRILFPG---IPKRLRELEASGYKLVIFTNQLGIGRGRLRPGDFQTKVEAVLAALGVPFQVLVAT 238          
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: A0A5F8GRL3_MONDO (FHA_2 domain-containing protein n=2 Tax=Monodelphis domestica TaxID=13616 RepID=A0A5F8GRL3_MONDO)

HSP 1 Score: 87.8 bits (216), Expect = 8.110e-18
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   10 WRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLAT 345
            W+EL  G +L F     +   ++A FD DGT+  TRSG  FP    DW IL+ G   I  +L  L A+GYKL I +NQLG+G+G     D + +V AV+AA+G+P  V +AT
Sbjct:  135 WQEL--GHLLRFTAPGVQPREKVAGFDLDGTLITTRSGKVFPTGPEDWRILFPG---IPKRLRELEASGYKLVIFTNQLGIGRGRLRPGDFQTKVEAVLAALGVPFQVLVAT 241          
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: B4K8T9_DROMO (FHA_2 domain-containing protein n=5 Tax=repleta group TaxID=32321 RepID=B4K8T9_DROMO)

HSP 1 Score: 87.0 bits (214), Expect = 1.440e-17
Identity = 44/112 (39.29%), Postives = 68/112 (60.71%), Query Frame = 1
Query:    7 EWRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLA 342
            +W  +A G +L + +A    S++IAA+D DGTI  T+SG  FPKNT DW I++     +  KL  LH  GYK+   +NQ G+ +G  S  D + +V  +V  +G+P+ V++A
Sbjct:  140 KWDSVANGKMLIYNSAGLAPSSKIAAYDMDGTIIKTKSGNVFPKNTDDWQIIY---PEVPQKLQSLHKDGYKICFFTNQGGIARGKVSLEDFKTKVKNIVKKLGVPVQVFIA 248          
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: D7FLS6_ECTSI (Polynucleotide kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS6_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.530e-17
Identity = 49/113 (43.36%), Postives = 67/113 (59.29%), Query Frame = 1
Query:    4 GEWRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLA 342
            G W EL  G+VL +    +R ST I AFD DGT+  T+SG +F     DW  LW G +     L   H  GYK+AI+SNQ+GVG G      ++ +V +VV A+G+P++ YLA
Sbjct:  260 GRWEELMEGSVLRWVPDRSRVSTHIVAFDMDGTLIKTKSGKRFGDAADDWQ-LWNGKIPT--VLRKWHDRGYKVAIISNQMGVGTGKVDPRMLKAKVRSVVRALGIPVEAYLA 369          
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: A0A1B6H0S1_9HEMI (FHA_2 domain-containing protein n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6H0S1_9HEMI)

HSP 1 Score: 84.7 bits (208), Expect = 9.350e-17
Identity = 39/112 (34.82%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   10 WRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLAT 345
            W ++  G +  F +A  R ST+IAA+D DGT+  T+SG  FPK+  DW + +G   +++ KL+   + GYK+ IL+NQ G+ +G  + ++ + ++  +V  + +P+ V++AT
Sbjct:  146 WEKIEDGKLYVFTSAGVRSSTKIAAYDLDGTLILTKSGRVFPKDNDDWKLAFG---SVKSKLSKFISEGYKIVILTNQAGISRGKTNVNEFKTKIENIVRDLNVPVQVFIAT 254          
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: A0A1B6MMI3_9HEMI (FHA_2 domain-containing protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6MMI3_9HEMI)

HSP 1 Score: 82.8 bits (203), Expect = 1.170e-16
Identity = 39/115 (33.91%), Postives = 70/115 (60.87%), Query Frame = 1
Query:   10 WRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLATCVS 354
            W  +  G +  F +A  R S++IAA+D DGT+  T+SG  FPK+  DW + +G   +++ KL+     GYK+ IL+NQ G+ +G  + ++ + ++  +V  + +P+ V++AT  S
Sbjct:  146 WERIEDGKLYIFTSAGVRSSSKIAAYDLDGTLILTKSGRVFPKDNDDWKLAFG---SVKPKLSKFAGDGYKIVILTNQAGISRGKTNINEFKTKIENIVRDLNVPVQVFIATTTS 257          
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: A0A026X339_OOCBI (Bifunctional polynucleotide phosphatase/kinase n=3 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026X339_OOCBI)

HSP 1 Score: 84.0 bits (206), Expect = 1.790e-16
Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = 1
Query:    1 SGEWRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLA 342
            S +W     G ++ +  ++ +H ++IAA+D DGT+   +SG  FPK+ SDW +L+     I GKL   HA GYK+ I +NQ G+  G     D + ++  +V  IG+P+ V++A
Sbjct:  174 SAKWESFDSGKLMIYTASSVQHRSKIAAYDMDGTLIKPKSGLVFPKDCSDWQLLY---PDIPGKLKQFHANGYKIVIFTNQAGLSTGKVKIKDFKLKIEKIVQKIGVPIQVFIA 284          
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Match: D6WPR6_TRICA (Bifunctional polynucleotide phosphatase/kinase-like Protein n=2 Tax=Tribolium TaxID=7069 RepID=D6WPR6_TRICA)

HSP 1 Score: 83.6 bits (205), Expect = 2.360e-16
Identity = 44/115 (38.26%), Postives = 68/115 (59.13%), Query Frame = 1
Query:    1 SGEWRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSDWSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGAVVAAIGLPMDVYLAT 345
            SG+W E+ G  +L F T      + IAAFD DGT+  T+SGA+FPK+ +DW +      +I  KL  LH  G+K+ IL+NQ G+          +G++ A++A + +P  V++AT
Sbjct:  133 SGKWEEIDGRDLLIFTTDNCEPQSTIAAFDLDGTLIKTKSGARFPKDPNDWVL---NINSIPQKLQKLHDKGHKIVILTNQSGLSNDFSKVKGFKGKIEAIIAKLSVPAQVFIAT 244          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1033.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9FRH0_9CRUS3.870e-2143.48Hypothetical protein n=1 Tax=Darwinula stevensoni ... [more]
UPI00044320F66.190e-1843.75bifunctional polynucleotide phosphatase/kinase n=2... [more]
F7D7W2_MONDO8.080e-1843.75FHA_2 domain-containing protein n=2 Tax=Monodelphi... [more]
A0A5F8GRL3_MONDO8.110e-1843.75FHA_2 domain-containing protein n=2 Tax=Monodelphi... [more]
B4K8T9_DROMO1.440e-1739.29FHA_2 domain-containing protein n=5 Tax=repleta gr... [more]
D7FLS6_ECTSI1.530e-1743.36Polynucleotide kinase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A1B6H0S1_9HEMI9.350e-1734.82FHA_2 domain-containing protein n=3 Tax=Proconiini... [more]
A0A1B6MMI3_9HEMI1.170e-1633.91FHA_2 domain-containing protein n=1 Tax=Graphoceph... [more]
A0A026X339_OOCBI1.790e-1635.96Bifunctional polynucleotide phosphatase/kinase n=3... [more]
D6WPR6_TRICA2.360e-1638.26Bifunctional polynucleotide phosphatase/kinase-lik... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1033contigP-wetherbeei_contig1033:7235..7867 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FLS6
PFAMsAAA,AAA_33,DSPc,PNK3P
Model size357
Max annot lvl2759|Eukaryota
KEGG koko:K08073
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.52e-18
EggNOG OGsCOG0241@1|root,KOG2134@2759|Eukaryota
EC2.7.1.78,3.1.3.32
DescriptionDNA-3'-diphospho-5'-guanosine diphosphatase
Cds size357
COG categoryE
BRITEko00000,ko01000,ko01009,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185864.032901-CDS-P-wetherbeei_contig1033:7234..73501683185864.032901-CDS-P-wetherbeei_contig1033:7234..7350Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1033 7235..7350 +
1683185864.045647-CDS-P-wetherbeei_contig1033:7626..78671683185864.045647-CDS-P-wetherbeei_contig1033:7626..7867Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1033 7627..7867 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1033.2.1prot_P-wetherbeei_contig1033.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1033 7235..7867 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1033.2.1

>prot_P-wetherbeei_contig1033.2.1 ID=prot_P-wetherbeei_contig1033.2.1|Name=mRNA_P-wetherbeei_contig1033.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp
SGEWRELAGGAVLHFETAAARHSTRIAAFDFDGTIAGTRSGAQFPKNTSD
WSILWGGAVAIRGKLAPLHAAGYKLAILSNQLGVGKGHESRSDVEGRVGA
VVAAIGLPMDVYLATCVS*
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mRNA from alignment at P-wetherbeei_contig1033:7235..7867+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1033.2.1 ID=mRNA_P-wetherbeei_contig1033.2.1|Name=mRNA_P-wetherbeei_contig1033.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig1033:7235..7867+ (Phaeothamnion wetherbeei SAG_119_79)
AGCGGGGAGTGGCGGGAGCTGGCGGGCGGGGCGGTGCTGCACTTCGAGAC GGCGGCGGCACGGCACTCGACGCGCATCGCCGCCTTCGACTTCGATGGAA CGATTGCCGGCACAAGGTGGGTGGGTTGCCGAGGGCTGTTTCGGCGCTTT CTTTTCGCCTTTTATCTTTCTTTCAGTGTTCCTTTTCAATAATAGGTCTT TGATGGATGTTGCCGTTCGCTCATAAGTACTCCTACGTTGTCAAGGAAAG GTGGGGGAGACGTTGGTGTACAAACAGACGGAACATGCACCCTTTAAAAC TTTTCACATTTTGCCTTACATCACCGCTCCCGTCGCTGCCGCCATCGCGC TGCCGCCGCTGCCATTACCGCCGTTACCAACCCGGAAAAAAGGTCGGGCG CCCAGTTCCCGAAGAACACGAGCGACTGGTCCATCCTGTGGGGCGGTGCG GTAGCCATCCGCGGCAAGCTGGCGCCGCTGCACGCTGCCGGCTACAAGCT GGCCATCTTGTCGAACCAGCTCGGGGTGGGCAAAGGTCATGAGAGCCGGT CGGACGTGGAGGGCCGTGTCGGGGCCGTTGTGGCCGCCATCGGACTCCCC ATGGACGTCTACCTGGCCACCTGCGTGAGTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1033:7235..7867+

>mRNA_P-wetherbeei_contig1033.2.1 ID=mRNA_P-wetherbeei_contig1033.2.1|Name=mRNA_P-wetherbeei_contig1033.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig1033:7235..7867+ (Phaeothamnion wetherbeei SAG_119_79)
AGCGGGGAGTGGCGGGAGCTGGCGGGCGGGGCGGTGCTGCACTTCGAGAC
GGCGGCGGCACGGCACTCGACGCGCATCGCCGCCTTCGACTTCGATGGAA
CGATTGCCGGCACAAGGTCGGGCGCCCAGTTCCCGAAGAACACGAGCGAC
TGGTCCATCCTGTGGGGCGGTGCGGTAGCCATCCGCGGCAAGCTGGCGCC
GCTGCACGCTGCCGGCTACAAGCTGGCCATCTTGTCGAACCAGCTCGGGG
TGGGCAAAGGTCATGAGAGCCGGTCGGACGTGGAGGGCCGTGTCGGGGCC
GTTGTGGCCGCCATCGGACTCCCCATGGACGTCTACCTGGCCACCTGCGT
GAGTTGA
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