mRNA_P-wetherbeei_contig13894.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: A0A7C4TUG6_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TUG6_9HYPH) HSP 1 Score: 150 bits (378), Expect = 1.250e-40 Identity = 88/238 (36.97%), Postives = 125/238 (52.52%), Query Frame = 1
Query: 10 LMVAGTIGAVMQATTPKPTTPLCETRYAGGVLFSLARSSGTPLQPEDIQARLGGLDWGITTNTKVVKEEAVPYSYALEITMKR---NSESNQDRGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGDGGTLPGFVSDAPTEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSMLHSWNNGQSGQLI-LDGSKVRMKPGQWTRIEQEVVLNAPGRNNGILRVWINRELMLERYDVAF 711
L V T G +Q + P C RY +LFS R G L D+QARLGG DWG+ N + V++ P LE+++ + S + GGMGF W+P QL A+A+CLSY W+P + GG+LPG + G T +A K F+ W ++ R + + GQ I +D + R++ G+W IEQE+VLN PG ++GILRV+I+ L LER +AF
Sbjct: 22 LFVVATAGLAVQHMLTTSSEPPCAERYTTAMLFSWQRPGGEALSRTDLQARLGGSDWGLLDNVRFVRDGDAPAPVVLEVSLSKPAARGASEESPGGMGFRWMPSQLEKASAACLSYGVWLPTDLNFAAGGSLPGLYGG---NRHGQPTSGSAA-----KGFATHLTWGEEARADVHVVTVDAPEGQSIGIDPTWFRLRTGRWVNIEQEIVLNHPGVHDGILRVFIDGVLKLERRRLAF 251
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: A0A2S5MAH2_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MAH2_HYPSQ) HSP 1 Score: 129 bits (323), Expect = 1.170e-32 Identity = 78/234 (33.33%), Postives = 119/234 (50.85%), Query Frame = 1
Query: 1 AGVLMVAGTIGAVMQATTPKPTTPLCETRYAGGVLFSLARSSGTPLQPEDIQARLGGLDWGITTNTKVVKEEAVPYSYALEITM-KRNSESNQDRGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGDGGTLPGFVSDAP-TEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSM-LHSWNNGQSGQLILDGSKVRMKPGQWTRIEQEVVLNAPGRNNGILRVWINRELMLE 693
AGV ++A G ++++ T C RY G+ F+L G PL ++QAR G +WG+ N KVV P +L++++ K +SE ++ + G+GF W + A+++CLSYS ++P FK G+ G LPG T G +D T F+ W Q G + + S G G + G W +++QEVV+N PGR NGILR+WI+ L +E
Sbjct: 11 AGVSVLALVAGYMVRSALVTEHTAQCSRRYPAGMQFALDAQDGAPLSTIELQARAGLREWGVLENAKVVLASDSPSGKSLDVSLAKISSEGSRIQNGLGFVWPVYDIGTASSACLSYSVYLPENFKFGESGHLPGLTGTGTVTSVDGETSDGT---------FTAHVGWGQHGEIGIDVRSPYTG--GSWFASKGQAEWPRGHWVKVDQEVVMNTPGRANGILRMWIDGSLRVE 233
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: A0A7C2QLB1_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QLB1_9HYPH) HSP 1 Score: 125 bits (314), Expect = 2.870e-31 Identity = 82/242 (33.88%), Postives = 125/242 (51.65%), Query Frame = 1
Query: 1 AGVLMVAGTIGAVMQATTPKPTTPLCETRYAGGVLFSLARSSGTPLQPEDIQARLGGLDWGITTNTKVVKEEAVPYSYALEITMKRNS--ESNQDRGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGD-GGTLPGFVSDAPTEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSMLHSWN-NGQSGQLILDGSK-VRMKPGQWTRIEQEVVLNAPGRNNGILRVWINRELMLERYDVAF 711
A VL+ +GAV ++ P C RY + +L R+ G + D+QA LGG D G+ N +V+ + P A+ + + + + E+ + GG+ F W PR + TA+CL+YS +P +F GGTLPG T G+ D+ F R WRQ GR + S G + + +GS+ + G+W R+EQEVVLN P + +GILR+WI+ L ++R DV+F
Sbjct: 14 AAVLITVAAVGAVARSLVFSPKAAPCSERYTHTTVMTLERA-GALMTAADLQAGLGGRDVGLLENMSIVRVKDAPAPVAIMVRLPKAAATENGEPHGGVSFPWQPRPVRGRTAACLAYSVLLPADFPFTRVGGTLPGI-----TGAEGDAGDDG---------FLARIVWRQAGRLGIASSARLAGSESRRVDEGSEGAELARGRWVRLEQEVVLNTPRKEDGILRLWIDGWLAIDRRDVSF 240
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: A0A1E4C4T8_9HYPH (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4C4T8_9HYPH) HSP 1 Score: 124 bits (312), Expect = 5.530e-31 Identity = 73/216 (33.80%), Postives = 109/216 (50.46%), Query Frame = 1
Query: 76 CETRYAGGVLFSLARSSGTPLQPEDIQARLGGLDWGITTNTKVVKEE-AVPYSYALEITMKRNSES-NQDRGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGDGGTLPGFVSDAPTEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSMLHSWNNGQSGQLILDGSK--VRMKPGQWTRIEQEVVLNAPGRNNGILRVWINRELMLERYDVAF 711
C RYA V +SL R G L D+QARLG DWG+ VVK + + A++++ + S + R G+GF W P+ A+C SY+F + +F GG LPG +G D + AP+ FS+R W + G+ LH+ G S L + + G+W ++QEVV+N PGRN+G++R+W++ L E AF
Sbjct: 39 CRARYANAVQWSLLRDDGQLLTASDLQARLGATDWGLIERVNVVKADYGTGNALAVDLSGSGAATSASPSRSGVGFEWAPQSAGPVAAACASYAFKLDRQFDFASGGRLPGLFGGP----AGADRN-------APEAFSMRVAWDEYGKLG-LHTQLPGVSTSRALSNEREGTELPRGRWVMVDQEVVVNTPGRNDGVVRIWVDGRLRFESQKAAF 242
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: UPI000930E595 (hypothetical protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI000930E595) HSP 1 Score: 119 bits (299), Expect = 4.150e-29 Identity = 80/228 (35.09%), Postives = 113/228 (49.56%), Query Frame = 1
Query: 22 GTIGAVMQATTPKPTTPLCETRYAGGVLFSLARSSGTPLQPEDIQARLGGLDWGITTNTKVVKEEAVPYSYALEITMKR-NSESNQD---RGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGDGGTLPGFVSDAPTEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSMLHSWNNGQSGQLILDGSKVRMKPGQWTRIEQEVVLNAPGRNNGILRVWINRELMLE 693
G IG + A K C RY FSL S G PL +QAR G D G+ N VV+ P LE+ +++ + ++QD G+ F W P + ATA+CLSYS +P +F G GG LPG SG + ++A SV P+W DGR ++ G G++ G++ + G+W RIEQEVVLN PG+ NG +W++ L L+
Sbjct: 21 GVIGYIAYAALHKDVDQPCSARYPAATRFSLHNSEGKPLSAIALQARAGLRDLGVIDNASVVRSAGGPAEDVLEVKLRQLPAGADQDAAAHNGIEFRWSPPGMRPATAACLSYSVLLPDKFAFGSGGFLPGVFGG-----SGGLSRDSAGG------LSVSPEWDGDGR-PLIAPTAAGSIGRI--SGNRSALPTGRWIRIEQEVVLNEPGKENGQTSLWVDGALSLD 234
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: A0A7Y4XHK8_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XHK8_HYPSQ) HSP 1 Score: 117 bits (294), Expect = 2.460e-28 Identity = 72/220 (32.73%), Postives = 111/220 (50.45%), Query Frame = 1
Query: 64 TTPL---CETRYAGGVLFSLARSSGTPLQPEDIQARLGGLDWGITTNTKVVKEEAVPYSYALEITMKRNSESNQ-DRGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGDGGTLPGFVSDAPTEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSMLHSWNNGQSGQLILDGSKVRMKPGQWTRIEQEVVLNAPGRNNGILRVWINRELMLERYDVAF 711
TTPL C TR+ G F+ ++G PL ++Q R +WG+ N KVV + LE+ + +Q ++ G+GFTW +L A+A+CLSYS ++P FK + G LPG D + KP + F+VR W + G + + G K + G+WT+IEQE+ LN PG+ +G++RVWI+ L + R ++F
Sbjct: 34 TTPLVEPCSTRFPAGQKFTFTGANGKPLSAVELQGRANTREWGLLRNAKVVPGTSGAAESTLEVALASTENEDQVNQNGVGFTWHLPELEKASAACLSYSAYLPKSFKFKESGYLPGLFG-------ARDIAQIDLLKPD-EGFAVRMGWAESGDLGVDVRVPSA-GGHFEGPNRKTLWQTGRWTKIEQELRLNTPGKADGVMRVWIDGGLTINRQGLSF 244
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: UPI0015E7A0E6 (hypothetical protein n=1 Tax=Hyphomicrobium methylovorum TaxID=84 RepID=UPI0015E7A0E6) HSP 1 Score: 110 bits (274), Expect = 1.870e-25 Identity = 69/212 (32.55%), Postives = 103/212 (48.58%), Query Frame = 1
Query: 76 CETRYAGGVLFSLARSSGTPLQPEDIQARLGGLDWGITTNTKVVKEEAVPYSYALEITMKR-NSESNQDRGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGDGGTLPGFVSDAPTEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSMLHSWNNGQSGQLILDGSKVRMKPGQWTRIEQEVVLNAPGRNNGILRVWINRELMLERYDVA 708
C RY G F+L G L P +IQAR+G +WG+ N VV + +L+I ++ + E+N R G GF W +L A + CLSY + +F G LPG T + +D D P F VRP W G + + G S SK +W RIE+EV+LN+ G+NNG++R+W + +++ +R D+
Sbjct: 39 CSGRYPAGKQFALDNERGQILTPMEIQARVGSREWGLLENAVVVGVDGKGQDASLKIVLEPVDDENNPGRNGAGFLWQTPELTEAKSVCLSYRARLSQDFDFEHAGRLPGIY----TALTPSDLDGALPGDS----FIVRPTWLGLGAVGVEVRTSEGAS----WSESKNTWPRDRWVRIEEEVILNSAGKNNGLVRLWADGQMLAQRGDLV 238
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: A0A537S7K1_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S7K1_9PROT) HSP 1 Score: 106 bits (264), Expect = 2.270e-24 Identity = 71/217 (32.72%), Postives = 103/217 (47.47%), Query Frame = 1
Query: 100 VLFSLARSSGTPLQPEDIQARLGGLDWGITTNTKVVKEEAVPYSYALEITMKRNS----ESNQDRGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGDGGTLPGFVSDAPTEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSMLHSWNNGQSGQLILDGSKVRMKP---------GQWTRIEQEVVLNAPGRNNGILRVWINRELMLERYDVAF 711
++F L R G L DIQAR GG D G+ N V++ + P A+ + + + S S +GG+ W PR L + CLSY +P +F GG LPG EQS ND F V+ WRQ G G + + LDG K + + G+W +I+QEV+LN P NG+LRVW++ L +++ D+A+
Sbjct: 1 MVFPLERD-GVVLTATDIQARTGGRDAGLIENVDVIRLKRGPVPIAMSVELPKGSAAPTSSVVPKGGLSLPWQPRTLKDKSTVCLSYQILLPSDFDFNLGGALPGVFGGV--EQS-NDR------------FLVQLGWRQGGAI--------GATNHVTLDGKKWKQQAEAEGYTIPRGRWVKIDQEVILNEPDLENGVLRVWLDGALAIDKADIAY 193
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: A0A847BIK0_9GAMM (Uncharacterized protein n=1 Tax=Halomonadaceae bacterium TaxID=2026746 RepID=A0A847BIK0_9GAMM) HSP 1 Score: 97.8 bits (242), Expect = 7.870e-21 Identity = 76/226 (33.63%), Postives = 110/226 (48.67%), Query Frame = 1
Query: 43 QATTPKPTTPLCETRYAGGVLFSLARSSGTPLQPEDIQARLGGLDWGITTNTKVVKEEAVPYSYALEITMKRNSESNQD--RGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGDGGTLPG-FVSDAPTEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSMLHSWNNGQSGQLILDGSKVRMKPGQWTRIEQEVVLNAPGRNNGILRVWINRELMLERYDVAF 711
+A T P C RYA L+++SG+ L QA WG ++ E + +L + S S D GG GF P L + +CLSY PP+F GG LPG + +AP+ G D D T + FS R WR++G+ L+ + G G I GS G+W ++EQEVVLN PG+ NG++R+WI+ + +LE+ +V F
Sbjct: 16 RAVTGVPQVEACSQRYAAAEAPRLSQASGSGLDAVR-QAFHTSRHWGEENLERLDTELSGLDEASLRVHYPAGSSSPSDTLEGGAGFYSDPPSLRGSERACLSYMLRFPPDFDFVQGGKLPGLYGGEAPS--GGEDVDGT-------QGFSQRLMWRENGQGE-LYPYVVGFEGASIGRGSW-HFPVGRWVQVEQEVVLNDPGQENGLVRIWIDGQPVLEQQNVIF 229
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Match: A0A7W5BYM2_9GAMM (Uncharacterized protein n=1 Tax=Halomonas organivorans TaxID=257772 RepID=A0A7W5BYM2_9GAMM) HSP 1 Score: 89.7 bits (221), Expect = 1.150e-17 Identity = 70/228 (30.70%), Postives = 100/228 (43.86%), Query Frame = 1
Query: 61 PTTPLCETRYAGGVLFSLARSSGTPLQPEDIQARLGG-----LDWGITTNTKVVKEEAVPYSYA-LEITMKRNSES--NQDRGGMGFTWLPRQLAAATASCLSYSFWVPPEFKIGDGGTLPG-FVSDAPTEQSGNDTDETAPAKPAPKPFSVRPQWRQDGRFSMLHSWNNGQSGQLILDGSKVR--MKPGQWTRIEQEVVLNAPGRNNGILRVWINRELMLERYDVAF 711
P P C TRY L + Q ED +A + DWG N +++ A L + + S + D+GG GF P LA A +CL Y P F GG LPG F +AP+ G + D FS+R WR DG+ L+ + G + R GQW +EQE++LN PG++NG+ RVW+N +LE+ + +
Sbjct: 40 PGEPACSTRYP------LVAAPAPATQAEDAKAAVRDGFGTQRDWGTDENVELLAATETGLEEAGLRVLYPAGTSSPGDTDKGGAGFYAKPGALAGAERACLQYRVRFEPGFDFVKGGKLPGLFGGEAPS--GGEEAD-------GKNGFSMRYMWRTDGQGE-LYEYAVGXXXXXXXXXXRGRWTFPTGQWVTLEQEIILNDPGQDNGLARVWVNGRPILEQQGIVY 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13894.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13894.3.1 >prot_P-wetherbeei_contig13894.3.1 ID=prot_P-wetherbeei_contig13894.3.1|Name=mRNA_P-wetherbeei_contig13894.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp MVAGTIGAVMQATTPKPTTPLCETRYAGGVLFSLARSSGTPLQPEDIQARback to top mRNA from alignment at P-wetherbeei_contig13894:1067..1777+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13894.3.1 ID=mRNA_P-wetherbeei_contig13894.3.1|Name=mRNA_P-wetherbeei_contig13894.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig13894:1067..1777+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13894:1067..1777+ >mRNA_P-wetherbeei_contig13894.3.1 ID=mRNA_P-wetherbeei_contig13894.3.1|Name=mRNA_P-wetherbeei_contig13894.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig13894:1067..1777+ (Phaeothamnion wetherbeei SAG_119_79)back to top |