mRNA_P-wetherbeei_contig10306.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10306.3.1
Unique NamemRNA_P-wetherbeei_contig10306.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: A0A521M868_9HYPH (OsmC family peroxiredoxin n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M868_9HYPH)

HSP 1 Score: 282 bits (722), Expect = 5.760e-96
Identity = 135/152 (88.82%), Postives = 144/152 (94.74%), Query Frame = 1
Query:    1 MGDLAELPPPGVVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRLEGA 456
            M D+AELPPPGVVLVEDN+AG FAETVRSG HVL ADEPAANGGND+GPDPY YLLAALG+CTAMTLRMYARQKKWPLQKVRVVLKHDKI+A DCA CET+EGKVDRIERWIELDGPL +EQ+KRLLEIADRCPVHRTLTS+IVITTRLEGA
Sbjct:    1 MSDVAELPPPGVVLVEDNEAGPFAETVRSGAHVLPADEPAANGGNDTGPDPYGYLLAALGACTAMTLRMYARQKKWPLQKVRVVLKHDKIYATDCAACETKEGKVDRIERWIELDGPLGDEQKKRLLEIADRCPVHRTLTSEIVITTRLEGA 152          
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: A0A1Q3KGM5_9PROT (Osmotically inducible protein C n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KGM5_9PROT)

HSP 1 Score: 241 bits (614), Expect = 1.510e-79
Identity = 117/149 (78.52%), Postives = 127/149 (85.23%), Query Frame = 1
Query:    1 MGDLAELPPPGVVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRL 447
            M   A  PPPGVV+VED+DAG  AET+RSG HVLRADEP A GGND+GP PY YLLAALGSCTAMTLRMYAR KKWPLQKV V LKHDKIHA DCA CET+EGKVDRIER I L+GPL +EQ+KRLLEIADRCPVHRTL+S+I I TRL
Sbjct:    1 MDATAAAPPPGVVIVEDSDAGPLAETIRSGAHVLRADEPVAVGGNDTGPGPYDYLLAALGSCTAMTLRMYARLKKWPLQKVTVTLKHDKIHATDCAECETKEGKVDRIERVIALEGPLDDEQRKRLLEIADRCPVHRTLSSEITIPTRL 149          
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: A0A1F3AEC6_9PROT (Osmotically inducible protein C n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3AEC6_9PROT)

HSP 1 Score: 234 bits (596), Expect = 6.400e-77
Identity = 113/138 (81.88%), Postives = 128/138 (92.75%), Query Frame = 1
Query:   34 VVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRL 447
            VVLVED++AG  AET+RSG HVL ADEPAA GGND+GPDPYSYLLAALG+CTAMTLRMYARQKKWPLQKVRV LKHDKIHA DCA+CET+EGKVDRIER IEL+GPLS+EQ++RL EIADRCPVHRTL S+I+I+T+L
Sbjct:    4 VVLVEDSEAGPLAETIRSGAHVLAADEPAALGGNDTGPDPYSYLLAALGTCTAMTLRMYARQKKWPLQKVRVRLKHDKIHATDCASCETKEGKVDRIERSIELEGPLSDEQRQRLREIADRCPVHRTLVSEILISTQL 141          
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: A0A1E4HSB7_9PROT (Osmotically inducible protein C n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4HSB7_9PROT)

HSP 1 Score: 229 bits (585), Expect = 3.960e-75
Identity = 106/147 (72.11%), Postives = 127/147 (86.39%), Query Frame = 1
Query:    1 MGDLAELPPPGVVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITT 441
            M D+A +  PG+V+VEDN  G  +ETVR+G HVL ADEP A GGND+GPDPY+YLLA LG+CTAMTLRMYARQKKWPL+KVRV L+HDKIHA DC +CET++GKVDRI+R IEL+GPL + Q+KRL+EIADRCPVHRTLTS+I+I T
Sbjct:    1 MADVAPVLAPGIVIVEDNGTGPLSETVRAGAHVLAADEPVAKGGNDTGPDPYAYLLAGLGACTAMTLRMYARQKKWPLEKVRVQLQHDKIHATDCESCETKDGKVDRIQRTIELEGPLDDAQRKRLMEIADRCPVHRTLTSEILIQT 147          
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: A0A6A7M8N9_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7M8N9_9PROT)

HSP 1 Score: 227 bits (578), Expect = 4.970e-72
Identity = 109/145 (75.17%), Postives = 123/145 (84.83%), Query Frame = 1
Query:   13 AELPPPGVVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRL 447
            AELPPPGVV+VED   G FAETVR G HVL ADEP A+GG ++GP PY YLLA LG+CTAMTLRMYARQK WPLQKVRV LKHDKIHA DCA CET+EGK+D+I+R I L+GPL E Q++RLL+IADRCPVHRTLTS+I I TRL
Sbjct:  150 AELPPPGVVIVEDRTIGPFAETVRVGTHVLSADEPVASGGTNTGPGPYDYLLAGLGACTAMTLRMYARQKNWPLQKVRVWLKHDKIHAQDCADCETKEGKIDQIDRQIVLEGPLDEAQRERLLQIADRCPVHRTLTSEIKIRTRL 294          
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: A0A1H8Y5C2_9PROT (Uncharacterized OsmC-related protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8Y5C2_9PROT)

HSP 1 Score: 221 bits (563), Expect = 8.610e-72
Identity = 104/145 (71.72%), Postives = 122/145 (84.14%), Query Frame = 1
Query:   13 AELPPPGVVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRL 447
            AELPPPGVV+VED + G FAETVR G HVL ADEP  +GG ++GP PY Y+LA LG+CTAMTLRMYARQK WPLQKVRV LKHDKIHA DCA CET++GK+D+I+R I L+GPL + Q++RLL+IADRCPVHRT TS+I I TRL
Sbjct:    4 AELPPPGVVIVEDRNIGPFAETVRVGTHVLAADEPVLSGGTNTGPSPYDYVLAGLGACTAMTLRMYARQKNWPLQKVRVWLKHDKIHAQDCADCETKDGKIDQIDRQIVLEGPLDQAQRERLLQIADRCPVHRTFTSEIKIRTRL 148          
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: A0A1I2J401_9GAMM (Uncharacterized OsmC-related protein n=1 Tax=Fontimonas thermophila TaxID=1076937 RepID=A0A1I2J401_9GAMM)

HSP 1 Score: 187 bits (476), Expect = 1.660e-58
Identity = 91/149 (61.07%), Postives = 115/149 (77.18%), Query Frame = 1
Query:    1 MGDLAELPPPGVVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRL 447
            M ++    P G V V +   G + + VR GVH+  ADEP   GG++ GP+PY YLLAALGSCT+MTLRMYA +K+ PL++V V+L+H K+HAADCA CETR+GKVD IER I L+GPLSEEQ+ RLLEIAD+CPVHRTLT++I I +RL
Sbjct:    3 MTEIPPQQPQGHVAVYEASVGSYVQHVRMGVHLAFADEPEDAGGSNRGPNPYEYLLAALGSCTSMTLRMYAERKRLPLERVGVMLRHRKVHAADCAECETRDGKVDEIERVITLEGPLSEEQRARLLEIADKCPVHRTLTARIRIVSRL 151          
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: A0A318EBC4_9GAMM (Putative OsmC-like protein n=1 Tax=Sinimarinibacterium flocculans TaxID=985250 RepID=A0A318EBC4_9GAMM)

HSP 1 Score: 186 bits (472), Expect = 6.970e-58
Identity = 93/149 (62.42%), Postives = 114/149 (76.51%), Query Frame = 1
Query:   10 LAELPPP---GVVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRL 447
            L E+PP    G V+V +   GR+ + VR GVH+  ADEP   GG + GP+PY +LLAALG+CT+MTLRMYA  KK PL++V V L H KIHA DCA CETREGKVD+IER I L+GPLS+EQ+ RLLEIA++CPVHRTLTS+I I +RL
Sbjct:    3 LTEIPPQQPHGTVVVHEAGTGRYVQHVRMGVHLADADEPEDVGGQNRGPNPYEFLLAALGTCTSMTLRMYAEMKKLPLERVAVRLVHSKIHAQDCAECETREGKVDQIEREITLEGPLSDEQRARLLEIANKCPVHRTLTSEIRIVSRL 151          
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: A0A1F3ZTB9_9PROT (Osmotically inducible protein C n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZTB9_9PROT)

HSP 1 Score: 189 bits (481), Expect = 5.440e-56
Identity = 95/153 (62.09%), Postives = 115/153 (75.16%), Query Frame = 1
Query:   13 AELPPPGV-----VLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRLEGA 456
            A   P GV     V V +  AGR A+ V  G H L ADEP ++GGND+GP PY  LLAALG+CT+MTLR+YA QK+WPL++V V L+HDKIHAADCA CETR+G+VDRIER IE+ GPL   Q++RLLEIA +CPVHRTL S++VI TRL  A
Sbjct:  258 ASAAPGGVAERDEVTVAETRAGRLAQMVSVGPHRLHADEPVSHGGNDTGPSPYDLLLAALGACTSMTLRLYADQKQWPLERVVVKLRHDKIHAADCAECETRDGRVDRIEREIEITGPLDAAQRQRLLEIASKCPVHRTLHSEVVIPTRLADA 410          
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Match: UPI001E4417C9 (OsmC family protein n=1 Tax=Diaphorobacter sp. NR2-3-3-1 TaxID=2784387 RepID=UPI001E4417C9)

HSP 1 Score: 179 bits (454), Expect = 4.760e-55
Identity = 91/145 (62.76%), Postives = 106/145 (73.10%), Query Frame = 1
Query:   13 AELPPPGVVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPDPYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCETREGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRL 447
            AE  P GVV V D  +G FA  V +G H L +DEP   GG+D G  PY  LL ALG+CTAMTLR+YAR KKWPL+ VRV L H KIHAADCA CET+EGK+DRI+R +EL GPL   Q+ RLLEIAD+CPVHRTL S++ I T L
Sbjct:   16 AESLPVGVVRVSDR-SGNFAVNVEAGRHTLVSDEPVGVGGDDLGLGPYDLLLGALGACTAMTLRLYARHKKWPLEDVRVTLTHAKIHAADCAECETKEGKIDRIQRTVELAGPLDAPQRARLLEIADKCPVHRTLKSEVEIKTLL 159          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10306.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521M868_9HYPH5.760e-9688.82OsmC family peroxiredoxin n=1 Tax=Reyranella sp. T... [more]
A0A1Q3KGM5_9PROT1.510e-7978.52Osmotically inducible protein C n=1 Tax=Alphaprote... [more]
A0A1F3AEC6_9PROT6.400e-7781.88Osmotically inducible protein C n=1 Tax=Alphaprote... [more]
A0A1E4HSB7_9PROT3.960e-7572.11Osmotically inducible protein C n=3 Tax=Alphaprote... [more]
A0A6A7M8N9_9PROT4.970e-7275.17Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A1H8Y5C2_9PROT8.610e-7271.72Uncharacterized OsmC-related protein n=2 Tax=Alpha... [more]
A0A1I2J401_9GAMM1.660e-5861.07Uncharacterized OsmC-related protein n=1 Tax=Fonti... [more]
A0A318EBC4_9GAMM6.970e-5862.42Putative OsmC-like protein n=1 Tax=Sinimarinibacte... [more]
A0A1F3ZTB9_9PROT5.440e-5662.09Osmotically inducible protein C n=1 Tax=Betaproteo... [more]
UPI001E4417C94.760e-5562.76OsmC family protein n=1 Tax=Diaphorobacter sp. NR2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10306contigP-wetherbeei_contig10306:1537..1998 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000010_gene4019
PFAMsHydrolase_4,OsmC
Model size462
Max annot lvl204441|Rhodospirillales
KEGG koko:K06889,ko:K07397
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.95e-77
EggNOG OGsCOG1765@1|root,COG1765@2|Bacteria,1N2BT@1224|Proteobacteria,2TQN7@28211|Alphaproteobacteria,2JQYF@204441|Rhodospirillales
DescriptionOsmC-like protein
Cds size462
COG categoryO
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185862.8741882-CDS-P-wetherbeei_contig10306:1536..19981683185862.8741882-CDS-P-wetherbeei_contig10306:1536..1998Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10306 1537..1998 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10306.3.1prot_P-wetherbeei_contig10306.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10306 1537..1998 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10306.3.1

>prot_P-wetherbeei_contig10306.3.1 ID=prot_P-wetherbeei_contig10306.3.1|Name=mRNA_P-wetherbeei_contig10306.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
MGDLAELPPPGVVLVEDNDAGRFAETVRSGVHVLRADEPAANGGNDSGPD
PYSYLLAALGSCTAMTLRMYARQKKWPLQKVRVVLKHDKIHAADCATCET
REGKVDRIERWIELDGPLSEEQQKRLLEIADRCPVHRTLTSKIVITTRLE
GAR*
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mRNA from alignment at P-wetherbeei_contig10306:1537..1998+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10306.3.1 ID=mRNA_P-wetherbeei_contig10306.3.1|Name=mRNA_P-wetherbeei_contig10306.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig10306:1537..1998+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGACCTGGCGGAACTTCCTCCTCCCGGCGTCGTGCTCGTCGAGGA TAATGATGCTGGCCGGTTTGCCGAGACCGTGCGCAGCGGCGTGCACGTGC TGCGCGCCGACGAACCGGCGGCGAATGGCGGCAACGACTCAGGTCCGGAT CCCTACAGCTATCTGCTGGCGGCACTGGGCTCTTGCACCGCGATGACGCT CCGCATGTACGCGCGCCAGAAAAAATGGCCGCTGCAGAAAGTGCGCGTGG TTCTGAAGCACGACAAGATCCACGCGGCCGACTGTGCGACCTGCGAGACC AGGGAAGGCAAGGTTGACCGGATCGAGCGGTGGATCGAACTCGACGGCCC GCTCAGCGAGGAACAGCAAAAGCGGCTTCTGGAGATCGCCGATCGCTGTC CGGTACACCGCACCTTGACCTCGAAGATCGTGATCACGACGCGGCTCGAA GGCGCACGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10306:1537..1998+

>mRNA_P-wetherbeei_contig10306.3.1 ID=mRNA_P-wetherbeei_contig10306.3.1|Name=mRNA_P-wetherbeei_contig10306.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig10306:1537..1998+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGACCTGGCGGAACTTCCTCCTCCCGGCGTCGTGCTCGTCGAGGA
TAATGATGCTGGCCGGTTTGCCGAGACCGTGCGCAGCGGCGTGCACGTGC
TGCGCGCCGACGAACCGGCGGCGAATGGCGGCAACGACTCAGGTCCGGAT
CCCTACAGCTATCTGCTGGCGGCACTGGGCTCTTGCACCGCGATGACGCT
CCGCATGTACGCGCGCCAGAAAAAATGGCCGCTGCAGAAAGTGCGCGTGG
TTCTGAAGCACGACAAGATCCACGCGGCCGACTGTGCGACCTGCGAGACC
AGGGAAGGCAAGGTTGACCGGATCGAGCGGTGGATCGAACTCGACGGCCC
GCTCAGCGAGGAACAGCAAAAGCGGCTTCTGGAGATCGCCGATCGCTGTC
CGGTACACCGCACCTTGACCTCGAAGATCGTGATCACGACGCGGCTCGAA
GGCGCACGCTGA
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