mRNA_P-wetherbeei_contig13602.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13602.1.1
Unique NamemRNA_P-wetherbeei_contig13602.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A6N7GUW2_9HYPH (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GUW2_9HYPH)

HSP 1 Score: 300 bits (768), Expect = 1.430e-99
Identity = 164/247 (66.40%), Postives = 194/247 (78.54%), Query Frame = 1
Query:   67 AADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNP-DGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMK 804
            A + A MKELAPTGKLRVAIAVGP+ SA++++++P  GK +GV +DL  A+ +KLGVPVE V Y  +GEI  S   G WDVTF PVD++RK  +DFG  YHLLQSTYLVAPGS I  LAEAN AGVRIA V  TAT RAS+  +PNAT + +   D A+ L+KEGK DAI LSRES+GG+   LPGSRVL+  FLNSTTA+AVP+NKPAA A+V+EFIEEAKASGLVRRALD +GLK SQVAPAGMK
Sbjct:    2 AVNDAAMKELAPTGKLRVAIAVGPSASALWTVRDPATGKPKGVPVDLGTAMAQKLGVPVELVEYASSGEIVASRDKGAWDVTFVPVDDDRKAAIDFGAPYHLLQSTYLVAPGSTIKTLAEANRAGVRIAIVDGTATGRASISASPNATTVKVKNPDEAVGLMKEGKLDAIALSRESVGGLVDALPGSRVLEEAFLNSTTAVAVPQNKPAARAFVTEFIEEAKASGLVRRALDAMGLKTSQVAPAGMK 248          
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A327L5E8_9HYPH (PBPb domain-containing protein n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327L5E8_9HYPH)

HSP 1 Score: 276 bits (707), Expect = 4.570e-90
Identity = 144/248 (58.06%), Postives = 188/248 (75.81%), Query Frame = 1
Query:   67 AADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPDGKR-RGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
            AADP V+ ELAPTG+LRVA+ VGP PSA+Y++++  G   RGVT+ LA  L ++ GVP+ FVP   TGEIQ SAA GVWDV+F PVD+ER+  VDFG+AYH+L+STYLV  GS+I VLA+A+A G RI GV+DTATLRASMR +P ATH+A+   +  + ++  G ADAI + RESLGG+A ++ GSR+LDG FL ++TA+AVP+ +P A A+ +  +EEAKASGLVR A D +GL  + VAPAG  P
Sbjct:   19 AADPRVLAELAPTGRLRVAVVVGPTPSAIYAVRDRAGDSLRGVTVTLAQMLAERAGVPLWFVPLRSTGEIQASAAGGVWDVSFLPVDDERRALVDFGSAYHVLRSTYLVPAGSRIRVLADADAPGTRITGVRDTATLRASMRASPRATHLAVESPEDLVAMMHGGNADAIAMGRESLGGIAGEIEGSRILDGAFLTTSTAVAVPQGRPRARAFAAAVVEEAKASGLVREAFDRLGLTTAVVAPAGTWP 266          
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A1W6ZP97_9HYPH (PBPb domain-containing protein n=2 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZP97_9HYPH)

HSP 1 Score: 272 bits (696), Expect = 3.260e-88
Identity = 151/269 (56.13%), Postives = 187/269 (69.52%), Query Frame = 1
Query:    1 IMKFSAVAGALCAVFVTVASAQAADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
            +M+   V G + A F     A+A D A+ K+LAP   LRVAIAVGPAPSA+Y++++  G  RGV +DL  AL KK+G PV+FV YL +G I   A  G+WDVTF PVD  R K V FG AYH+L STYLV   + +  +AEA+  GVRIA V  TAT RA+M  + NAT I + GVD  + L+K+ KADAI LSRESL G+  KLPGSR+LDGG LNS TA AVP  KP ALAY++ F+EE KASG VR++ DD+GLK + VAPAG KP
Sbjct:   12 VMRLVLVCGLVVASFAIAKDARANDDAI-KQLAPADTLRVAIAVGPAPSALYTVKDASGTPRGVAVDLGAALAKKIGKPVQFVEYLASGAITNDADKGIWDVTFMPVDAARAKRVSFGAAYHVLSSTYLVTEKAPVKTVAEADKPGVRIAIVDGTATSRAAMAASKNATFITIGGVDEGVSLLKDNKADAIALSRESLTGLIGKLPGSRILDGGILNSYTAAAVPNGKPEALAYLTAFVEEMKASGAVRKSFDDIGLKTAVVAPAGAKP 279          
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A516H2L2_9PROT (Transporter substrate-binding domain-containing protein n=1 Tax=Ferrovibrio terrae TaxID=2594003 RepID=A0A516H2L2_9PROT)

HSP 1 Score: 260 bits (665), Expect = 1.100e-83
Identity = 143/246 (58.13%), Postives = 175/246 (71.14%), Query Frame = 1
Query:   70 ADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
            A  A + ELAP G +RVAIA+ PAPSA+Y++++ +G+ RGVT+DL HAL  KLG PV+FV Y  TGEI  +  +  WDVTF P D  R K VDFG  YHLLQST LV+       LAE +   +RIAGV+ TAT RA+      A    + GVD A+ LVK G A+AI LSRESL G+  KLPGSRVLDGGFLNSTT++AVP+ K AALA+VS F+EE KA+G +RR+LD +GL ASQVAP GMKP
Sbjct:   22 AQTAPLNELAPKGSVRVAIAISPAPSALYAVKDSNGQYRGVTVDLGHALAAKLGKPVQFVAYASTGEITAAGDNDAWDVTFMPHDAARAKLVDFGTPYHLLQSTLLVSDKVSAKTLAEVDRPDIRIAGVEGTATARAAAAHFKQAKITHVRGVDDAVALVKAGNAEAIGLSRESLLGLRDKLPGSRVLDGGFLNSTTSVAVPRGKAAALAWVSAFVEEQKANGSIRRSLDAMGLTASQVAPPGMKP 267          
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: UPI0017D7CDAC (Transporter substrate-binding domain-containing protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI0017D7CDAC)

HSP 1 Score: 257 bits (657), Expect = 1.620e-82
Identity = 143/257 (55.64%), Postives = 185/257 (71.98%), Query Frame = 1
Query:   52 VASAQAAD----PAVMKELAPTGKLRVAIAVGPAPSAMYSLQN-PDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
            V SA A D    PAV++ELAPT +LRVA+ +   PSA+Y++++ P G  RGVT+ LA AL    G+P++ V + GTGEIQ +A SG WDV F P DEER+  VDFG+AYH+LQSTYLV  GS+I  +A+A+A GVRI  V+D+ATLRASMR AP ATH+A+   D A+ ++  G ADAI + RESL G+A ++ GSR+LD  FL +TTA+AVPK +P A A V+ F+EEAKASGLVRR  D  GL ++ VAP G  P
Sbjct:    8 VTSAAAEDIPISPAVLEELAPTRRLRVAVPISLTPSAVYAVRDYPTGPLRGVTVALAEALAAATGLPLDLVAFRGTGEIQMTAESGRWDVAFLPADEERRALVDFGSAYHILQSTYLVPVGSRIKCVADADAPGVRITAVRDSATLRASMRAAPRATHLAVDSPDDAVAMMHGGNADAIAMGRESLLGMAPEIAGSRILDEYFLTTTTAVAVPKGRPRARALVAAFVEEAKASGLVRRVFDRFGLVSALVAPPGAAP 264          
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A0S3PP21_9BRAD (ABC transporter glutamine-binding protein GlnH n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PP21_9BRAD)

HSP 1 Score: 252 bits (644), Expect = 1.710e-80
Identity = 143/251 (56.97%), Postives = 180/251 (71.71%), Query Frame = 1
Query:   58 SAQAAD-PAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPD-GKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMK 804
            SAQA D  A MKELAPTG LRVA+AVGPA SA+++ ++   G+ RGVTIDL  ALG KLG+PV FV    +GEI  SA+SG WDV F PVD+ERKK VDFG  Y L +STY+VAPGSKI  +AE +  GVR+ GV++TAT+R + RT  N   I   G+D A+ ++K+GKADAI L RESL  +  + PG+RVLDG F  + TAIAVPK + AAL  +++FIE AK  G VRRA D  GL+ ++VAPAG +
Sbjct:   17 SAQAQDREATMKELAPTGTLRVAVAVGPAASALWTTRDATTGRPRGVTIDLGTALGAKLGIPVTFVELKSSGEIIESASSGTWDVGFTPVDDERKKLVDFGPNYALGESTYMVAPGSKIQSIAEVDRPGVRVVGVENTATIRTARRTLKNTEAIGTKGLDEAVAMMKDGKADAIALGRESLESLVDQFPGARVLDGYFHATGTAIAVPKGRAAALKIMTDFIEAAKQDGTVRRAFDAAGLQKTKVAPAGSR 267          
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A327KPH9_9HYPH (PBPb domain-containing protein n=2 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KPH9_9HYPH)

HSP 1 Score: 249 bits (635), Expect = 3.590e-79
Identity = 131/243 (53.91%), Postives = 180/243 (74.07%), Query Frame = 1
Query:   70 ADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNP-DGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPA 795
            AD  +  ELAPTG+LRVAIAVGP PSA+Y+++   +G+ RGVT+ LA AL    G+P+E VP+  +GEIQ +A S +WDV+F PVD+ER++ VDFG AYH+LQS+YLV  GS I  LAEA+A  V I GV+++ATLRAS+R +P A+H+ +   + A+ ++  G ADAI + RESL G+ T++ GSR+L G FL +TTA+ +PK +PAALA V+  +EEAKA+GLV+RA + VGL  + V PA
Sbjct:   18 ADRELSAELAPTGRLRVAIAVGPTPSAVYAVRGEAEGELRGVTVALAEALAAATGLPLEIVPFRSSGEIQATAGSDLWDVSFLPVDDERRRHVDFGAAYHILQSSYLVPAGSPIHRLAEADAPDVHIVGVRNSATLRASLRASPRASHVPVETPEDAVAMMHGGMADAIAMGRESLSGLVTQIEGSRILPGSFLTTTTAVVLPKGRPAALARVTALVEEAKAAGLVQRAFERVGLAGANVPPA 260          
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A7C4XSA4_9HYPH (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XSA4_9HYPH)

HSP 1 Score: 247 bits (631), Expect = 1.120e-78
Identity = 133/244 (54.51%), Postives = 175/244 (71.72%), Query Frame = 1
Query:   79 AVMKELAPTGKLRVAIAVGPAPSA-MYSLQNPDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
            A +KEL+P+G+LRV +AVGP   A   ++    GK RGV +DL   L  +LGVPVE+VPY  +G +  +AAS  WDV F PVDEER+K VDFG A+ +LQSTYLVAPGS +   A+ +  G+R+AG+++TAT RA+ R+  +   + +   D  + L++ G+ +A+  SRE+L G+A KLPG+RVLDG FLNS  A+AVPK +PAALAYVS+FIEEAKASGLVRRALD+ GL  S VAP G  P
Sbjct:   14 AAIKELSPSGRLRVGVAVGPTVGAGNVAIDAATGKPRGVAVDLGKELADRLGVPVEYVPYPNSGALTDAAASNAWDVAFLPVDEERRKKVDFGPAHMVLQSTYLVAPGSAVKTHADVDRLGIRVAGIENTATTRAAQRSLKSVVIMNVKTADELLSLLRTGQVEAVVQSREALLGLAKKLPGARVLDGSFLNSFVAVAVPKGRPAALAYVSKFIEEAKASGLVRRALDNAGLTTSVVAPPGPMP 257          
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: J6LHZ2_9RHOB (Putative periplasmic-binding protein n=2 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J6LHZ2_9RHOB)

HSP 1 Score: 241 bits (615), Expect = 1.540e-76
Identity = 128/234 (54.70%), Postives = 169/234 (72.22%), Query Frame = 1
Query:  100 PTGKLRVAIAVGPAPSAMYSLQNPDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGM 801
            PTG+LRVAIAVG  PSA +++++  G   GVT+DLA AL  +LGVPVE++ Y  +GEIQ +AA G WD+ F PVD +R++ V FG AYHL++++YLV  GS I  +A+A+A  VRIAGV+DTATLRAS   +P A H+AL   + A+ L+  G ADAI L RESL   + ++ G+RVLDG FL + TA+AVP+ +P ALA VS F+E+AKA+G VRR LD  GL  + VAP GM
Sbjct:    2 PTGRLRVAIAVGATPSAAFAVRDAAGALHGVTVDLAAALADELGVPVEWLAYRSSGEIQNAAARGAWDLAFMPVDAQRRQVVAFGAAYHLMRASYLVPAGSPIKRIADADAPWVRIAGVRDTATLRASALASPRAVHLALDSSEDAVTLMTSGGADAIALGRESLAATSARIAGARVLDGAFLEARTAVAVPRGRPVALALVSGFVEQAKATGRVRRWLDAAGLTEASVAPPGM 235          
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A327K1Y2_9HYPH (PBPb domain-containing protein n=4 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327K1Y2_9HYPH)

HSP 1 Score: 230 bits (586), Expect = 1.350e-71
Identity = 126/248 (50.81%), Postives = 168/248 (67.74%), Query Frame = 1
Query:   67 AADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPD-GKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
            A +P  + ELAPTG+LR A+ VG APSA  ++++P+ G  RGV + L  AL   L +P++ VP+LG GEI+ +A   +WDV+  P D+ER+K V FG AYH+L   YLV  GS I  L +A+A GVRI G+   A LR S+R +P ATHI +   D A+ L+  G AD I L RESL  VA+ + GSR+LDG F  +TTA+AVP+ +  A+  VS F+E+AKASGLVRRALD++GL  + VAPAG  P
Sbjct:   30 AGEPTAVDELAPTGRLRAAMVVGLAPSAFAAVRDPESGGLRGVPVVLFQALADSLALPLDIVPFLGVGEIELTAGCDMWDVSLLPADDERRKAVTFGAAYHILNCAYLVPAGSPIKRLGDADAPGVRIVGLAGGAALRGSLRASPRATHITVASPDDAVALMHGGSADVIALGRESLRAVASLIEGSRILDGTFFTTTTAVAVPRGRLRAVGLVSAFVEDAKASGLVRRALDELGLPDAPVAPAGAYP 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7GUW2_9HYPH1.430e-9966.40Transporter substrate-binding domain-containing pr... [more]
A0A327L5E8_9HYPH4.570e-9058.06PBPb domain-containing protein n=1 Tax=Rhodoplanes... [more]
A0A1W6ZP97_9HYPH3.260e-8856.13PBPb domain-containing protein n=2 Tax=Pseudorhodo... [more]
A0A516H2L2_9PROT1.100e-8358.13Transporter substrate-binding domain-containing pr... [more]
UPI0017D7CDAC1.620e-8255.64Transporter substrate-binding domain-containing pr... [more]
A0A0S3PP21_9BRAD1.710e-8056.97ABC transporter glutamine-binding protein GlnH n=1... [more]
A0A327KPH9_9HYPH3.590e-7953.91PBPb domain-containing protein n=2 Tax=Rhodoplanes... [more]
A0A7C4XSA4_9HYPH1.120e-7854.51Transporter substrate-binding domain-containing pr... [more]
J6LHZ2_9RHOB1.540e-7654.70Putative periplasmic-binding protein n=2 Tax=Rhodo... [more]
A0A327K1Y2_9HYPH1.350e-7150.81PBPb domain-containing protein n=4 Tax=Rhodoplanes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13602contigP-wetherbeei_contig13602:319..1128 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1187851.A33M_2085
PFAMsSBP_bac_3
Model size810
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02030
KEGG TC3.A.1.3
KEGG ModuleM00236
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.44e-77
EggNOG OGsCOG0834@1|root,COG0834@2|Bacteria,1N2RR@1224|Proteobacteria,2U0AF@28211|Alphaproteobacteria
DescriptionCOG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain
Cds size807
COG categoryET
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185992.1582901-CDS-P-wetherbeei_contig13602:318..11251683185992.1582901-CDS-P-wetherbeei_contig13602:318..1125Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13602 319..1125 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185992.1706474-UTR-P-wetherbeei_contig13602:1125..11281683185992.1706474-UTR-P-wetherbeei_contig13602:1125..1128Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13602 1126..1128 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13602.1.1prot_P-wetherbeei_contig13602.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13602 319..1125 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13602.1.1

>prot_P-wetherbeei_contig13602.1.1 ID=prot_P-wetherbeei_contig13602.1.1|Name=mRNA_P-wetherbeei_contig13602.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
MKFSAVAGALCAVFVTVASAQAADPAVMKELAPTGKLRVAIAVGPAPSAM
YSLQNPDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWD
VTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAG
VKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGV
ATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRA
LDDVGLKASQVAPAGMKP*
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mRNA from alignment at P-wetherbeei_contig13602:319..1128-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13602.1.1 ID=mRNA_P-wetherbeei_contig13602.1.1|Name=mRNA_P-wetherbeei_contig13602.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig13602:319..1128- (Phaeothamnion wetherbeei SAG_119_79)
ATCATGAAATTTTCCGCCGTTGCCGGCGCGTTGTGTGCCGTGTTCGTCAC TGTCGCGAGTGCGCAGGCTGCCGATCCAGCGGTGATGAAAGAACTCGCGC CGACCGGCAAGCTGCGGGTTGCCATCGCGGTCGGACCCGCGCCCTCGGCC ATGTATTCGCTGCAAAATCCCGATGGCAAACGGCGCGGCGTGACCATCGA TCTCGCACATGCGCTGGGCAAGAAGCTCGGAGTGCCGGTCGAATTCGTGC CCTATCTCGGGACGGGTGAAATCCAGGGCTCGGCCGCCTCCGGCGTCTGG GACGTGACCTTTGCGCCGGTCGATGAGGAGCGCAAAAAGTTCGTCGACTT CGGCAACGCGTATCATCTCCTGCAAAGCACGTATCTCGTGGCTCCCGGCT CCAAGATCATGGTGCTGGCGGAAGCCAACGCAGCGGGCGTCCGCATCGCG GGCGTCAAGGACACGGCGACGCTTCGCGCCTCAATGCGGACCGCGCCGAA CGCCACGCACATCGCGCTGCCGGGCGTCGATGCCGCGATCGAATTGGTCA AGGAAGGGAAGGCCGACGCGATCCCGCTCAGCCGGGAGTCACTCGGCGGC GTGGCCACCAAGCTTCCGGGCTCTCGCGTGCTCGACGGCGGATTTCTGAA TTCGACGACTGCGATCGCAGTGCCGAAGAACAAGCCGGCCGCGCTCGCCT ACGTCAGCGAATTCATCGAAGAGGCCAAGGCCTCGGGTCTGGTGCGCCGT GCGCTCGATGATGTCGGGCTCAAGGCCTCGCAGGTGGCGCCGGCCGGCAT GAAGCCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13602:319..1128-

>mRNA_P-wetherbeei_contig13602.1.1 ID=mRNA_P-wetherbeei_contig13602.1.1|Name=mRNA_P-wetherbeei_contig13602.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig13602:319..1128- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAATTTTCCGCCGTTGCCGGCGCGTTGTGTGCCGTGTTCGTCACTGT
CGCGAGTGCGCAGGCTGCCGATCCAGCGGTGATGAAAGAACTCGCGCCGA
CCGGCAAGCTGCGGGTTGCCATCGCGGTCGGACCCGCGCCCTCGGCCATG
TATTCGCTGCAAAATCCCGATGGCAAACGGCGCGGCGTGACCATCGATCT
CGCACATGCGCTGGGCAAGAAGCTCGGAGTGCCGGTCGAATTCGTGCCCT
ATCTCGGGACGGGTGAAATCCAGGGCTCGGCCGCCTCCGGCGTCTGGGAC
GTGACCTTTGCGCCGGTCGATGAGGAGCGCAAAAAGTTCGTCGACTTCGG
CAACGCGTATCATCTCCTGCAAAGCACGTATCTCGTGGCTCCCGGCTCCA
AGATCATGGTGCTGGCGGAAGCCAACGCAGCGGGCGTCCGCATCGCGGGC
GTCAAGGACACGGCGACGCTTCGCGCCTCAATGCGGACCGCGCCGAACGC
CACGCACATCGCGCTGCCGGGCGTCGATGCCGCGATCGAATTGGTCAAGG
AAGGGAAGGCCGACGCGATCCCGCTCAGCCGGGAGTCACTCGGCGGCGTG
GCCACCAAGCTTCCGGGCTCTCGCGTGCTCGACGGCGGATTTCTGAATTC
GACGACTGCGATCGCAGTGCCGAAGAACAAGCCGGCCGCGCTCGCCTACG
TCAGCGAATTCATCGAAGAGGCCAAGGCCTCGGGTCTGGTGCGCCGTGCG
CTCGATGATGTCGGGCTCAAGGCCTCGCAGGTGGCGCCGGCCGGCATGAA
GCCCTGA
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