mRNA_P-wetherbeei_contig13600.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13600.2.1
Unique NamemRNA_P-wetherbeei_contig13600.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A521VK01_9PROT (Heme biosynthesis protein HemY n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VK01_9PROT)

HSP 1 Score: 142 bits (359), Expect = 9.580e-39
Identity = 74/114 (64.91%), Postives = 86/114 (75.44%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAGLFAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFARAESDARRAWVAG 342
            MRALFWL+AVFA AVALAI GR  + YAL VYPPWR+E+SL+ F+V     FA+ Y   RLV HAL LP+HVRAYRERRR E+ + AL  + QAYLEGRFARAE +AR AW  G
Sbjct:    1 MRALFWLVAVFAAAVALAIFGRSQESYALLVYPPWRIEISLLLFVVGLLAAFALAYIVIRLVHHALELPVHVRAYRERRRRERGQVALASALQAYLEGRFARAEREARLAWEDG 114          
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A537FVM4_9PROT (Heme biosynthesis protein HemY (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537FVM4_9PROT)

HSP 1 Score: 127 bits (320), Expect = 5.940e-34
Identity = 68/114 (59.65%), Postives = 85/114 (74.56%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAGLFAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFARAESDARRAWVAG 342
            MRALFW+LAVFA AVAL I+GR   GY +FVYPP+RVE+SL FF+V +   F +LY   RL+ HA++LP +VRAYR RRR E+A  AL  + QAY EGR+ARAE +A  A+ AG
Sbjct:    1 MRALFWVLAVFAAAVALVILGRAGAGYVMFVYPPYRVELSLPFFVVASLAGFVLLYAAMRLLGHAVSLPTYVRAYRSRRRRERAHAALAAALQAYYEGRYARAEKEAAAAFEAG 114          
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A1F4AYY7_9PROT (HemY_N domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AYY7_9PROT)

HSP 1 Score: 129 bits (324), Expect = 1.300e-33
Identity = 67/102 (65.69%), Postives = 79/102 (77.45%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAGLFAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFAR 306
            MRALFWL+AVFA AVALA++GR  D YALFVYPPWR+E+SL+ F+V  A  F V Y   RLV H L+LPLHVRAYRERR  E++  AL  + QAYLEGR+AR
Sbjct:    1 MRALFWLVAVFAAAVALAVLGRAQDSYALFVYPPWRIEISLLLFVVGLAFAFGVGYAVVRLVHHTLSLPLHVRAYRERRSRERSHAALALALQAYLEGRYAR 102          
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A1F3YUB0_9PROT (HemY_N domain-containing protein n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YUB0_9PROT)

HSP 1 Score: 126 bits (316), Expect = 1.980e-32
Identity = 66/114 (57.89%), Postives = 81/114 (71.05%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAGLFAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFARAESDARRAWVAG 342
            MRALFWL+AVFA AVALA+ GR +DGY L VYPPWRVE+SL+  ++  A  FA+ Y   RL+ H L LP  VRA+RERR+ + A+ AL  +   Y EGRFARAE +A  AW AG
Sbjct:    2 MRALFWLVAVFAAAVALALAGRVSDGYVLVVYPPWRVELSLLLSVLAVAAAFALAYVTVRLISHTLALPAQVRAFRERRQRDHAQTALAAALLCYFEGRFARAEKEAGLAWEAG 115          
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A0S8B9E4_9PROT (HemY_N domain-containing protein (Fragment) n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B9E4_9PROT)

HSP 1 Score: 120 bits (302), Expect = 5.580e-32
Identity = 67/114 (58.77%), Postives = 82/114 (71.93%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAGLFAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFARAESDARRAWVAG 342
            MR L WLL VFA A+ALA++G    GY LFVYPP+RVE+SLI F+++A   FAVLYF ARL+   L LP  +RAYR RRR  +A+ AL+ S QAY EGR+ RAE DA RA+  G
Sbjct:    1 MRGLIWLLIVFAAAIALALVGARETGYVLFVYPPYRVELSLILFVLVALLGFAVLYFAARLLYQLLALPGRLRAYRARRRQARAQGALVASLQAYFEGRYLRAEKDAGRAYDGG 114          
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A537BNS7_9PROT (Heme biosynthesis protein HemY n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BNS7_9PROT)

HSP 1 Score: 122 bits (305), Expect = 6.330e-31
Identity = 63/114 (55.26%), Postives = 83/114 (72.81%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAGLFAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFARAESDARRAWVAG 342
            MR+LFWL+AVFA AVAL I+GR   GY +FVYPP+RVE+S++FF+  +   F +LY   RL+ H ++LP +VRAYR R R E+A  AL  + QAY EGR+ARAE +A  A+ AG
Sbjct:    1 MRSLFWLVAVFAAAVALVILGRAGGGYVMFVYPPYRVELSMLFFVAASLATFLLLYAALRLLGHTVSLPTYVRAYRARGRRERAHAALAAALQAYYEGRYARAEKEAAVAFEAG 114          
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A521Z3F5_9PROT (Heme biosynthesis protein HemY n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z3F5_9PROT)

HSP 1 Score: 120 bits (302), Expect = 2.200e-30
Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAG-LFAVLYFFA--RLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFARAESDARRAWVAG 342
            MR+LFWLLAVFA AVAL I+GR + GY LF+YPP+RVEVS++FF   AAG L A L F+A  RLV HA++LP +VRA+R RRR E+A  AL G+ QAY EGR+ RAE +A  A+  G
Sbjct:    1 MRSLFWLLAVFAAAVALVILGRVDAGYVLFIYPPYRVEVSMVFF---AAGVLVAFLAFYALLRLVGHAVSLPAYVRAFRSRRRRERAHAALSGALQAYYEGRYDRAEKEAAVAFETG 114          
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A1F4FD97_9PROT (HemY_N domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FD97_9PROT)

HSP 1 Score: 120 bits (300), Expect = 4.240e-30
Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAGL---FAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFARAESDARRAWVAG 342
            MR+LFWLLAVFA AVAL I+GR + GY LF+YPP+RVEVS++FF   AAGL   F  LY   RL+ HAL+LP +VRA+R RRR ++A  AL  + QAY EG + RAE +A  A+  G
Sbjct:    1 MRSLFWLLAVFAAAVALVIVGRADGGYVLFIYPPYRVEVSMLFF---AAGLVAAFIALYALLRLLSHALSLPAYVRAFRSRRRRDRAHAALASALQAYYEGGYERAEKEAALAFDTG 114          
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A536WF00_9PROT (HemY_N domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WF00_9PROT)

HSP 1 Score: 116 bits (290), Expect = 7.040e-30
Identity = 66/114 (57.89%), Postives = 79/114 (69.30%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAGLFAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFARAESDARRAWVAG 342
            MR+L WLLAVFA AVAL I+GR + GY LFVYPP+RVEV++ FF + AA  FA+LY   RL+   L LP  VRAYR RRR E+A  AL  + QAY EGR+ RAE  A  A+  G
Sbjct:    1 MRSLVWLLAVFATAVALVILGRVDAGYVLFVYPPYRVEVTMFFFALAAAASFAILYAGVRLLGQILALPATVRAYRARRRRERAHGALAAALQAYYEGRYRRAERQAALAFEIG 114          
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Match: A0A536SG37_9PROT (HemY_N domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SG37_9PROT)

HSP 1 Score: 112 bits (280), Expect = 2.680e-29
Identity = 65/110 (59.09%), Postives = 73/110 (66.36%), Query Frame = 1
Query:    1 MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAGLFAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRFARAESDARRA 330
            M+ L WLLA  A AVALA+  RGNDGYALFV  PWR E+SL    VL    FA  YF  R+V H L LP HVRA+RERRR E+ R A+LG+ QA  EGRFAR E  A  A
Sbjct:    1 MKGLLWLLAASALAVALALALRGNDGYALFVLHPWRAEISLNLLAVLLIVAFAAGYFLVRMVWHTLRLPSHVRAFRERRRDERGRAAVLGAMQALFEGRFARTEKLASEA 110          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13600.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521VK01_9PROT9.580e-3964.91Heme biosynthesis protein HemY n=3 Tax=Betaproteob... [more]
A0A537FVM4_9PROT5.940e-3459.65Heme biosynthesis protein HemY (Fragment) n=1 Tax=... [more]
A0A1F4AYY7_9PROT1.300e-3365.69HemY_N domain-containing protein n=1 Tax=Betaprote... [more]
A0A1F3YUB0_9PROT1.980e-3257.89HemY_N domain-containing protein n=1 Tax=Betaprote... [more]
A0A0S8B9E4_9PROT5.580e-3258.77HemY_N domain-containing protein (Fragment) n=1 Ta... [more]
A0A537BNS7_9PROT6.330e-3155.26Heme biosynthesis protein HemY n=4 Tax=Betaproteob... [more]
A0A521Z3F5_9PROT2.200e-3060.68Heme biosynthesis protein HemY n=1 Tax=Betaproteob... [more]
A0A1F4FD97_9PROT4.240e-3057.26HemY_N domain-containing protein n=1 Tax=Betaprote... [more]
A0A536WF00_9PROT7.040e-3057.89HemY_N domain-containing protein n=1 Tax=Betaprote... [more]
A0A536SG37_9PROT2.680e-2959.09HemY_N domain-containing protein n=1 Tax=Betaprote... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13600contigP-wetherbeei_contig13600:1473..1814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog62928.azo0996
Preferred namehemY
PFAMsHemY_N
Model size342
Max annot lvl206389|Rhodocyclales
KEGG koko:K02498
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.55e-23
EggNOG OGsCOG3071@1|root,COG3071@2|Bacteria,1MU7A@1224|Proteobacteria,2VK6P@28216|Betaproteobacteria,2KVAI@206389|Rhodocyclales
Descriptionenzyme of heme biosynthesis
Cds size342
COG categoryH
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185992.0696654-CDS-P-wetherbeei_contig13600:1472..18141683185992.0696654-CDS-P-wetherbeei_contig13600:1472..1814Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13600 1473..1814 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13600.2.1prot_P-wetherbeei_contig13600.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13600 1473..1814 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13600.2.1

>prot_P-wetherbeei_contig13600.2.1 ID=prot_P-wetherbeei_contig13600.2.1|Name=mRNA_P-wetherbeei_contig13600.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp
MRALFWLLAVFAGAVALAIIGRGNDGYALFVYPPWRVEVSLIFFIVLAAG
LFAVLYFFARLVDHALNLPLHVRAYRERRRAEKARDALLGSAQAYLEGRF
ARAESDARRAWVAG
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mRNA from alignment at P-wetherbeei_contig13600:1473..1814+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13600.2.1 ID=mRNA_P-wetherbeei_contig13600.2.1|Name=mRNA_P-wetherbeei_contig13600.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig13600:1473..1814+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGGCGCTGTTCTGGCTGCTGGCCGTATTCGCGGGCGCGGTGGCCCT GGCGATCATCGGGCGCGGAAACGACGGGTACGCGTTGTTCGTCTATCCGC CATGGCGCGTCGAGGTTTCCCTGATCTTCTTCATCGTGCTGGCGGCGGGG CTCTTCGCCGTGCTCTATTTCTTCGCCCGCCTTGTCGACCACGCCCTCAA CCTGCCGCTGCACGTGCGCGCCTACCGCGAACGCCGCCGGGCCGAGAAGG CGCGCGATGCGCTGCTGGGCTCCGCGCAGGCCTACCTGGAAGGGCGCTTC GCGCGCGCCGAGAGCGATGCGCGCCGGGCCTGGGTGGCGGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13600:1473..1814+

>mRNA_P-wetherbeei_contig13600.2.1 ID=mRNA_P-wetherbeei_contig13600.2.1|Name=mRNA_P-wetherbeei_contig13600.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig13600:1473..1814+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGGCGCTGTTCTGGCTGCTGGCCGTATTCGCGGGCGCGGTGGCCCT
GGCGATCATCGGGCGCGGAAACGACGGGTACGCGTTGTTCGTCTATCCGC
CATGGCGCGTCGAGGTTTCCCTGATCTTCTTCATCGTGCTGGCGGCGGGG
CTCTTCGCCGTGCTCTATTTCTTCGCCCGCCTTGTCGACCACGCCCTCAA
CCTGCCGCTGCACGTGCGCGCCTACCGCGAACGCCGCCGGGCCGAGAAGG
CGCGCGATGCGCTGCTGGGCTCCGCGCAGGCCTACCTGGAAGGGCGCTTC
GCGCGCGCCGAGAGCGATGCGCGCCGGGCCTGGGTGGCGGGC
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