mRNA_P-wetherbeei_contig13562.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13562.1.1
Unique NamemRNA_P-wetherbeei_contig13562.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A2E4NIJ2_9PROT (Acyl dehydratase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4NIJ2_9PROT)

HSP 1 Score: 235 bits (600), Expect = 2.700e-77
Identity = 114/154 (74.03%), Postives = 132/154 (85.71%), Query Frame = 1
Query:    1 EIMRTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGEGHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGRPK 462
            E M+TVG+GFYWDDLK G++FRTLNRTITE DIV FI VTGM+ET+FTDLS  E HGAI+GRV P AL YTI+EGLLCQ+TMQTTGLALLEV KK+  PV AGDT+HGEV V + + TSKG RG+V T+N +VNQKG+TV+TYRAVRMMAGRPK
Sbjct:    3 EDMKTVGVGFYWDDLKKGDQFRTLNRTITETDIVNFISVTGMLETIFTDLSXSENHGAIQGRVVPAALSYTIVEGLLCQSTMQTTGLALLEVTKKVRAPVFAGDTVHGEVTVESSRETSKGGRGIVITNNEIVNQKGETVITYRAVRMMAGRPK 156          
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A2D7FHT5_9HYPH (MaoC-like domain-containing protein n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FHT5_9HYPH)

HSP 1 Score: 237 bits (605), Expect = 3.800e-77
Identity = 117/151 (77.48%), Postives = 132/151 (87.42%), Query Frame = 1
Query:    7 MRTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGEGHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGRP 459
            ++TVGIGFYWDDL  G KFRTLNRTITEAD+VQFIGVTGMVET+FTDLSF + HGAI+GRV P A  YTIIEGLL Q+TMQTTGLALLEV KKIL PV AGDT+H EVEV+ ++PTSKGNRG+VTT NN+VNQ G TV+ Y+AVRMMAGRP
Sbjct:   65 VKTVGIGFYWDDLTEGYKFRTLNRTITEADLVQFIGVTGMVETIFTDLSFNDHHGAIQGRVVPAACTYTIIEGLLVQSTMQTTGLALLEVEKKILKPVFAGDTVHAEVEVLNVRPTSKGNRGIVTTMNNIVNQDGVTVIAYKAVRMMAGRP 215          
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A2E6Q475_9PROT (Acyl dehydratase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6Q475_9PROT)

HSP 1 Score: 231 bits (589), Expect = 1.460e-75
Identity = 113/151 (74.83%), Postives = 130/151 (86.09%), Query Frame = 1
Query:   10 RTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGEGHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGRPK 462
            +TVGIGFYWDDLK G+ F+TLNRTITE DIV FI VTGM+ET+FTDLSF E HGAI+GRV P AL YTIIEGLLCQ+TMQTTGLALLEV KK+  PV AGDT+HG V V + + TSKG RG+V T+N++VNQKG+TV+TYRAVRMMAGRPK
Sbjct:    8 KTVGIGFYWDDLKEGDTFKTLNRTITETDIVNFISVTGMLETIFTDLSFSEHHGAIQGRVVPAALSYTIIEGLLCQSTMQTTGLALLEVTKKVKAPVFAGDTVHGVVNVESSRETSKGGRGIVITNNDIVNQKGETVITYRAVRMMAGRPK 158          
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A353Y163_9BURK (Acyl dehydratase (Fragment) n=1 Tax=Curvibacter sp. TaxID=1888168 RepID=A0A353Y163_9BURK)

HSP 1 Score: 225 bits (573), Expect = 3.170e-73
Identity = 110/152 (72.37%), Postives = 132/152 (86.84%), Query Frame = 1
Query:    7 MRTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGE-GHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGRP 459
            M+T+G+G YWD+L+ GE+F+TLNRT+TE DIV FIGVTGMVETLFTDL+FGE G G +RGRV+P ALVYT+ EGLL Q+TMQTTGLALLEV KK+L PV AGDTIH EVEV++++PT KGNRG+VTT NNV NQ+G  V+ YRAVRMMAG+P
Sbjct:    1 MKTLGVGLYWDNLEVGEQFKTLNRTVTEPDIVNFIGVTGMVETLFTDLTFGEHGGGPMRGRVAPAALVYTLTEGLLVQSTMQTTGLALLEVEKKVLAPVFAGDTIHAEVEVLSVRPTKKGNRGIVTTMNNVKNQEGVRVIEYRAVRMMAGKP 152          
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A520NXF5_9PROT (Acyl dehydratase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NXF5_9PROT)

HSP 1 Score: 222 bits (566), Expect = 3.810e-72
Identity = 111/152 (73.03%), Postives = 131/152 (86.18%), Query Frame = 1
Query:    7 MRTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGE-GHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGRP 459
            M+T+GIG YWD+L+ GE+F TL RT+TEADIV FIGVTGMVETLFTDL+FG+ G G + GRV+P ALVYT+ EGLL Q+TMQTTGLALLEV KK+L PV AGDTI+ EVEV+A++ TSKGNRG+VTT NNV+NQKGD V+ YRAVRMMAG P
Sbjct:    1 MKTLGIGLYWDNLEVGEQFMTLKRTVTEADIVNFIGVTGMVETLFTDLTFGDHGGGPMSGRVAPAALVYTMTEGLLVQSTMQTTGLALLEVEKKVLAPVFAGDTIYAEVEVMAVRATSKGNRGIVTTMNNVMNQKGDKVIEYRAVRMMAGSP 152          
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A2S6Q6D9_9PROT (MaoC-like domain-containing protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q6D9_9PROT)

HSP 1 Score: 221 bits (564), Expect = 7.440e-72
Identity = 108/152 (71.05%), Postives = 131/152 (86.18%), Query Frame = 1
Query:    7 MRTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGE-GHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGRP 459
            M+T+G+G YWD+L+ GE+F+TLNRT+TE DIV FIGVTGMVETLFTDL+FG+ G G + GRV+P ALVYT+IEGLL Q+TMQTTGLALLE+ K++L PV AGDTIH EVEV+ ++PTSKG RG+VTT NNV+NQ G  V+ YRAVRMMAGRP
Sbjct:    1 MKTLGLGLYWDNLEVGEQFKTLNRTVTEPDIVNFIGVTGMVETLFTDLTFGDHGGGPMGGRVAPAALVYTLIEGLLVQSTMQTTGLALLEIEKRVLGPVFAGDTIHAEVEVLTVRPTSKGGRGIVTTMNNVINQDGAKVIEYRAVRMMAGRP 152          
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A2D9JP17_9GAMM (Acyl dehydratase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9JP17_9GAMM)

HSP 1 Score: 220 bits (561), Expect = 2.970e-71
Identity = 111/152 (73.03%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    7 MRTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGEGHGAIR-GRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGRP 459
            MRTVG GFYWD+L  GEKF+TLNRTIT+ADIV FIGVTGMVET+FTDLSF E HGA   GRV+P AL YTIIEGLLCQ+TMQTTGLALLEV KKIL PV AGDT+H  VEV++ + T+KG RG+VTT N++VNQ GDTV+ Y+A RMM G P
Sbjct:    1 MRTVGRGFYWDELTVGEKFKTLNRTITDADIVNFIGVTGMVETIFTDLSFDEHHGAAMVGRVAPAALTYTIIEGLLCQSTMQTTGLALLEVEKKILKPVKAGDTVHCVVEVLSTRETTKGGRGIVTTGNSIVNQDGDTVIYYKATRMMRGNP 152          
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A2E3S320_9PROT (Acyl dehydratase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3S320_9PROT)

HSP 1 Score: 218 bits (556), Expect = 1.400e-70
Identity = 106/151 (70.20%), Postives = 128/151 (84.77%), Query Frame = 1
Query:   10 RTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGEGHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGRPK 462
            + VGIGFYWDDLK+G+ F+TLNRTITE DIV FI VTGM+ET+FTDLSF E HGAI+GRV P AL YT+IEG+LCQ+TMQTTGLALLEV KKI  PV AGDTIH  V V + + TS+G RG+V T+N+++NQK +TV++YRAVRMMAGRP+
Sbjct:    8 KVVGIGFYWDDLKSGDTFKTLNRTITETDIVNFISVTGMLETVFTDLSFSEEHGAIKGRVVPAALSYTLIEGILCQSTMQTTGLALLEVTKKIKAPVFAGDTIHCVVSVESSRETSRGGRGIVITNNDIINQKDETVISYRAVRMMAGRPE 158          
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A2D8G523_9PROT (Acyl dehydratase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G523_9PROT)

HSP 1 Score: 212 bits (540), Expect = 3.360e-68
Identity = 105/150 (70.00%), Postives = 126/150 (84.00%), Query Frame = 1
Query:    7 MRTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGE-GHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAG 453
            M+T+GIG +WD+L+ GE+FRTL RT+TE D V FIGVTGMVETLFT L+FG+ G G + GRV+P ALVYT+ EG L Q+TMQTTGLALLEV KK+L PV AGDTIH EVEV++++PT KGNRG+VTT NNV+NQK D V+ YRAVRMMAG
Sbjct:    1 MKTLGIGLFWDNLEVGEQFRTLKRTVTEXDXVNFIGVTGMVETLFTXLTFGDHGGGPMGGRVAPAALVYTLTEGXLVQSTMQTTGLALLEVEKKVLAPVFAGDTIHAEVEVMSVRPTRKGNRGIVTTMNNVLNQKSDKVIEYRAVRMMAG 150          
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Match: A0A1T4JM78_9HYPH (Acyl dehydratase n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1T4JM78_9HYPH)

HSP 1 Score: 201 bits (512), Expect = 5.570e-64
Identity = 97/150 (64.67%), Postives = 117/150 (78.00%), Query Frame = 1
Query:    7 MRTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSFGEGHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLAGDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGR 456
            M  VG+G +W DLK G+KFRT+NRTITEAD+V FI  TGMVE +FTD++F E HGA+RGR  PGAL Y  +EGLL QATMQ TGLA+LE   K+  P   GDTIHGEVEV A++PTSKGNRG+VTT N++VNQ+ + V+TY   RMMAGR
Sbjct:    1 MEYVGLGLFWTDLKVGQKFRTINRTITEADLVNFINATGMVEMIFTDVTFSEQHGAMRGRPVPGALCYCFVEGLLVQATMQHTGLAMLESTIKVHAPTNVGDTIHGEVEVTAVRPTSKGNRGIVTTINSIVNQRNEVVITYNVTRMMAGR 150          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13562.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E4NIJ2_9PROT2.700e-7774.03Acyl dehydratase n=1 Tax=Rhodospirillaceae bacteri... [more]
A0A2D7FHT5_9HYPH3.800e-7777.48MaoC-like domain-containing protein n=2 Tax=Hyphom... [more]
A0A2E6Q475_9PROT1.460e-7574.83Acyl dehydratase n=2 Tax=Rhodospirillaceae bacteri... [more]
A0A353Y163_9BURK3.170e-7372.37Acyl dehydratase (Fragment) n=1 Tax=Curvibacter sp... [more]
A0A520NXF5_9PROT3.810e-7273.03Acyl dehydratase n=2 Tax=Rhodospirillaceae bacteri... [more]
A0A2S6Q6D9_9PROT7.440e-7271.05MaoC-like domain-containing protein n=1 Tax=Alphap... [more]
A0A2D9JP17_9GAMM2.970e-7173.03Acyl dehydratase n=1 Tax=Gammaproteobacteria bacte... [more]
A0A2E3S320_9PROT1.400e-7070.20Acyl dehydratase n=1 Tax=Rhodospirillaceae bacteri... [more]
A0A2D8G523_9PROT3.360e-6870.00Acyl dehydratase n=1 Tax=Alphaproteobacteria bacte... [more]
A0A1T4JM78_9HYPH5.570e-6464.67Acyl dehydratase n=6 Tax=Alphaproteobacteria TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13562contigP-wetherbeei_contig13562:182..646 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog94624.Bpet3306
PFAMsMaoC_dehydrat_N,MaoC_dehydratas
Model size465
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.18e-56
EggNOG OGsCOG2030@1|root,COG2030@2|Bacteria,1RFQ0@1224|Proteobacteria,2VR3Q@28216|Betaproteobacteria,3T400@506|Alcaligenaceae
DescriptionMaoC like domain
Cds size459
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185990.5819016-CDS-P-wetherbeei_contig13562:181..6401683185990.5819016-CDS-P-wetherbeei_contig13562:181..640Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13562 182..640 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185990.5925748-UTR-P-wetherbeei_contig13562:640..6461683185990.5925748-UTR-P-wetherbeei_contig13562:640..646Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13562 641..646 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13562.1.1prot_P-wetherbeei_contig13562.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13562 182..640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13562.1.1

>prot_P-wetherbeei_contig13562.1.1 ID=prot_P-wetherbeei_contig13562.1.1|Name=mRNA_P-wetherbeei_contig13562.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp
MRTVGIGFYWDDLKAGEKFRTLNRTITEADIVQFIGVTGMVETLFTDLSF
GEGHGAIRGRVSPGALVYTIIEGLLCQATMQTTGLALLEVHKKILLPVLA
GDTIHGEVEVVAIKPTSKGNRGVVTTDNNVVNQKGDTVMTYRAVRMMAGR
PK*
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mRNA from alignment at P-wetherbeei_contig13562:182..646-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13562.1.1 ID=mRNA_P-wetherbeei_contig13562.1.1|Name=mRNA_P-wetherbeei_contig13562.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig13562:182..646- (Phaeothamnion wetherbeei SAG_119_79)
GAGATCATGCGAACGGTCGGCATAGGATTCTACTGGGACGACCTGAAGGC CGGTGAGAAATTCCGCACGCTCAATCGAACGATCACGGAAGCGGACATCG TACAGTTCATCGGCGTCACCGGCATGGTGGAAACGCTGTTCACCGACCTG TCATTCGGCGAAGGCCATGGCGCAATACGGGGCCGCGTTTCGCCGGGCGC GCTCGTCTATACGATCATCGAAGGCTTGTTGTGCCAGGCGACGATGCAGA CGACGGGACTTGCACTGCTGGAAGTTCACAAGAAGATCCTGCTGCCCGTC CTGGCCGGCGACACCATTCATGGTGAGGTCGAGGTGGTCGCGATCAAGCC GACCTCGAAAGGCAATCGCGGTGTCGTGACGACGGACAACAATGTCGTAA ATCAGAAGGGCGATACGGTGATGACGTATCGCGCAGTTCGCATGATGGCC GGGCGGCCCAAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13562:182..646-

>mRNA_P-wetherbeei_contig13562.1.1 ID=mRNA_P-wetherbeei_contig13562.1.1|Name=mRNA_P-wetherbeei_contig13562.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig13562:182..646- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGAACGGTCGGCATAGGATTCTACTGGGACGACCTGAAGGCCGGTGA
GAAATTCCGCACGCTCAATCGAACGATCACGGAAGCGGACATCGTACAGT
TCATCGGCGTCACCGGCATGGTGGAAACGCTGTTCACCGACCTGTCATTC
GGCGAAGGCCATGGCGCAATACGGGGCCGCGTTTCGCCGGGCGCGCTCGT
CTATACGATCATCGAAGGCTTGTTGTGCCAGGCGACGATGCAGACGACGG
GACTTGCACTGCTGGAAGTTCACAAGAAGATCCTGCTGCCCGTCCTGGCC
GGCGACACCATTCATGGTGAGGTCGAGGTGGTCGCGATCAAGCCGACCTC
GAAAGGCAATCGCGGTGTCGTGACGACGGACAACAATGTCGTAAATCAGA
AGGGCGATACGGTGATGACGTATCGCGCAGTTCGCATGATGGCCGGGCGG
CCCAAGTGA
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