mRNA_P-wetherbeei_contig1356.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: UPI001C235887 (ATP-binding protein n=1 Tax=Reyranella sp. MMS21-HV4-11 TaxID=2849149 RepID=UPI001C235887) HSP 1 Score: 93.2 bits (230), Expect = 1.000e-16 Identity = 66/165 (40.00%), Postives = 79/165 (47.88%), Query Frame = 1
Query: 211 RMLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECLDAALENRTRVIA 705
R+LVVDD S NRRILA QLEL G D+A GGAEA M A YD +L DL MP MDG ++A R + AA GR R I+ +TAS L + R +AAG+DGF+TKPV +L LD L R A
Sbjct: 586 RVLVVDDNSVNRRILARQLELAGASTDVAAGGAEAFEMLRARR--YDLVLADLQMPDMDGFEMAR----RIRAGEAAD-------------------------------GRARLPILAITASTLEDEEQRSRAAGMDGFITKPVGIEQLRATLDVWLPEAARERA 713
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: UPI0019C47BB8 (Response regulator n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019C47BB8) HSP 1 Score: 87.8 bits (216), Expect = 4.190e-16 Identity = 57/165 (34.55%), Postives = 80/165 (48.48%), Query Frame = 1
Query: 211 RMLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECLDAALENRTRVIA 705
R+LVVDD ANRR+ L GH +++A G EAV E A YD +L+D+ MPG++G++ A I +R +GA P+ II VTA+ LP DR RC+AAG+D +VTKP+ L + + R+IA
Sbjct: 5 RVLVVDDVDANRRLAQAMLRRFGHLSEVATSGLEAV--EKAVAGHYDIVLMDIQMPGINGIEAARRIRER---------------LGALPR------------------------IIAVTANDLPGDRERCRAAGMDTYVTKPIQLEALRAAIQQPVPGAERLIA 128
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: A0A259MT10_9PROT (Histidine kinase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A259MT10_9PROT) HSP 1 Score: 90.9 bits (224), Expect = 5.710e-16 Identity = 65/165 (39.39%), Postives = 82/165 (49.70%), Query Frame = 1
Query: 211 RMLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECLDAALENRTRVIA 705
R+LVVDD S NR+ILA QLEL G ADMA GG EA+ M YD +L DL MP MDG ++A I +G A+ G R I+ VTAS L S+ R +AAG+DGF+TKPV +L L+ L++ R A
Sbjct: 582 RVLVVDDNSVNRKILARQLELAGTSADMAAGGEEALAMWRTRS--YDLMLADLQMPDMDGFELARRI---RQGEAST--------------------------------GSARLPILAVTASTLESEEERSRAAGMDGFITKPVGIEQLKATLEVWLKDACRQNA 709
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: UPI0010C083D2 (PAS-domain containing protein n=1 Tax=Roseomonas sp. AR75 TaxID=2562311 RepID=UPI0010C083D2) HSP 1 Score: 88.6 bits (218), Expect = 4.110e-15 Identity = 63/158 (39.87%), Postives = 81/158 (51.27%), Query Frame = 1
Query: 211 RMLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECLDAALE 684
R+LVVDD NR +LA QLELLG ADMA GA+A+ + AA + L+DLHMP MDG+D+A I R + AA + G R AII VTA+AL + RC AAG+DGF+ KP+ +L L L+
Sbjct: 930 RLLVVDDHPVNREVLARQLELLGFQADMAEDGAQALALWRAAR--HRLALVDLHMPVMDGLDLARAI--RREEAA--------------------------------QPGAARTAIIAVTANALKGEDERCYAAGMDGFLPKPLAMDQLARALSQHLQ 1051
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: UPI0019F7F5C8 (Response regulator n=1 Tax=Thermosynechococcus sp. M46_R2017_013 TaxID=2747807 RepID=UPI0019F7F5C8) HSP 1 Score: 82.0 bits (201), Expect = 5.640e-15 Identity = 49/153 (32.03%), Postives = 73/153 (47.71%), Query Frame = 1
Query: 211 RMLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECL 669
R+LV +D N+ + LE LG+ D+A G E ++A PYD IL+D+ MP MDG+ E++D ++ R + RP II +TA+A+ SDR C+ AG+D +V+KP+N LV L
Sbjct: 22 RILVAEDNKVNQMVALRILEKLGYRGDIAANGLEV--LDAVQRQPYDVILMDMQMPEMDGLTATREVIDLFQ-----------------------------------RLNQPRPRIIAMTANAMESDRQLCRNAGMDDYVSKPINLEDLVRAL 137
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: A0A536DP04_9CHLR (Response regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536DP04_9CHLR) HSP 1 Score: 83.2 bits (204), Expect = 8.050e-15 Identity = 53/156 (33.97%), Postives = 72/156 (46.15%), Query Frame = 1
Query: 211 RMLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECLDAA 678
++LV DD + N+ +L Q+ LGH D+ G EAV A + PYD +L+D+ MPGMDG+ A EI R+ A RP +I +TA A P D RC AG D +++KPV+ L E L AA
Sbjct: 85 KVLVADDNTLNQNMLRRQITKLGHTVDIVSNGREAV--SAVEQQPYDALLMDVLMPGMDGLQAAEEICRRWSRGA-------------------------------------RPRLIALTAMAGPGDEERCLKAGFDDYMSKPVHMDELGEALKAA 201
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: A0A831YJA7_9PROT (Histidine kinase n=1 Tax=Caulobacterales bacterium TaxID=2282150 RepID=A0A831YJA7_9PROT) HSP 1 Score: 87.0 bits (214), Expect = 9.110e-15 Identity = 63/168 (37.50%), Postives = 83/168 (49.40%), Query Frame = 1
Query: 205 RCRMLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECLDAALENRTRVIAT 708
+ +ML+VDD + NR +L L +G +A G EAV M A P+D IL+D+HMPGMDG++ I R + AA +GRR R I+ VTAS L + R AAG+DGFV KP+ +RLV LDAAL +AT
Sbjct: 467 KLKMLIVDDNATNRTVLQAMLGHMGVACGVARDGHEAVAMWDAG--PWDAILMDIHMPGMDGLEAGRVI--RAREAA-----------------------------EGRR----RTPILAVTASVLTHETNRYLAAGMDGFVAKPIAAQRLVAALDAALSGPAADVAT 597
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: UPI000694004A (PAS domain-containing protein n=1 Tax=Polycyclovorans algicola TaxID=616992 RepID=UPI000694004A) HSP 1 Score: 87.4 bits (215), Expect = 9.850e-15 Identity = 57/162 (35.19%), Postives = 77/162 (47.53%), Query Frame = 1
Query: 193 GGVRRCRMLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECLDAA 678
GG+R R+L+ +D + N+++ LE LGHHAD+A G EAV +A PYD +L+D+ MP MDG EI RR P II VTA+AL D RC+ AG+D +++KP+N R L LD A
Sbjct: 950 GGIR-LRVLIAEDNTVNQKVALKFLERLGHHADIASNGQEAV--DAVLRQPYDVVLMDVQMPVMDGFAATREI---------------------------------------RRVLAAGPRIIAVTANALAGDEQRCREAGMDDYLSKPLNPRALAVALDRA 1069
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: A0A3M2G4X4_9BACT (Response regulator n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A3M2G4X4_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 1.320e-14 Identity = 48/153 (31.37%), Postives = 77/153 (50.33%), Query Frame = 1
Query: 214 MLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECLD 672
+L+ +D + N+R++ LE +G+ AD+AG G E +EA PYD I +D+ MP MDG++ I+++Y P+ R P II +TA+A+ DR RC AAG+D +++KP+ LV+ L+
Sbjct: 3 ILLAEDNAVNQRLVQRMLEKMGYRADVAGNGIEV--LEALQRQPYDLIFMDMQMPEMDGLETTKRILEQYP-----------------PENR--------------------PHIIAMTANAMQGDRERCLAAGMDDYLSKPIQLMELVQVLE 116
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Match: UPI001B1C28D5 (Response regulator n=1 Tax=Caulobacter sp. TaxID=78 RepID=UPI001B1C28D5) HSP 1 Score: 86.3 bits (212), Expect = 1.630e-14 Identity = 61/157 (38.85%), Postives = 77/157 (49.04%), Query Frame = 1
Query: 211 RMLVVDDTSANRRILAHQLELLGHHADMAGGGAEAVRMEAAAEPPYDCILLDLHMPGMDGVDVANEIVDRYKGAAAAIGVGGGGSIGATPQTRTTPWAATTAPGQGRRAGRLRPAIIVVTASALPSDRARCQAAGVDGFVTKPVNKRRLVECLDAAL 681
+MLVVDD + NR +L L LG +A G EAV M + P+D IL+D+HMPGMDG++ I R + AA GR R I+ VTAS L + R AAG+DGFV KP+ +RLVE LD AL
Sbjct: 469 KMLVVDDNATNRTVLQAMLGHLGVACGIARDGHEAVAMWESG--PWDAILMDIHMPGMDGLEAGRVI--RTREAAE---------------------------------GRTRTPILAVTASVLSHETERYMAAGMDGFVAKPIAAQRLVEALDVAL 588 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1356.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1356.1.1 >prot_P-wetherbeei_contig1356.1.1 ID=prot_P-wetherbeei_contig1356.1.1|Name=mRNA_P-wetherbeei_contig1356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp CDSPTAAIAGSHVAPAHGKFSGRECGDGGGSDRGGSNRGGSLVGSFGSRPback to top mRNA from alignment at P-wetherbeei_contig1356:109..1602+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1356.1.1 ID=mRNA_P-wetherbeei_contig1356.1.1|Name=mRNA_P-wetherbeei_contig1356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1494bp|location=Sequence derived from alignment at P-wetherbeei_contig1356:109..1602+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1356:109..1602+ >mRNA_P-wetherbeei_contig1356.1.1 ID=mRNA_P-wetherbeei_contig1356.1.1|Name=mRNA_P-wetherbeei_contig1356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig1356:109..1602+ (Phaeothamnion wetherbeei SAG_119_79)back to top |