mRNA_P-wetherbeei_contig13557.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13557.1.1
Unique NamemRNA_P-wetherbeei_contig13557.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A1F4D8G7_9PROT (Pseudouridine synthase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4D8G7_9PROT)

HSP 1 Score: 314 bits (805), Expect = 8.210e-105
Identity = 156/240 (65.00%), Postives = 186/240 (77.50%), Query Frame = 1
Query:   52 TQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWL 771
            +QKL KVLAQSGLGSRR ME  I  G+VTVNG VA IG RV P D ++V    VR  +  RLPRVL+YHKPEGEIASRDDP+GRP+VF +LP L GAKW+++GRLD+NTCGLL+FTTSGELANRMMHP F +EREYAVR +G+L  E V +L  G+ LDDG+ARC  V+  GGEGAN W  +VL EGRNR+VRR+FE LG  VSRL+RVR+G + LP R+KR Q  EL  EE  RL++WL
Sbjct:   12 SQKLHKVLAQSGLGSRRAMEQWIRDGRVTVNGIVAGIGTRVTPRDLVRVDKHEVRWPAPRRLPRVLIYHKPEGEIASRDDPQGRPTVFAKLPRLRGAKWLAVGRLDYNTCGLLIFTTSGELANRMMHPSFAVEREYAVRTLGRLSPEQVAKLKSGIMLDDGIARCSAVEDEGGEGANHWYRIVLAEGRNRVVRRMFEALGLTVSRLLRVRFGIISLPPRLKRGQLNELAPEEVARLMEWL 251          
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A0S8CAM8_9PROT (Pseudouridine synthase n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8CAM8_9PROT)

HSP 1 Score: 313 bits (801), Expect = 4.840e-104
Identity = 156/246 (63.41%), Postives = 191/246 (77.64%), Query Frame = 1
Query:   37 SAPEATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWLD 774
            S P+ TQKLQKVLA +GLGSRR+ME L+  G+V+VNG  A IG RVGP D IKV G+IVR     RLPRVLLY+KPEGEI SR DP GRPSVF+RLP + GAKW++IGRLDFNT GLL+ TTSGELANRMMHPR+ +EREYAVRV+G L  E + +L  GV LDDGVARC+ +   GGEGAN W H+V++EGR R+VRR+F  +G  VSRL+RVR+G V LP +++R  + EL  +ET+RLL  L+
Sbjct:   18 SGPQGTQKLQKVLADAGLGSRREMEALVQAGQVSVNGSPARIGTRVGPHDLIKVKGKIVRRSLQQRLPRVLLYYKPEGEIVSRADPAGRPSVFDRLPPVRGAKWLTIGRLDFNTSGLLILTTSGELANRMMHPRYALEREYAVRVLGHLRAEELARLAAGVRLDDGVARCDSIQDAGGEGANHWYHLVIREGRKRVVRRMFAAVGHAVSRLIRVRFGSVTLPRQLRRGHFLELAPQETRRLLASLE 263          
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A1F4BGF9_9PROT (Pseudouridine synthase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BGF9_9PROT)

HSP 1 Score: 311 bits (798), Expect = 2.000e-103
Identity = 155/241 (64.32%), Postives = 190/241 (78.84%), Query Frame = 1
Query:   49 ATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWL 771
            AT KLQK LAQ+GLGSRR+ME  I  G+VTVNG  A +GARVG  D + V GRI+R+ +  RLP+VL+YHKPEGEIASRDDP GRPSVF++LP L  AKW+++GRLDFN+ GLL+FTTSGELANRMMHP  E++REYAVRV G+L +E   +L+ G+ L+DG+ARCE V   GGEGAN+W  VVL+EGRNRIVRRLF+ LG  +SRLMRVR+GPV LP R++R Q  EL   E ++LL  L
Sbjct:   12 ATYKLQKALAQAGLGSRREMEQWIQAGRVTVNGVKARLGARVGAQDVVMVDGRILRSAAPERLPQVLIYHKPEGEIASRDDPAGRPSVFDKLPRLRDAKWVAVGRLDFNSSGLLLFTTSGELANRMMHPSHELDREYAVRVRGRLTEEQGARLLSGIRLEDGMARCESVSTEGGEGANRWYRVVLREGRNRIVRRLFDALGLSISRLMRVRFGPVVLPPRLRRGQILELAPAEVRQLLTTL 252          
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A1H3LQ28_9PROT (Pseudouridine synthase n=2 Tax=Nitrosomonas sp. Nm33 TaxID=133724 RepID=A0A1H3LQ28_9PROT)

HSP 1 Score: 309 bits (792), Expect = 1.290e-102
Identity = 149/245 (60.82%), Postives = 195/245 (79.59%), Query Frame = 1
Query:   40 APEATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWLD 774
            AP  T KLQK+LAQSGLGSRR+ME LI+ G+V++NG VA +G RVG  D ++V+ RI+R +   RLPR++LYHKPEGEI SR DP GRPSVF++LP L  ++WI+IGRLDFNT GLL+FTT+G LANR+MHPRF++EREYAVR++G+L  E   QL+ GVEL+DG+A+   +  +GGEGAN+W HV+LKEGRNR VRRLFE LG  VSRL+R+R+GP+ LP R+KR  +++L   ET  LL+ ++
Sbjct:   10 APMVTHKLQKLLAQSGLGSRREMEALIASGQVSINGKVAKLGDRVGSRDLVRVNRRIIRININERLPRIILYHKPEGEIVSRHDPEGRPSVFDKLPQLKSSRWIAIGRLDFNTSGLLIFTTNGVLANRLMHPRFQVEREYAVRIVGRLTPEQKSQLLTGVELEDGLAKFSDLSEQGGEGANRWYHVILKEGRNREVRRLFEALGLTVSRLIRIRFGPIHLPPRLKRGMWHQLDENETAYLLELVN 254          
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A8I1PUD6_9PROT (Pseudouridine synthase n=1 Tax=Nitrosospira sp. TaxID=38080 RepID=A0A8I1PUD6_9PROT)

HSP 1 Score: 310 bits (794), Expect = 2.370e-102
Identity = 149/245 (60.82%), Postives = 196/245 (80.00%), Query Frame = 1
Query:   49 ATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDWLDAAQ 783
            AT KLQK+LAQ+GLGSRR+ME LI+ G+ T+NG +A IG RVGP D +++  R++    +  LPRV++YHKPEGEI SRDDP+GRPSVF+RLP L  +KWI+IGRLD+NT GLL+FTT+GELANR+MHPRFE+EREYAVR++G+L  E V++L  G+EL+DG+AR +++  +GGEG+N W  VVLKEGRNR VRR+FE +G  VSRLMRVR+GP+ LP R+KR ++ EL   E +RLL  ++  Q
Sbjct:   65 ATHKLQKLLAQAGLGSRREMEELIAAGQATINGKIAKIGDRVGPEDVVRLGKRVIHFRRSGTLPRVMIYHKPEGEIVSRDDPQGRPSVFDRLPQLRSSKWIAIGRLDYNTSGLLIFTTNGELANRLMHPRFEVEREYAVRIIGRLTPEAVERLTAGIELEDGLARFDQLSDQGGEGSNHWYRVVLKEGRNREVRRMFESVGMAVSRLMRVRFGPINLPPRLKRGKWMELDEVEARRLLALVEGNQ 309          
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: UPI001BC197BD (Pseudouridine synthase n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BC197BD)

HSP 1 Score: 310 bits (794), Expect = 6.790e-102
Identity = 149/241 (61.83%), Postives = 190/241 (78.84%), Query Frame = 1
Query:   46 EATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDW 768
            + T KLQKVLAQ+GLGSRRDME LI  G+VTVNG VA +G RV   D I+ +GRI+R  S  RLPRV+LYHKPEGEI SRDDP GR SVFER+P L  + W+S+GRLDFNT GLL+FTTSGELANR+ HPRFE+EREYAVR++G++  E + +L  G+EL+DG+A+ + +  +GGEG+N W  V+++EGRNR VRRLFE +G +VSRLMRVR+G + LP+R+KR Q+ EL  EE  ++L W
Sbjct:   53 DGTSKLQKVLAQAGLGSRRDMEELIKSGRVTVNGQVAELGMRVTSEDSIRANGRILRLRSADRLPRVMLYHKPEGEIVSRDDPEGRTSVFERIPILASSWWVSVGRLDFNTSGLLIFTTSGELANRLTHPRFEVEREYAVRLLGEMSTEQIAKLKAGIELEDGLAKFDAIMEQGGEGSNHWYRVIIREGRNREVRRLFEAVGMMVSRLMRVRFGAINLPTRLKRGQWVELGSEEVVQILKW 293          
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: UPI00199AB792 (Pseudouridine synthase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI00199AB792)

HSP 1 Score: 308 bits (789), Expect = 1.150e-101
Identity = 154/239 (64.44%), Postives = 187/239 (78.24%), Query Frame = 1
Query:   52 TQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDW 768
            +QKL K+LAQ+GLGSRR+ME LI  G+V+VNG  A +G RV   D ++V  RIVR  S  RLPRVLLYHKPE EI SRDDP GR SVF++LP + GAKWI+IGRLD+N+CGLLMFTTSGELANR MHPRFE+EREYAVR++G+L  EH +QL+ GV+L+DG A+   +  +GGE  N+W HVVL+EGR R+VRR+FE LGF VSRLMRVR+GPV LP R+KR    EL  +E Q LL W
Sbjct:   15 SQKLHKLLAQAGLGSRREMETLIVAGRVSVNGKPAGVGERVSGGDVVRVDKRIVRFKSAHRLPRVLLYHKPENEIVSRDDPEGRASVFDKLPPIRGAKWIAIGRLDYNSCGLLMFTTSGELANRFMHPRFEVEREYAVRIVGELAPEHFRQLLGGVQLEDGEAKFASLFEQGGEATNRWYHVVLQEGRKRVVRRMFEALGFTVSRLMRVRFGPVVLPPRLKRCALRELETQEVQELLVW 253          
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A0F7KIN1_9PROT (Pseudouridine synthase n=3 Tax=Nitrosomonas TaxID=914 RepID=A0A0F7KIN1_9PROT)

HSP 1 Score: 307 bits (786), Expect = 1.620e-101
Identity = 148/237 (62.45%), Postives = 189/237 (79.75%), Query Frame = 1
Query:   52 TQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLL 762
            T KL K+LAQSGLGSRR+ME LI+ G+V++NG  A +G RVG  D ++V+ RI+R ++  RLPR++LYHKPEGEI SR DP GRPSVFE+LP L  ++W++IGRLDFNT GLL+FTT+G LANR+MHPRF++EREYAVR++G+L  E   QL+ GVEL+DG+A+   +  +GGEGAN+W HVVLKEGRNR VRRLFE LG  VSRL+RVR+GP+ LP R+KR  ++EL   ET  LL
Sbjct:   31 THKLHKLLAQSGLGSRREMEALIASGQVSINGKSAKLGDRVGARDLVRVNKRIIRLNTNERLPRIILYHKPEGEIVSRHDPEGRPSVFEKLPQLKSSRWVAIGRLDFNTSGLLIFTTNGVLANRLMHPRFQVEREYAVRIIGRLTPEQKSQLLMGVELEDGLAKLSDLSEQGGEGANRWYHVVLKEGRNREVRRLFEALGLTVSRLIRVRFGPIHLPPRLKRGMWHELDENETANLL 267          
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A286C6W4_9PROT (Pseudouridine synthase n=2 Tax=unclassified Nitrosovibrio TaxID=2624428 RepID=A0A286C6W4_9PROT)

HSP 1 Score: 307 bits (786), Expect = 2.430e-101
Identity = 151/245 (61.63%), Postives = 190/245 (77.55%), Query Frame = 1
Query:   31 PPSAPEATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLD 765
            P S P  TQKL K+LAQ+GLGSRR+ME LI+ G+ T+NG +A IG RVGP D ++V  R +   S+ RLPRV+LYHKPEGEI SRDDP+ RPSVF++LP L  +KWI+IGRLD+NT GLL+FTT GELANR+MHPRFE+EREYAVR+MG+L  E  ++L  GVEL+DG A+ + +   GGEG+N W  V+LKEGRNR VRR+FE +G  VSRLMRVR+GP+ LP R+KR ++ EL   E  RLL+
Sbjct:   48 PASPPAKTQKLHKLLAQAGLGSRREMEELIAAGQATINGKIANIGDRVGPEDIVRVGKRTIHLKSSGRLPRVMLYHKPEGEIVSRDDPQDRPSVFDKLPQLRSSKWIAIGRLDYNTSGLLIFTTDGELANRLMHPRFEVEREYAVRIMGRLTPEVAERLTTGVELEDGPAKFDYLSDEGGEGSNHWYRVILKEGRNREVRRMFETVGMTVSRLMRVRFGPINLPPRLKRGKWMELDETEITRLLE 292          
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Match: A0A7V9CJ14_9BURK (Pseudouridine synthase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V9CJ14_9BURK)

HSP 1 Score: 307 bits (787), Expect = 2.470e-101
Identity = 154/239 (64.44%), Postives = 186/239 (77.82%), Query Frame = 1
Query:   52 TQKLQKVLAQSGLGSRRDMELLISGGKVTVNGDVATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRGRPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIEREYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVVLKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEETQRLLDW 768
            TQKL K+LAQ+GLGSRR+ME LI+ G+V+VNG  A +G RV   D ++V  RIVR  S  RLPRVLLYHKPE EI SRDDP GR SVF+ LP + GAKWI+IGRLD+N+CGLLMFTTSGELAN  MHPRFE+EREYAVR++G+L  EH +QL+ GV+L+DG A+   +  +GGE  N+W HVVL+EGR R+VRR+FE LGF VSRLMRVR+GPV LP R+KR    EL  +E Q LL W
Sbjct:   15 TQKLHKLLAQAGLGSRREMETLIAAGRVSVNGKPAGVGERVSGEDTVRVDKRIVRFKSAHRLPRVLLYHKPENEIVSRDDPEGRASVFDNLPPIRGAKWIAIGRLDYNSCGLLMFTTSGELANLFMHPRFEVEREYAVRILGELTPEHFRQLLGGVQLEDGEAKFASLFEQGGEATNRWYHVVLQEGRKRLVRRMFEALGFTVSRLMRVRFGPVVLPPRLKRCALRELETQEVQELLVW 253          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13557.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4D8G7_9PROT8.210e-10565.00Pseudouridine synthase n=1 Tax=Betaproteobacteria ... [more]
A0A0S8CAM8_9PROT4.840e-10463.41Pseudouridine synthase n=1 Tax=Betaproteobacteria ... [more]
A0A1F4BGF9_9PROT2.000e-10364.32Pseudouridine synthase n=1 Tax=Betaproteobacteria ... [more]
A0A1H3LQ28_9PROT1.290e-10260.82Pseudouridine synthase n=2 Tax=Nitrosomonas sp. Nm... [more]
A0A8I1PUD6_9PROT2.370e-10260.82Pseudouridine synthase n=1 Tax=Nitrosospira sp. Ta... [more]
UPI001BC197BD6.790e-10261.83Pseudouridine synthase n=1 Tax=Sulfuricella sp. Ta... [more]
UPI00199AB7921.150e-10164.44Pseudouridine synthase n=1 Tax=Burkholderiales bac... [more]
A0A0F7KIN1_9PROT1.620e-10162.45Pseudouridine synthase n=3 Tax=Nitrosomonas TaxID=... [more]
A0A286C6W4_9PROT2.430e-10161.63Pseudouridine synthase n=2 Tax=unclassified Nitros... [more]
A0A7V9CJ14_9BURK2.470e-10164.44Pseudouridine synthase n=1 Tax=Burkholderiales bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13557contigP-wetherbeei_contig13557:254..1114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1266925.JHVX01000009_gene62
Preferred namerluB
PFAMsPseudoU_synth_2,S4
Model size861
Max annot lvl28216|Betaproteobacteria
KEGG koko:K06178
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.9e-106
EggNOG OGsCOG1187@1|root,COG1187@2|Bacteria,1MUCE@1224|Proteobacteria,2VITB@28216|Betaproteobacteria,372R2@32003|Nitrosomonadales
EC5.4.99.22
DescriptionBelongs to the pseudouridine synthase RsuA family
Cds size861
COG categoryJ
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185990.4307113-CDS-P-wetherbeei_contig13557:253..11141683185990.4307113-CDS-P-wetherbeei_contig13557:253..1114Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13557 254..1114 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13557.1.1prot_P-wetherbeei_contig13557.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13557 254..1114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13557.1.1

>prot_P-wetherbeei_contig13557.1.1 ID=prot_P-wetherbeei_contig13557.1.1|Name=mRNA_P-wetherbeei_contig13557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=287bp
AASRGGRRAAPPSAPEATQKLQKVLAQSGLGSRRDMELLISGGKVTVNGD
VATIGARVGPADQIKVSGRIVRAHSTSRLPRVLLYHKPEGEIASRDDPRG
RPSVFERLPALTGAKWISIGRLDFNTCGLLMFTTSGELANRMMHPRFEIE
REYAVRVMGKLMQEHVQQLMQGVELDDGVARCERVDLRGGEGANQWCHVV
LKEGRNRIVRRLFEKLGFIVSRLMRVRYGPVELPSRVKRNQYYELTGEET
QRLLDWLDAAQQPQPTEAPATPGQTPRREPGRRARE*
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mRNA from alignment at P-wetherbeei_contig13557:254..1114+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13557.1.1 ID=mRNA_P-wetherbeei_contig13557.1.1|Name=mRNA_P-wetherbeei_contig13557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig13557:254..1114+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCTCGCGCGGTGGCCGCCGTGCCGCGCCGCCATCGGCACCCGAAGC TACGCAAAAGCTGCAAAAAGTACTGGCGCAGTCCGGCCTCGGCTCGCGCC GCGACATGGAGCTGTTGATTAGTGGCGGCAAGGTCACGGTCAACGGCGAC GTCGCCACCATAGGCGCGCGCGTGGGCCCGGCCGACCAGATCAAGGTCTC CGGCCGTATCGTGCGTGCGCATTCCACGTCGCGGTTGCCGCGCGTGCTGC TGTATCACAAGCCGGAAGGCGAGATCGCCAGCCGCGACGATCCGCGCGGC CGGCCGAGCGTCTTCGAGCGCCTGCCGGCGTTGACCGGCGCCAAATGGAT ATCGATAGGGCGGCTCGACTTCAATACCTGCGGGCTCCTCATGTTCACGA CTTCAGGCGAACTCGCCAACCGCATGATGCATCCGCGTTTCGAAATCGAA CGCGAATACGCCGTGCGCGTGATGGGCAAGTTGATGCAGGAACATGTGCA GCAGCTGATGCAGGGCGTCGAGCTCGATGACGGGGTAGCGCGCTGCGAAA GGGTGGACCTGCGCGGTGGCGAGGGCGCCAATCAATGGTGCCACGTCGTG CTGAAGGAAGGACGCAATCGCATCGTGCGGCGGCTGTTCGAGAAGCTGGG CTTTATCGTGAGCCGGCTGATGCGCGTGCGCTACGGGCCGGTCGAACTGC CGTCGCGTGTTAAAAGAAACCAGTATTACGAGCTTACCGGCGAGGAGACG CAGCGCCTGCTCGACTGGCTCGACGCGGCGCAGCAGCCGCAGCCGACCGA GGCGCCCGCGACGCCGGGGCAGACGCCGCGGCGCGAGCCAGGTCGTCGCG CCCGAGAATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13557:254..1114+

>mRNA_P-wetherbeei_contig13557.1.1 ID=mRNA_P-wetherbeei_contig13557.1.1|Name=mRNA_P-wetherbeei_contig13557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig13557:254..1114+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCTCGCGCGGTGGCCGCCGTGCCGCGCCGCCATCGGCACCCGAAGC
TACGCAAAAGCTGCAAAAAGTACTGGCGCAGTCCGGCCTCGGCTCGCGCC
GCGACATGGAGCTGTTGATTAGTGGCGGCAAGGTCACGGTCAACGGCGAC
GTCGCCACCATAGGCGCGCGCGTGGGCCCGGCCGACCAGATCAAGGTCTC
CGGCCGTATCGTGCGTGCGCATTCCACGTCGCGGTTGCCGCGCGTGCTGC
TGTATCACAAGCCGGAAGGCGAGATCGCCAGCCGCGACGATCCGCGCGGC
CGGCCGAGCGTCTTCGAGCGCCTGCCGGCGTTGACCGGCGCCAAATGGAT
ATCGATAGGGCGGCTCGACTTCAATACCTGCGGGCTCCTCATGTTCACGA
CTTCAGGCGAACTCGCCAACCGCATGATGCATCCGCGTTTCGAAATCGAA
CGCGAATACGCCGTGCGCGTGATGGGCAAGTTGATGCAGGAACATGTGCA
GCAGCTGATGCAGGGCGTCGAGCTCGATGACGGGGTAGCGCGCTGCGAAA
GGGTGGACCTGCGCGGTGGCGAGGGCGCCAATCAATGGTGCCACGTCGTG
CTGAAGGAAGGACGCAATCGCATCGTGCGGCGGCTGTTCGAGAAGCTGGG
CTTTATCGTGAGCCGGCTGATGCGCGTGCGCTACGGGCCGGTCGAACTGC
CGTCGCGTGTTAAAAGAAACCAGTATTACGAGCTTACCGGCGAGGAGACG
CAGCGCCTGCTCGACTGGCTCGACGCGGCGCAGCAGCCGCAGCCGACCGA
GGCGCCCGCGACGCCGGGGCAGACGCCGCGGCGCGAGCCAGGTCGTCGCG
CCCGAGAATAA
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