prot_P-wetherbeei_contig1349.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig1349.3.1
Unique Name	prot_P-wetherbeei_contig1349.3.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	146

Homology

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: D7FUM9_ECTSI (Ribosomal protein S23, component of cytosolic 80S ribosome and 40S small subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM9_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 1.160e-91
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0

Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  GKP+GIRA RKLR+HRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGV+LLALYK+KKEKPRS
Sbjct:   62 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 206

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A835Z8V8_9STRA (Putative ribosomal protein S23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V8_9STRA)

HSP 1 Score: 269 bits (688), Expect = 4.840e-91
Identity = 135/145 (93.10%), Postives = 141/145 (97.24%), Query Frame = 0

Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  GKPSGIRA RKLR+HRRN+RWASKDYNK+HSVTAMKANPLGG+SMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLN+TDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVS+LALYK KKEKPRS
Sbjct:    1 MGKGKPSGIRAGRKLRIHRRNQRWASKDYNKAHSVTAMKANPLGGASMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSILALYKGKKEKPRS 145

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: M4BPE8_HYAAE (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BPE8_HYAAE)

HSP 1 Score: 256 bits (654), Expect = 7.400e-86
Identity = 131/141 (92.91%), Postives = 133/141 (94.33%), Query Frame = 0

Query:    5 KPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            KPSGIR ARKLRVHRR +RWA K YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRK  RVQLIKN KKIAAFVPRDGCLNF DENDEVLISGFGRRGHAVGDIPGVRFKVVKV+GVSLLALYKEKKEKPRS
Sbjct:    5 KPSGIRCARKLRVHRRTQRWAQKSYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKSCRVQLIKNSKKIAAFVPRDGCLNFVDENDEVLISGFGRRGHAVGDIPGVRFKVVKVSGVSLLALYKEKKEKPRS 145

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A4W5LQ08_9TELE (40S ribosomal protein S23 n=31 Tax=Eukaryota TaxID=2759 RepID=A0A4W5LQ08_9TELE)

HSP 1 Score: 255 bits (651), Expect = 4.620e-85
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0

Query:    6 PSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            P+GIR ARKLRVHRR +RW  K YNKSHS+TAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKC RVQLIKNGKKIAAFVPRDGCLN+ DENDEVLI+GFGRRGHAVGDIPGVRFKVVKVAGVSLLALYK+KKEKPRS
Sbjct:   29 PAGIRCARKLRVHRRTQRWNQKSYNKSHSITAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGCLNYVDENDEVLIAGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKDKKEKPRS 168

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: B8C1Z7_THAPS (RS23, ribosomal protein 23 40S small ribosomal subunit n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8C1Z7_THAPS)

HSP 1 Score: 249 bits (636), Expect = 3.840e-83
Identity = 123/142 (86.62%), Postives = 132/142 (92.96%), Query Frame = 0

Query:    4 GKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            GKP+GIR  RKLR+HRRN+RW    Y K+HSVTAMKANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLN+ DENDEVL++GFGR GHAVGDIPGVRFK VKVAGVSLLALYKEKKEKPRS
Sbjct:    2 GKPAGIRTGRKLRIHRRNQRWHDLKYTKAHSVTAMKANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLVAGFGRSGHAVGDIPGVRFKCVKVAGVSLLALYKEKKEKPRS 143

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: W7TKK2_9STRA (40s ribosomal protein s23 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKK2_9STRA)

HSP 1 Score: 249 bits (636), Expect = 4.110e-83
Identity = 124/145 (85.52%), Postives = 135/145 (93.10%), Query Frame = 0

Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  GKP+G  A RKLRVHRRNE+WASK +NK+HSVT MKANPLGG++MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNF DENDEVLI+GFGR GHAVGDIPGVRFKV+KV+GV LLAL+K+KKEKPRS
Sbjct:    1 MGKGKPAGSNAGRKLRVHRRNEKWASKRWNKAHSVTHMKANPLGGAAMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFVDENDEVLIAGFGRSGHAVGDIPGVRFKVIKVSGVGLLALFKDKKEKPRS 145

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A5A8EIQ0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EIQ0_CAFRO)

HSP 1 Score: 248 bits (633), Expect = 1.180e-82
Identity = 125/145 (86.21%), Postives = 133/145 (91.72%), Query Frame = 0

Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  GKP+GI+AARKLR HRR +RWA K YNKSHS+TAMKANP GG+SMAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKKIAAFVPRDG LNF DENDEVLISGFGR GHAVGDIPGVRFKVVKVAGVSLLAL+K KKEKPRS
Sbjct:    1 MTRGKPAGIQAARKLRNHRREQRWAQKTYNKSHSITAMKANPFGGASMAKGIVLEKMGVEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGSLNFVDENDEVLISGFGRAGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRS 145

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A7R9WFA5_9STRA (Hypothetical protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7R9WFA5_9STRA)

HSP 1 Score: 247 bits (630), Expect = 3.150e-82
Identity = 123/142 (86.62%), Postives = 131/142 (92.25%), Query Frame = 0

Query:    4 GKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            GKP+GIR  RKLR HRR +RW  + Y K+HS+TAMKANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLN+ DENDEVLISGFGR GHAVGDIPGVRFKV KVAGVSLLALYKEKKEKPRS
Sbjct:    2 GKPNGIRTGRKLRSHRRQQRWRDQKYCKAHSITAMKANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLISGFGRSGHAVGDIPGVRFKVAKVAGVSLLALYKEKKEKPRS 143

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A8E8PJI4_9STRA (40S ribosomal protein S23 n=2 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8PJI4_9STRA)

HSP 1 Score: 246 bits (629), Expect = 4.790e-82
Identity = 124/145 (85.52%), Postives = 131/145 (90.34%), Query Frame = 0

Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  G P+G+RAARKLR HRR +RWA K YNKSHSV AMKANPLGGSSMAKGIV+EKIGIEAKQPNSAIRKCVRVQLIKN KKI AFVP DGCLNF DENDEVL+SGFGR GHAVGDIPGVRFKVVKVAGVSLLAL+K KKEKPR+
Sbjct:    1 MSKGLPAGMRAARKLRTHRRKQRWAQKHYNKSHSVAAMKANPLGGSSMAKGIVVEKIGIEAKQPNSAIRKCVRVQLIKNSKKITAFVPNDGCLNFVDENDEVLVSGFGRSGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRA 145

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BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A6U0RBQ4_9STRA (Hypothetical protein n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A6U0RBQ4_9STRA)

HSP 1 Score: 246 bits (628), Expect = 6.360e-82
Identity = 122/142 (85.92%), Postives = 133/142 (93.66%), Query Frame = 0

Query:    4 GKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            GKP+GIR  RKLR HRR ++WA K Y K +S+TAM+ANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLN+ DENDEVLI+GFGR+GHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS
Sbjct:    2 GKPNGIRTGRKLRNHRREQKWADKGYCKKNSITAMRANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLIAGFGRKGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 143

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FUM9_ECTSI	1.160e-91	94.48	Ribosomal protein S23, component of cytosolic 80S ...	[more]
A0A835Z8V8_9STRA	4.840e-91	93.10	Putative ribosomal protein S23 n=1 Tax=Tribonema m...	[more]
M4BPE8_HYAAE	7.400e-86	92.91	Uncharacterized protein n=2 Tax=Peronosporaceae Ta...	[more]
A0A4W5LQ08_9TELE	4.620e-85	90.71	40S ribosomal protein S23 n=31 Tax=Eukaryota TaxID...	[more]
B8C1Z7_THAPS	3.840e-83	86.62	RS23, ribosomal protein 23 40S small ribosomal sub...	[more]
W7TKK2_9STRA	4.110e-83	85.52	40s ribosomal protein s23 n=2 Tax=Monodopsidaceae ...	[more]
A0A5A8EIQ0_CAFRO	1.180e-82	86.21	Uncharacterized protein n=2 Tax=Cafeteria roenberg...	[more]
A0A7R9WFA5_9STRA	3.150e-82	86.62	Hypothetical protein n=4 Tax=Bacillariophyta TaxID...	[more]
A0A8E8PJI4_9STRA	4.790e-82	85.52	40S ribosomal protein S23 n=2 Tax=Placidida sp. Ta...	[more]
A0A6U0RBQ4_9STRA	6.360e-82	85.92	Hypothetical protein n=2 Tax=Mediophyceae TaxID=58...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006032	Ribosomal protein S12/S23	PFAM	PF00164	Ribosom_S12_S23	coord: 32..144 e-value: 2.6E-50 score: 168.8
IPR006032	Ribosomal protein S12/S23	PIRSF	PIRSF002133	RPS12p_RPS12a_RPS23e_RPS12o	coord: 18..145 e-value: 9.0E-33 score: 110.4
IPR006032	Ribosomal protein S12/S23	PANTHER	PTHR11652	30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER	coord: 4..145
IPR006032	Ribosomal protein S12/S23	PROSITE	PS00055	RIBOSOMAL_S12	coord: 62..69
IPR005680	Ribosomal protein S23, eukaryotic/archaeal	TIGRFAM	TIGR00982	TIGR00982	coord: 8..144 e-value: 6.9E-55 score: 182.5
IPR005680	Ribosomal protein S23, eukaryotic/archaeal	CDD	cd03367	Ribosomal_S23	coord: 28..142 e-value: 1.32079E-76 score: 220.989
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140		coord: 27..145 e-value: 2.0E-45 score: 155.1
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 23..143
None	No IPR available	PANTHER	PTHR11652:SF14	40S RIBOSOMAL PROTEIN S23	coord: 4..145

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig1349	contig	P-wetherbeei_contig1349:2236..3312 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig1349.3.1	mRNA_P-wetherbeei_contig1349.3.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig1349 2227..3312 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig1349.3.1 ID=prot_P-wetherbeei_contig1349.3.1|Name=mRNA_P-wetherbeei_contig1349.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp
MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAK
GIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDEND
EVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006032	Ribosomal_S12/S23
IPR005680	Ribosomal_S23_euk/arc
IPR012340	NA-bd_OB-fold