mRNA_P-wetherbeei_contig13281.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13281.2.1
Unique NamemRNA_P-wetherbeei_contig13281.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13281.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13281contigP-wetherbeei_contig13281:724..1143 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1348908.KI518622_gene305
Model size420
Max annot lvl91061|Bacilli
Hectar predicted targeting categorysignal peptide
Exons1
Evalue0.000935
EggNOG OGsCOG0262@1|root,COG0262@2|Bacteria,1UIN4@1239|Firmicutes,4IUHN@91061|Bacilli,1ZEXS@1386|Bacillus
DescriptionKey enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
Cds size420
COG categoryH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185979.89765-CDS-P-wetherbeei_contig13281:723..11431683185979.89765-CDS-P-wetherbeei_contig13281:723..1143Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13281 724..1143 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13281.2.1prot_P-wetherbeei_contig13281.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13281 724..1143 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13281.2.1

>prot_P-wetherbeei_contig13281.2.1 ID=prot_P-wetherbeei_contig13281.2.1|Name=mRNA_P-wetherbeei_contig13281.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp
YPLHPLAWSALPRLCAAFPHPERNLRGFFADDVAGSLPYFLANSKVLSPQ
GEPNLYPLDALYQYFEPVWRGKETASLLGSFESLCTKARDLPLSRRLLRG
MWLLQSLHNSAFPSTQAFLLEALQLGPRELDPARVTLQKL
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mRNA from alignment at P-wetherbeei_contig13281:724..1143-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13281.2.1 ID=mRNA_P-wetherbeei_contig13281.2.1|Name=mRNA_P-wetherbeei_contig13281.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig13281:724..1143- (Phaeothamnion wetherbeei SAG_119_79)
TATCCGCTGCATCCCCTCGCCTGGAGCGCCTTGCCTCGGCTTTGCGCAGC
TTTTCCCCATCCAGAACGAAACTTGCGGGGCTTCTTTGCGGATGATGTGG
CCGGCTCGTTGCCCTACTTTCTGGCAAACTCTAAGGTGCTGTCACCGCAA
GGCGAGCCGAATCTTTATCCCCTAGATGCACTCTATCAGTACTTTGAGCC
TGTGTGGCGGGGCAAAGAGACAGCGAGCCTCTTGGGGTCGTTTGAATCCC
TCTGCACAAAGGCTCGCGATCTCCCCTTGTCGCGTCGTTTGTTGCGCGGG
ATGTGGCTCTTGCAGTCCCTTCACAACTCGGCATTCCCGAGCACTCAGGC
TTTCCTATTGGAAGCCCTACAGCTCGGTCCGCGGGAGCTAGACCCGGCCC
GGGTTACGCTCCAAAAGCTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13281:724..1143-

>mRNA_P-wetherbeei_contig13281.2.1 ID=mRNA_P-wetherbeei_contig13281.2.1|Name=mRNA_P-wetherbeei_contig13281.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig13281:724..1143- (Phaeothamnion wetherbeei SAG_119_79)
TATCCGCTGCATCCCCTCGCCTGGAGCGCCTTGCCTCGGCTTTGCGCAGC
TTTTCCCCATCCAGAACGAAACTTGCGGGGCTTCTTTGCGGATGATGTGG
CCGGCTCGTTGCCCTACTTTCTGGCAAACTCTAAGGTGCTGTCACCGCAA
GGCGAGCCGAATCTTTATCCCCTAGATGCACTCTATCAGTACTTTGAGCC
TGTGTGGCGGGGCAAAGAGACAGCGAGCCTCTTGGGGTCGTTTGAATCCC
TCTGCACAAAGGCTCGCGATCTCCCCTTGTCGCGTCGTTTGTTGCGCGGG
ATGTGGCTCTTGCAGTCCCTTCACAACTCGGCATTCCCGAGCACTCAGGC
TTTCCTATTGGAAGCCCTACAGCTCGGTCCGCGGGAGCTAGACCCGGCCC
GGGTTACGCTCCAAAAGCTA
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