mRNA_P-wetherbeei_contig9957.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A7K1B4U9_9ACTN (Tryptophan synthase alpha chain n=2 Tax=root TaxID=1 RepID=A0A7K1B4U9_9ACTN) HSP 1 Score: 404 bits (1038), Expect = 1.080e-140 Identity = 213/255 (83.53%), Postives = 229/255 (89.80%), Query Frame = 1 Query: 1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAIDG 765 +G +E R KRSAGRKLLVPYITGG PGW DA+RAA A GADAIEIGIPFSDPVMDGPVIQQASQ ALDAGA PVSIL++AR LDV +PLAVM YYNTVHHAGH RFAEQL AAGI AAIVPDLPLEESG WC+AADAS +ETVMLAAPTAPD+RLPRV ARARGFVYSVGLLGVTGER+ LAATATALA RLKA+TDVP+LVGVGVSNAEQA EAV+VADGVVQGASV+RR+L+ G DAVGEYVA VRAAIDG Sbjct: 7 YGRMEQSFRDKRSAGRKLLVPYITGGLPGWEDALRAAVAAGADAIEIGIPFSDPVMDGPVIQQASQLALDAGATPVSILDQARALDVDVPLAVMCYYNTVHHAGHHRFAEQLVAAGICAAIVPDLPLEESGPWCEAADASDVETVMLAAPTAPDDRLPRVCARARGFVYSVGLLGVTGERSALAATATALARRLKAVTDVPVLVGVGVSNAEQAREAVQVADGVVQGASVVRRLLEGGADAVGEYVAEVRAAIDG 261
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A539DQF8_9ACTN (Tryptophan synthase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DQF8_9ACTN) HSP 1 Score: 403 bits (1035), Expect = 3.190e-140 Identity = 214/253 (84.58%), Postives = 226/253 (89.33%), Query Frame = 1 Query: 4 GVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762 G LE LR KRSAGRKLLVPYITGG PGW AVRAAAA GADAIEIGIPFSDPVMDGPVIQQASQ ALD GA PVSIL+EAR LDVGIPLAVMTYYNTVHHAGH RFAE L A+GIVAAIVPDLPL+E+G WC+AADAS IETVMLAAPTAPD RLPR+ ARARGFVYSVGLLGVTGER LAATATALAARLKAITDVP+LVGVGVS+A QA +AV+VADGVVQGASVMRR L+ G DAVGEYVA VR+AID Sbjct: 9 GALERALRIKRSAGRKLLVPYITGGLPGWEHAVRAAAAAGADAIEIGIPFSDPVMDGPVIQQASQRALDCGATPVSILDEARGLDVGIPLAVMTYYNTVHHAGHHRFAESLAASGIVAAIVPDLPLDEAGPWCEAADASSIETVMLAAPTAPDARLPRICARARGFVYSVGLLGVTGERTTLAATATALAARLKAITDVPVLVGVGVSDAAQARQAVQVADGVVQGASVMRRFLEGGADAVGEYVAEVRSAID 261
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A6J6QML2_9ZZZZ (Tryptophan synthase n=3 Tax=root TaxID=1 RepID=A0A6J6QML2_9ZZZZ) HSP 1 Score: 400 bits (1029), Expect = 2.710e-139 Identity = 204/254 (80.31%), Postives = 227/254 (89.37%), Query Frame = 1 Query: 1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762 +GV+ETE RAKR+ GRKLLVPYITGG+PGW DAVRA AA GADAIEIGIPFSDPVMDGP+IQQASQ AL+ GA PVSIL E R LDV +P+AVM YYNTVHHAGH RFA QLR+AG+VAAIVPDLPLEESG WC AADA+GIETVMLAAPTAPDERLPRVAAR+RGF+YSVGLLGVTGER +LAATA ALA RLKA+TDVP+L+GVGVSNA QA EAV+VADGVV GASV+RR+++ G DAVGEY+A VR AID Sbjct: 9 YGVMETEFRAKRAVGRKLLVPYITGGYPGWQDAVRACAAAGADAIEIGIPFSDPVMDGPIIQQASQAALEGGATPVSILHEVRSLDVSVPIAVMLYYNTVHHAGHERFAAQLRSAGVVAAIVPDLPLEESGPWCAAADAAGIETVMLAAPTAPDERLPRVAARSRGFLYSVGLLGVTGERTELAATAAALAVRLKAVTDVPVLIGVGVSNAAQAKEAVQVADGVVMGASVVRRLIEGGADAVGEYIAEVRRAID 262
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A6I3WNB0_9ACTN (Tryptophan synthase alpha chain n=4 Tax=root TaxID=1 RepID=A0A6I3WNB0_9ACTN) HSP 1 Score: 394 bits (1012), Expect = 8.500e-137 Identity = 206/253 (81.42%), Postives = 225/253 (88.93%), Query Frame = 1 Query: 1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAI 759 FG +ETE RAKR AGRKLLVPYITGG GW A+RAAA GADAIEIGIPFSDPVMDGP+IQ+ASQ ALDAG PVSI EEAR+L+VGIPLAVM YYNTVHHAGH RFA QL +AGI AAIVPDLPLEESG WC AADA+GIETVMLAAPTAPD+RLPR+AARARGFVYSVGLLGVTGERA LA +ATALA RLKAITDVP+LVGVGVSNAEQA +A VADGV+QGASV+RR++D GP+AVGEYV+ VRAAI Sbjct: 3 FGRMETEFRAKRDAGRKLLVPYITGGLTGWQQAIRAAADAGADAIEIGIPFSDPVMDGPIIQEASQRALDAGVTPVSIFEEARELEVGIPLAVMCYYNTVHHAGHERFAYQLLSAGISAAIVPDLPLEESGLWCTAADAAGIETVMLAAPTAPDDRLPRIAARARGFVYSVGLLGVTGERASLAESATALARRLKAITDVPVLVGVGVSNAEQARQACVVADGVIQGASVVRRLMDGGPEAVGEYVSEVRAAI 255
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A7X9KGV3_9ACTN (Tryptophan synthase alpha chain n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KGV3_9ACTN) HSP 1 Score: 390 bits (1002), Expect = 2.830e-135 Identity = 206/254 (81.10%), Postives = 222/254 (87.40%), Query Frame = 1 Query: 1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762 FG +ET+ RAKR+AGRKLLVPYITGG GW DAVRAAAA GADAIEIGIPFSDPVMDGP+IQQASQ AL++GA PVSIL +AR LDV IPLAVMTYYNTVHHAGH RFA QL AGIVAAIVPDLPLEE+G WC+AADA+GIETVMLAAPTAPDERLPRV ARARGFVYSVGLLGVTGER LA TA ALA RLKAITDVP+LVGVGVSNA QA EA VADGVV GASV+RR+L+ G DAVGE+V VR AI+ Sbjct: 3 FGAMETDFRAKRAAGRKLLVPYITGGLAGWQDAVRAAAAAGADAIEIGIPFSDPVMDGPIIQQASQAALESGATPVSILHDARSLDVSIPLAVMTYYNTVHHAGHARFAAQLADAGIVAAIVPDLPLEEAGPWCEAADAAGIETVMLAAPTAPDERLPRVVARARGFVYSVGLLGVTGERDVLAHTAAALARRLKAITDVPVLVGVGVSNAAQAREACEVADGVVMGASVVRRLLEGGADAVGEFVGDVRHAIE 256
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A6L6D6C6_9ACTN (Tryptophan synthase alpha chain n=6 Tax=root TaxID=1 RepID=A0A6L6D6C6_9ACTN) HSP 1 Score: 387 bits (995), Expect = 4.220e-134 Identity = 201/254 (79.13%), Postives = 221/254 (87.01%), Query Frame = 1 Query: 1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762 G LE+ELRAKR AGRKLLVPYITGG GW DA+RAAAANGADAIEIGIPFSDPVMDGP+IQ ASQ+ALDAGA P+SIL + R +DV IPLAVM YYNT+H+AGH RFA L AG+ AAIVPDLPLEESG WC AADA+GIETVMLAAPTAPDERLPR+ R RGFVY+VGLLGVTGER +LA+TA LA RLK +T +PIL+GVGVSNAEQAAEAV VADGVVQGASVMRR+L+ GPDAVGEYVA VRAAID Sbjct: 4 LGFLESELRAKRDAGRKLLVPYITGGLDGWLDAIRAAAANGADAIEIGIPFSDPVMDGPIIQLASQKALDAGATPMSILNDLRQVDVSIPLAVMCYYNTIHNAGHERFANALAEAGVCAAIVPDLPLEESGPWCKAADAAGIETVMLAAPTAPDERLPRILERVRGFVYAVGLLGVTGERDELASTALLLARRLKQLTSIPILIGVGVSNAEQAAEAVSVADGVVQGASVMRRLLEGGPDAVGEYVAEVRAAID 257
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A6C7EFJ4_ILUCY (Tryptophan synthase alpha chain n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EFJ4_ILUCY) HSP 1 Score: 385 bits (989), Expect = 2.600e-133 Identity = 198/254 (77.95%), Postives = 222/254 (87.40%), Query Frame = 1 Query: 1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762 G ++ E RAKR+AGRKLLVPYITGG+PGW DA+RA AANGADA+EIGIPFSDPVMDGPVIQ ASQ AL+AG P S+L+E +LDV IPLAVMTYYN VHH G RFA L AGI AI+PDLPLEESG WC+AADA+GIET+MLAAPTAPDERLP VAARARGF+YSVGLLGVTGERA LA TATALAARLKAITDVP+LVGVGVSNAEQA +A RVADGV+QGAS++RR+++ GPDAVG+YVA VRAAID Sbjct: 1 MGRIDEEFRAKRAAGRKLLVPYITGGYPGWQDAIRACAANGADAVEIGIPFSDPVMDGPVIQAASQAALEAGVTPTSVLDEVPNLDVDIPLAVMTYYNLVHHPGPERFAANLARAGISGAILPDLPLEESGPWCEAADANGIETIMLAAPTAPDERLPLVAARARGFLYSVGLLGVTGERASLADTATALAARLKAITDVPVLVGVGVSNAEQAHQATRVADGVIQGASMVRRLMESGPDAVGDYVAEVRAAID 254
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: UPI000345746A (tryptophan synthase subunit alpha n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000345746A) HSP 1 Score: 384 bits (985), Expect = 1.400e-132 Identity = 197/255 (77.25%), Postives = 223/255 (87.45%), Query Frame = 1 Query: 1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAIDG 765 FG +E+E RAKR+AGRKLLVPYITGG+PGW DA+RA AANGADAIEIGIPFSDPVMDGPVIQQASQ ALD G P +IL+E +LDV IPL VMTYYN VHH G RFA L+ AGIV AI+PDLPLEESG WC AADA GIET+MLAAPTAPD+RLP+VAAR+RGF+YSVGLLGVTGER+ LA TAT LAARLK +T+VP+LVGVGVSNAEQA EA RVADGV+QGAS++RR+++ GPDAVG+YVA VRAAIDG Sbjct: 5 FGRIESEFRAKRAAGRKLLVPYITGGYPGWQDAIRACAANGADAIEIGIPFSDPVMDGPVIQQASQAALDDGITPNAILDEVPNLDVEIPLTVMTYYNLVHHPGPERFAASLQRAGIVGAILPDLPLEESGPWCAAADAHGIETIMLAAPTAPDDRLPKVAARSRGFLYSVGLLGVTGERSSLAQTATDLAARLKLVTEVPVLVGVGVSNAEQAYEATRVADGVIQGASMVRRLMESGPDAVGDYVAEVRAAIDG 259
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A4P5RX73_9ACTN (Tryptophan synthase alpha chain n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5RX73_9ACTN) HSP 1 Score: 383 bits (983), Expect = 2.210e-132 Identity = 195/253 (77.08%), Postives = 222/253 (87.75%), Query Frame = 1 Query: 1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAI 759 +G LET+LR +R AG K LVPYITGG+PGW DA+RA AANGADAIEIG+PFSDPVMDGP+IQQASQ+AL AGA P+SIL+E R LDVGIPLAVM YYNTV HAGH RFA L +G+ AI+PDLPLEESG WC+AADA+G+ETVMLAAPTAPD+RLPRV ARARGFVYSVGLLGVTGERA L TAT LA RLKAIT+VP+LVGVGVSNA+QAA+AV+VADGV+QGASVMRR+++ G DAVGEY+A VR AI Sbjct: 3 YGRLETQLRQRREAGGKSLVPYITGGYPGWQDAIRACAANGADAIEIGLPFSDPVMDGPIIQQASQKALQAGATPISILQEVRSLDVGIPLAVMCYYNTVFHAGHERFAFALADSGVSGAIIPDLPLEESGPWCEAADAAGVETVMLAAPTAPDDRLPRVVARARGFVYSVGLLGVTGERAALELTATDLARRLKAITEVPVLVGVGVSNAQQAAQAVQVADGVIQGASVMRRLIESGADAVGEYIAEVRRAI 255
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A848UKD8_9ACTN (Tryptophan synthase alpha chain n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UKD8_9ACTN) HSP 1 Score: 381 bits (979), Expect = 8.670e-132 Identity = 195/253 (77.08%), Postives = 219/253 (86.56%), Query Frame = 1 Query: 4 GVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762 G +E E R KR AGRKLLVPY+TGG+PGW DA+RAAAANGADA+EIG+PFSDPVMDGPVIQ+ASQ ALDAGA P S+L+E LDV IPL VMTYYN VHH GH RFA +L AG+ I+PDLPLEES WC AAD G+ET+MLAAPTAPDERLP VAARARGF+YSVGLLGVTGER+ LAATATALA RLKAITD+P+LVGVGVSNAEQAAEA RVADGV+QGAS++RR++ +GPDAVGEYVA VRAAID Sbjct: 3 GRIEAEFRNKREAGRKLLVPYLTGGYPGWQDAIRAAAANGADAVEIGVPFSDPVMDGPVIQEASQAALDAGATPASVLDEVPALDVEIPLLVMTYYNLVHHDGHRRFAHRLVQAGVSGCILPDLPLEESEPWCRAADQEGVETIMLAAPTAPDERLPLVAARARGFLYSVGLLGVTGERSSLAATATALAGRLKAITDLPVLVGVGVSNAEQAAEACRVADGVIQGASMVRRLMAEGPDAVGEYVAEVRAAID 255 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9957.1.1 >prot_P-wetherbeei_contig9957.1.1 ID=prot_P-wetherbeei_contig9957.1.1|Name=mRNA_P-wetherbeei_contig9957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPback to top mRNA from alignment at P-wetherbeei_contig9957:40..807+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9957.1.1 ID=mRNA_P-wetherbeei_contig9957.1.1|Name=mRNA_P-wetherbeei_contig9957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig9957:40..807+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9957:40..807+ >mRNA_P-wetherbeei_contig9957.1.1 ID=mRNA_P-wetherbeei_contig9957.1.1|Name=mRNA_P-wetherbeei_contig9957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig9957:40..807+ (Phaeothamnion wetherbeei SAG_119_79)back to top |