mRNA_P-wetherbeei_contig9911.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: A0A6H5JV21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV21_9PHAE) HSP 1 Score: 132 bits (333), Expect = 4.590e-36 Identity = 68/119 (57.14%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 1 EEDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENVEGHDIAWKPRKNLCEKVIKSKPRKGRRGPQREGASKTVPR----ESFFKFFLKPVMYD 345 E D+E L YL DV+C DK ++ GFTLEF F +NP+FT+AVL K+Y+TANIMD GEPL+E VEG I WK +NLCEK I+ RK +RG R G ++T+ + ESFFKFF PVMY+ Sbjct: 16 EPDLEALYYLSDVRCVDKDNLLGFTLEFHFDDNPYFTNAVLTKRYDTANIMDQGEPLLEGVEGTPIDWKSGRNLCEKTIR---RKIKRGGSRSGETRTITKVEKTESFFKFFQNPVMYE 131
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: D7FXQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ6_ECTSI) HSP 1 Score: 134 bits (338), Expect = 2.490e-35 Identity = 72/125 (57.60%), Postives = 90/125 (72.00%), Query Frame = 1 Query: 1 EEDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENVEGHDIAWKPRKNLCEKVIKSKPRKGRRGPQREGASKTVPR----ESFFKFFLKPVMYDPDEDDE 363 E D+E L YL DV+C DK + GFTLEF F +NP+F++AVL K+Y+TANIMD GEPL+E VEG I WK +NLCEK I+ RK +RG R G ++T+ + ESFFKFF PVMY+ DEDDE Sbjct: 224 EPDLEALYYLSDVRCVDKDTLLGFTLEFHFDDNPYFSNAVLTKRYDTANIMDQGEPLLEGVEGTPIDWKSGRNLCEKTIR---RKIKRGGSRSGETRTITKVEKTESFFKFFQNPVMYE-DEDDE 344
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: A0A836CG27_9STRA (Nucleosome assembly protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG27_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.050e-26 Identity = 56/116 (48.28%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 1 EEDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENVEGHDIAWKPRKNLCEKVI---KSKPRKGRRGPQREGASKTVPRESFFKFFLKPVM 339 E DV L +L DVKC D+ D+ GF LEF F+ N +FT++VL K Y+ A I+D GEPL++ VEG I WK KNLCEK + K + RKG G + ++ + +SFFKFFL P++ Sbjct: 161 ESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKG--GAAQTPVTRVIKTDSFFKFFLNPII 274
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: A0A1Z5JZ40_FISSO (Nucleosome assembly protein 1-like 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ40_FISSO) HSP 1 Score: 104 bits (260), Expect = 1.390e-24 Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 1 EEDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENVEGHDIAWKPRKNLCEKVIKSKPR-KGRRGPQREGASKTVPRESFFKFFLKPVM--YDPDEDDEDEAE 375 EEDV+CL++L D++C+D D KGFTL F FAEN +FT+ VL K Y N++ EP+I+NVEG I WKP K L K I K R KGR Q + +ESFF +F P + +P D+ DE E Sbjct: 139 EEDVDCLEHLQDIQCEDDVDGKGFTLRFFFAENEYFTNTVLTKSYQVPNLLVSDEPMIKNVEGTKIDWKPDKCLTHKKITKKQRGKGRHAGQVRTIVQQEEKESFFNWFSAPELPSLNPGVDEMDEEE 266
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: A0A7R9ZGJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGJ7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.830e-23 Identity = 52/127 (40.94%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 1 EEDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENVEGHDIAWKPRKNLCEKVIKSKPRK--GRRGPQREGASKTVPRESFFKFFLKPVMYDPDEDDEDEAE 375 E DV+CL++L DV C+D + +GF L F+F+EN +FTD VL K+Y N++ EP++++V G D+ WKP ++L + +K K R GRR Q +K +SFF FF P + +E DE++A+ Sbjct: 39 ERDVDCLEHLTDVTCEDYENGEGFVLRFKFSENEYFTDEVLTKRYEIPNLLLEDEPILKDVVGCDVHWKPGRSLTYREVKKKQRAKGGRRAGQIRTVTKRERTDSFFHFFSPPKLPGMEEMDEEQAD 165
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: F0XWB4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWB4_AURAN) HSP 1 Score: 99.0 bits (245), Expect = 1.510e-22 Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 1 Query: 1 EEDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDM-GEPLIENVEGHDIAWKPRK-NLCEKVIKSKPR--KGRRGPQREGASKTVPRESFFKFFLKPVMYDPDEDDEDEAE 375 E DV LKYL+DV+C D D+ GFT+EF FAENP+F+D+VL K Y N++D G+P +E + G +IAWK K NLC +K K + +G+ Q +K + SFF FF + D+DD E + Sbjct: 110 EPDVAALKYLVDVRCADFEDLTGFTVEFEFAENPFFSDSVLTKSYAIPNLVDANGQPELEKITGCEIAWKDAKDNLCVHEVKKKQKSKRGKNAGQTRVVAKLEDKPSFFHFFKSIKLPSADDDDXXEGD 238
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: A0A448ZGM5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGM5_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 5.460e-22 Identity = 53/125 (42.40%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 1 EEDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENVEGHDIAWKPRKNLCE-KVIKSKPRKGRRGPQREGASKTVPRESFFKFFLKPVMYDPDEDDEDEA 372 EED+ECL +L D+KC + + +GF+LEF FA N +F + VL K Y+ N++ EP+++NVEG +I WKP L +V K + G+ Q +K VPR+SFF FF P M + + DE+E Sbjct: 194 EEDIECLGHLEDIKCINDDNGEGFSLEFHFAPNDYFENTVLTKSYDVPNLLLADEPILKNVEGCEIKWKPNIALTHVEVTKQQRGTGKNAGQVRTVTKKVPRDSFFNFFTAPSMPNLETMDEEEC 318
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: A0A7S2RQ11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQ11_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.070e-21 Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 1 Query: 1 EEDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENVEGHDIAWKPRKNLC--EKVIKSKPRKGRRGPQREGASKTVPRESFFKFFLKPVM 339 E+D E L YL D++C D DM GF+++F F ENP+F++ VL K+Y +N++ EP +E V G I WKP + L EK K + +KGR Q ++ VP+ESFF +F P M Sbjct: 215 EDDTEALAYLRDIQCHDNEDMSGFSIQFHFRENPYFSNDVLTKRYEVSNLLKEEEPCLEKVFGTQIDWKPSRCLTFTEKKKKQRAKKGRNAGQVRVVTERVPKESFFHWFDAPNM 329
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: A0A6V1NWM6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWM6_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 2.550e-21 Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 1 Query: 4 EDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENVEGHDIAWKPRKNLC--EKVIKSKPRKGRRGPQREGASKTVPRESFFKFFLKPVM 339 +DV L+YL+D++C DK D+ GF LEF FA NP+F ++VL K Y+ A+I+D EP++ENV G I WKP +LC E +S R G+ +R V R SFF FF P M Sbjct: 204 QDVSALEYLIDIQCHDKADLTGFVLEFHFAPNPFFKNSVLSKSYDMASIVDNAEPVLENVSGTAIQWKPEMDLCFHEVQAQSADRPGQTQARR------VRRGSFFHFFGTPRM 311
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Match: A0A6D2I9R7_9BRAS (Uncharacterized protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2I9R7_9BRAS) HSP 1 Score: 96.7 bits (239), Expect = 3.020e-21 Identity = 58/127 (45.67%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 1 EEDVECLKYLMDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENVEGHDIAWKPRKNLCEKVIKSKPRKGRRGPQREGASKTVPRESFFKFFLKPVMYDPDED-DEDEAEE 378 E D E LKYL D+K + KGF LEF F NP+F + VL K Y+ ++D EPL+E G +I W P KNL +K++K KP+KG + + +K ESFF FF P + D DED DE+ AEE Sbjct: 146 ERDEEALKYLKDIKWSKIEEPKGFKLEFFFDTNPYFQNTVLTKSYH---MIDEDEPLLEKAMGTEIDWYPGKNLTQKILKKKPKKGSKNTK--PVTKMEDCESFFNFFSPPEVPDEDEDIDEERAEE 267 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9911.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9911.1.1 >prot_P-wetherbeei_contig9911.1.1 ID=prot_P-wetherbeei_contig9911.1.1|Name=mRNA_P-wetherbeei_contig9911.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp MDVKCDDKPDMKGFTLEFRFAENPWFTDAVLRKQYNTANIMDMGEPLIENback to top mRNA from alignment at P-wetherbeei_contig9911:964..2316- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9911.1.1 ID=mRNA_P-wetherbeei_contig9911.1.1|Name=mRNA_P-wetherbeei_contig9911.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1353bp|location=Sequence derived from alignment at P-wetherbeei_contig9911:964..2316- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9911:964..2316- >mRNA_P-wetherbeei_contig9911.1.1 ID=mRNA_P-wetherbeei_contig9911.1.1|Name=mRNA_P-wetherbeei_contig9911.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig9911:964..2316- (Phaeothamnion wetherbeei SAG_119_79)back to top |