mRNA_P-wetherbeei_contig9704.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9704.1.1
Unique NamemRNA_P-wetherbeei_contig9704.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: D7G0N8_ECTSI (DNA ligase (NAD(+)) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N8_ECTSI)

HSP 1 Score: 477 bits (1228), Expect = 1.550e-150
Identity = 361/847 (42.62%), Postives = 440/847 (51.95%), Query Frame = 1
Query:    1 LRNVPVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPE---------------AXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRL----------------------------VPSPDETAETAAEAAATPVMLEVE---------------------FTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTV--VGLPQRLP----AAAAEAETGATT---------------EPPPPFPAVA----EVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVR--DGAALRCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERT--------------------RRD-------SSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPA----SILADWDGWGGQLASNLLDAIDSARI-VSLCRLLYALGIPHVGRTTAEEMAGAFRGDFRAWWNA 2172
            LR   V  L    AAAELEAL+ EI  HDV YY ++ P+V+DAEYDALR RN EIE A+PSL+R DSPS+RVGA +                  A             G   S    RLP+VRH+  + SLDN F EE+ ++FV+RVRRA +++ L                            +P      + A E A T + + VE                     F AEPKIDGL+CAL YEDG  VRAATRGDG  GEDVTANAL +    +P  LP    AA AE   G                  E  P  P V     EVRGEV+M   AF  LN ER A G P FA+ RNAAAGSLRQL+PA+  +R LRFFAY AAVG    G+SA+     A V   A   A G  TQ  +L AL  WGFEVARP      SA +L+EFHR +A  R +L Y VDGVVYK+DD  L+  LGA+ARAPRWA+AHKF A    T ++ I +QVGRTG LTPVA+L PV +GGA V+RATLHN  EV  L +R GDRV VRRAGDVIPQV+     L+  P  D      +A E  +++          F  P  CPACG   V+  D A  RC AGL+CPAQA+ RL+HF S+  FDI GLGP++L +L+ AG+VR+P D+  LR +T                     RD       +S RDG   E  G XXXXX                                              SIL   +GWG   A N+LDA+D A+  VSL R +Y+LG+P VG   AE +A  F G+F A+W A
Sbjct:  167 LRFKDVATLEEAEAAAELEALSEEIAAHDVRYYLEDVPSVTDAEYDALRLRNGEIEAAFPSLVRSDSPSSRVGAASTTTDMEALNNQQELPVAAAAATSDGEGGAAPAGPKASKRAARLPAVRHLRSLGSLDNVFDEEKAAEFVDRVRRAADVATLGEGGGADRQAGAADGAAKNETKAGVEGVLPXXXXXXQMADEEARTAMPIGVELPGAADGGALLAGGEARAELCFVAEPKIDGLTCALLYEDGRFVRAATRGDGERGEDVTANALALGDAVIPHHLPLSSAAAVAEGADGGAVPTREAEAXXXXXXXXERAPSSPVVPRGRFEVRGEVFMSDEAFERLNEEREAEGLPAFASARNAAAGSLRQLDPAVTRRRGLRFFAYGAAVGQER-GRSASEEAAAAAVGGDALASAFG--TQDALLTALEGWGFEVARPRLPPTVSADELVEFHRRLARERSSLGYAVDGVVYKLDDLALQERLGASARAPRWAVAHKFGAEEGETVLSEIVIQVGRTGALTPVAVLEPVLLGGATVSRATLHNAREVEELGLRPGDRVKVRRAGDVIPQVL----GLASPPHPDSS----SAGEGDDDSAR--------FAFPTCCPACGTPVVKEEDKAVTRCPAGLSCPAQAVERLKHFVSKGAFDIQGLGPARLLELYEAGIVRSPVDVLRLRSQTAVQAQPXXXXXXXAPLADQRERDVEDGLEGASVRDGNKGEDGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILEGREGWGRLSARNVLDAVDRAKDGVSLGRFIYSLGVPLVGARMAEVIAEEFNGEFEAFWGA 994          
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: A0A4R3MIP5_9HYPH (DNA ligase n=1 Tax=Tepidamorphus gemmatus TaxID=747076 RepID=A0A4R3MIP5_9HYPH)

HSP 1 Score: 458 bits (1179), Expect = 1.840e-148
Identity = 320/731 (43.78%), Postives = 386/731 (52.80%), Query Frame = 1
Query:    4 RNVPVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPEAXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAETAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVRD--------GAALRCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRDSSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPASILADWDGWGGQLASNLLDAIDSARIVSLCRLLYALGIPHVGRTTAEEMAGAFRGDFRAWWNA 2172
            R  PV EL+ E AAAELE LA EI  HD  YY+++AP +SDAEYDALR+RN  IE A+P L+RPDSPS R+GA                        A  E+   VRH  PM SLDNAF E++V+ FVERVR  + L      P ET              E+ FTAEPKIDGLS ALRYE+G  V+AATRGDG  GEDVTANA T+  +P+RL        TG        F AV EVRGEVYM    F ALNA + A G   FA PRNAAAGSLRQL+P I A R LRFFAY  A G A       PS                  TQ  V EA  +WG     P    +RS  +++ F+R +   R  L YD+DGVVYKVD    +R LG  +R+PRWA+AHKF A  A+T +  I +QVGRTG LTPVA L PV VGG VV  ATLHN DE+ R DVR+GD V+V+RAGDVIPQ++  V  L   P                       E   PF  P  CPACG+ AVR+         A  RC+ GL CPAQA+ +LRHF SR+ FDI+GLG  ++      GL+RTPAD+FTL+ R          A AE+                                                    +AD +GWG   A+ L  AID+ R + L R +YALGI HVG T A+ +A  + G F A+  A
Sbjct:    8 RGKPVAELSREEAAAELEQLAHEIAAHDRRYYQEDAPIISDAEYDALRQRNAAIEAAFPDLVRPDSPSLRIGA------------------------APSEKFAKVRHKVPMLSLDNAFDEDDVAAFVERVRSFLNL------PAET--------------EILFTAEPKIDGLSIALRYENGRFVQAATRGDGEEGEDVTANAATIADVPKRL--------TGDG------FGAVFEVRGEVYMSHADFEALNARQEAEGGQLFANPRNAAAGSLRQLDPKITAARPLRFFAY--AWGEA----DRLPSD-----------------TQWGVYEAFRSWGLPT-NPLMRRVRSVPEIMAFYRQIEADRARLGYDIDGVVYKVDRLDWQRRLGFRSRSPRWAIAHKFPAQKAMTVLEDIEIQVGRTGALTPVAKLKPVTVGGVVVRNATLHNEDEIARKDVRIGDTVIVQRAGDVIPQILSVV--LEKRP-----------------------EWAVPFVFPTTCPACGSHAVREVNPRTGREDAVRRCTGGLVCPAQAVEKLRHFVSRNAFDIEGLGEKQIAAFFADGLIRTPADIFTLKARD---------AQAETK---------------------------------------------------IADREGWGPTSAAKLFAAIDARREIDLHRFIYALGIRHVGETNAKLLARHY-GTFEAFRTA 570          
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: A0A0A0DA48_9PROT (DNA ligase n=5 Tax=Bacteria TaxID=2 RepID=A0A0A0DA48_9PROT)

HSP 1 Score: 457 bits (1176), Expect = 4.590e-148
Identity = 311/723 (43.02%), Postives = 378/723 (52.28%), Query Frame = 1
Query:    1 LRNVPVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPEAXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAETAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVRD--GAALRCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRDSSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPASILADWDGWGGQLASNLLDAIDSARIVSLCRLLYALGIPHVGRTTAEEMAGAFRGDFRAW 2163
            LR  PV  LT E AA ELEALA EI  HD+ Y++ +AP VSDAEYDALRRRN E+E  +P LIRPDSPS +VGA  A                       R+    +RH  PM SL NAFT E+V DF+  VR  ++  R  P                    V   AEPKIDGLSC+LRYE G LV+AATRGDG+ GEDVTAN  T+  +PQRL   A               P V E+RGEVYM    FAALNA R   G P FA PRN+AAGSLRQL+P+I A R LRFF Y     SA  GK                       T   + +  AAWGF +  P +    SA +LL ++  +   R +LP+D+DGVVYKVD    +  LG  +RAPRWA AHKF A  A T +  I +QVGRTG LTPVA L P+ VGG VV+ ATLHN DE+RR DVR+GD VVV+RAGDVIPQ+VR +    L  R +G  E                     +  P  CP CG+ AVR+  GA  RC+ GL CPAQA+ RLRHF SR+ FDI+GLG   +   +  GL+RTP D+F L E+                                              DKA+    R R              +GWG + A  L +AI+S R + L RL+YALGI  VG  TA+ +A  + G F AW
Sbjct:    6 LRGRPVDALTPEEAATELEALAKEIAGHDIAYHQHDAPTVSDAEYDALRRRNAELETLYPELIRPDSPSAKVGAAPA--------------------GGFRK----IRHAIPMLSLGNAFTPEDVHDFLSSVRSFIKELRDDPERP-----------------VAIMAEPKIDGLSCSLRYEKGRLVQAATRGDGSEGEDVTANVKTIKDVPQRLNGDA---------------PDVLEIRGEVYMDRSDFAALNARRAEAGEPIFANPRNSAAGSLRQLDPSITASRPLRFFGYTWGEVSAPLGK-----------------------TIAEIRQRFAAWGFRLNEP-SRLCHSAEELLAYYDEIGALRSSLPFDIDGVVYKVDRLDWQERLGFVSRAPRWATAHKFPAEQAQTVLKAIDIQVGRTGSLTPVARLEPITVGGVVVSNATLHNEDEIRRKDVRVGDTVVVQRAGDVIPQIVRVI----LERRPEGAIE---------------------YVFPETCPECGSLAVREEGGAIRRCTGGLICPAQAVERLRHFVSRNAFDIEGLGDKHIRAFYADGLIRTPGDIFRLEEK----------------------------------------------DKASLTPLRNR--------------EGWGPKSAQKLFEAIESRRTIPLDRLIYALGIRQVGEATAKLLARHY-GSFAAW 562          
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: A0A846MW85_9PROT (DNA ligase n=1 Tax=Rhizomicrobium palustre TaxID=189966 RepID=A0A846MW85_9PROT)

HSP 1 Score: 452 bits (1163), Expect = 5.390e-146
Identity = 310/720 (43.06%), Postives = 396/720 (55.00%), Query Frame = 1
Query:    7 NVPVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPEAXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAETAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVRD--------GAALRCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRDSSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPASILADWDGWGGQLASNLLDAIDSARIVSLCRLLYALGIPHVGRTTAEEMAGAF 2142
            N PV +LT   A AEL+ LA EI  HD  Y+ ++AP +SDA+YDALR+RN  IE  +P LIRPDSPS RVGA A+                        E+   V H+ PM SLDNAF +E+VSDFV R+RR + L        E AE A             FT EPKIDGLS +LRYE G+LV+ ATRGDG+ GED+TAN  T+  +P R+P A                P V EVRGEVYM    FAALNA +   G+P +A PRN+AAGS+RQL+PAI   R L+FFAY      A    S  P+                  TQ  +L+A   +GF V  P      SA ++L F+R +  AR +LPYD+DGVVYKVD   L+  LG  +R+PRWA+AHKF A  A T V  I +QVGRTG+LTPVA L P+ VGG VV+ ATLHN DE+ R DVR+GD VV++RAGDVIPQVVR V                     TE+  E  A    PF+ P  CP CG+ AVR+            RC+ GL CPAQA+ RLR+F SRD FDI+GLG  +++  +  GL++ PAD+FTL++R     + +D    E                   +  A  AA+A  D KA   R+  +R+ K +                 NLL+AI++ R ++L R + ALGI HVG TTA+ +A  F
Sbjct:    2 NTPVDKLTPFEAIAELDHLAKEIAEHDRRYHGEDAPTISDADYDALRKRNAAIEARFPDLIRPDSPSHRVGAKAS------------------------EKFAKVLHVRPMLSLDNAFADEDVSDFVGRIRRFLGLV-------EDAELA-------------FTCEPKIDGLSASLRYEKGVLVQGATRGDGSEGEDITANLKTITDIPLRIPNA----------------PDVLEVRGEVYMTHADFAALNARQEVEGKPLYANPRNSAAGSVRQLDPAITKSRALKFFAY------AWGEVSEMPAD-----------------TQWGMLQAFKRFGFAV-NPLVRRCTSAEEILAFYRDIGAARASLPYDIDGVVYKVDSLSLQDRLGFVSRSPRWAIAHKFPAEQAETIVENIDIQVGRTGKLTPVAKLKPITVGGVVVSNATLHNEDEIARKDVRIGDTVVIQRAGDVIPQVVRVV---------------------TEKRPEGAA----PFDYPKTCPVCGSHAVREVDEKTGKEDVDRRCTGGLICPAQAVERLRYFASRDAFDIEGLGEKQVDLFYNTGLIKDPADIFTLKDRVE---ALKDVILEERK-----------------RQSAERAAKAGKDTKA--KREDGKRTFKEV----------------DNLLEAIEARRSIALERFINALGIRHVGETTAKLLARRF 574          
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: A0A7Y8MA06_9PROT (DNA ligase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8MA06_9PROT)

HSP 1 Score: 446 bits (1147), Expect = 9.500e-144
Identity = 307/722 (42.52%), Postives = 374/722 (51.80%), Query Frame = 1
Query:    1 LRNVPVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPEAXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAETAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVRDGAAL--------RCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRDSSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPASILADWDGWGGQLASNLLDAIDSARIVSLCRLLYALGIPHVGRTTAEEMAGAF 2142
            +R+VPV ELT E AA EL ALA EI  HD  YY+D+AP + DAEYDALR RN  IE  +P L R DSP  RVGA  +                        ER   VRH   M SLDNAF  E+V +F+ RVRR + LS    + D  A                 TAEPKIDGLS +LRYE G LV AATRGDG  GE VTANA T+  +P RL   +               P + E+RGEVYM    FAALN  + A G+P FA PRNAAAGSLRQL+P+I   R LRFFA+     SA  G+                       TQ  V+ A+A +G  V  P+   +  AA  L  +  +   R  LPYD+DG+VYKVD    +  LG  ARAPRWA+AHKF+   A+T +  I +QVGRTG LTPVA L PV VGG VV+ ATLHN DE+ R DVR+GDRVVV+RAGDVIPQ+VR V  +   P         A AEP              F  P  CP CG+AAVR+  A         RC+ GL C AQA  RL+HF SRD FDIDGLG  +++    AGL+R PAD+FTL                                                        + R  S  P     L +W+GWG    +NL  AI++ R ++L RLL+ALGI H+G+TTA  +A +F
Sbjct:    6 IRSVPVGELTVEEAATELAALAAEIARHDSAYYQDDAPRIPDAEYDALRLRNRAIETHFPELRREDSPELRVGAQPS------------------------ERFEKVRHARAMLSLDNAFAPEDVEEFLGRVRRFLGLS----AEDGLA----------------LTAEPKIDGLSASLRYEAGRLVLAATRGDGETGETVTANAKTIADIPHRLAGRS--------------VPGIFEIRGEVYMAHADFAALNERQAAEGKPLFANPRNAAAGSLRQLDPSITRARPLRFFAHGWGEASAVPGR-----------------------TQAEVMAAIAEFGLPV-NPYFRRVEDAAGALALYAEIERIRADLPYDIDGMVYKVDRLDWQERLGFVARAPRWAIAHKFAPEQAITRLRAIEIQVGRTGALTPVAKLEPVTVGGVVVSNATLHNEDEIARKDVRIGDRVVVQRAGDVIPQIVRVV--MDERP---------ADAEP--------------FVFPDHCPVCGSAAVRETNAKTGRADVVRRCTGGLVCEAQARERLKHFVSRDAFDIDGLGDKQVDAFFDAGLIRQPADIFTL--------------------------------------------------------EGRNASLDPP----LREWEGWGPVSEANLFRAIEARRTIALPRLLFALGIRHIGQTTARLLAASF 560          
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: A0A4R3M333_9HYPH (DNA ligase n=1 Tax=Aquabacter spiritensis TaxID=933073 RepID=A0A4R3M333_9HYPH)

HSP 1 Score: 445 bits (1145), Expect = 2.690e-143
Identity = 317/719 (44.09%), Postives = 368/719 (51.18%), Query Frame = 1
Query:    1 LRNVPVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPEAXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAETAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVRD--------GAALRCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRDSSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPASILADWDGWGGQLASNLLDAIDSARIVSLCRLLYALGIPHVGRTTAEEMA 2133
            LR + V  L  E AA EL ALA EI  HD  YY+D+AP VSDAEYD LRRR   IE  +P L   DS S RVGA                        AV  R   + H  PM SL NAF++EEV+DFV RV+R + L                         V FTAEPKIDGLSC+LRYEDG LV AATRGDG  GEDVTAN  T+  +PQ L  A                PAV EVRGEVYM    F ALNA + A GRP FA PRNAAAGSLRQL+ A+ A R LRFFAY  A G A+A                     L   TQ+ ++ A A WG     P        A LL  +R +   R  L YD+DGVVYKVD   L+R LG  +R+PRWALAHKF A  A T + GI +QVGRTG LTPVA LAPV VGG VVA ATLHN DE+ R DVR+GD VVV+RAGDVIPQVV  V  L   P         A AEP              +  P  CPACG+ AVR+         A  RC+ GL CPAQA+ RLRHF SR+ FDI+GLG  ++  L    LVR PAD+FTL  R                                                AA +++   R             DGWG   A+NL  AI+S R ++L R ++ALGI HVG T A  +A
Sbjct:   14 LRALAVAALAREDAANELAALADEIAGHDRRYYQDDAPTVSDAEYDRLRRRYEAIEARFPELKGEDSLSDRVGA------------------------AVSARFAKIAHAVPMLSLANAFSDEEVADFVARVKRFLNLGTEA---------------------VAFTAEPKIDGLSCSLRYEDGRLVSAATRGDGMVGEDVTANVRTIGEIPQVLDGA--------------DVPAVIEVRGEVYMDAADFLALNARQSAAGRPQFANPRNAAAGSLRQLDAAVTASRPLRFFAY--AWGEASA---------------------LPADTQSGIVAAFARWGLPT-NPLTILADDTAGLLAHYRRIEAERARLGYDIDGVVYKVDRLDLQRRLGFVSRSPRWALAHKFPAEQATTVLNGIEIQVGRTGALTPVAKLAPVTVGGVVVANATLHNEDEIARKDVRIGDTVVVQRAGDVIPQVVSVV--LDKRP---------AGAEP--------------YAFPTTCPACGSHAVREVDPKTGKQDAVRRCTGGLICPAQAVERLRHFVSRNAFDIEGLGEKQVHALFEWELVRAPADIFTLERRN-----------------------------------------------AASLQRLENR-------------DGWGKTSAANLFAAIESRRRIALDRFVFALGIRHVGETNARRLA 564          
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: UPI0003F837DE (NAD-dependent DNA ligase LigA n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0003F837DE)

HSP 1 Score: 447 bits (1150), Expect = 4.470e-143
Identity = 310/724 (42.82%), Postives = 373/724 (51.52%), Query Frame = 1
Query:    1 LRNVPVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPEAXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAETAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVR--DGAALRCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRDSSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPASILADWDGWGGQLASNLLDAIDSAR-IVSLCRLLYALGIPHVGRTTAEEMAGAFRGDFRAW 2163
            LR +PV +LT E A AEL  LA EI  HD LY++ + P ++DA+YD L RRN  IE  +P L R DSPS RVGA  AP A                          VRH  PM SL NAF  EEV++FV RVRR + L    P                    + F AEPK+DGLSC+LRYEDG LV AATRGDG  GEDVTAN  T+  +P  LP               PPFPAV EVRGEVYM    F A+N  R     PPFA PRNAAAGSLRQL+P+I AQR L FF Y  A+G  T+ + A                     TQ+ +   L  WGF + RP AA L     LL ++  +   R  LP+D+DGVVYKVD   L+  LG  +RAPRWA+AHKF A  A T +  I +QVGRTG LTPVA L PV VGG VV+RATLHN DE+ R D+R+GD V V+RAGDVIPQVV  +  LS  P E                          F  P  CP CG+ AVR  D A  RC+ GL CPAQA  RLRHF SR+ FDI+GLG   +E+    GLVR+PAD+FTL++R +R   T                                                            L    GW  +  +NLLDAI+  R  ++L R ++ALGI HVG  TA+ +A  + G   AW
Sbjct:   11 LRAIPVDDLTIEQAQAELAVLAAEIARHDALYHQQDRPEITDADYDRLVRRNGAIEARFPELQRSDSPSLRVGA--APAAGFG----------------------KVRHAMPMLSLGNAFAPEEVAEFVARVRRFLSLPDNAP--------------------LAFEAEPKVDGLSCSLRYEDGRLVLAATRGDGAEGEDVTANVRTIRDVPAELP---------------PPFPAVLEVRGEVYMTRDDFLAMNRARAERDEPPFANPRNAAAGSLRQLDPSITAQRPLCFFGY--ALGE-TSERVAD--------------------TQSGIRRRLKGWGFRLNRP-AARLGGVEALLRYYAGIGRRRAALPFDIDGVVYKVDAIDLQERLGFVSRAPRWAIAHKFPAEQAQTRLKAIAIQVGRTGALTPVAELEPVTVGGVVVSRATLHNEDEIARKDIRVGDLVTVQRAGDVIPQVVGVI--LSQRPHESES-----------------------FVFPDHCPECGSLAVREPDEAVRRCTGGLICPAQAKERLRHFVSRNAFDIEGLGEKIIEEFRNDGLVRSPADIFTLKDRVKRGEIT------------------------------------------------------------LVGRPGWKEKSVANLLDAIEERRNAIALHRFIFALGIRHVGEVTAKTLARHY-GSLDAW 565          
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: A0A3M1J7L2_9PROT (DNA ligase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1J7L2_9PROT)

HSP 1 Score: 442 bits (1137), Expect = 2.860e-142
Identity = 311/718 (43.31%), Postives = 373/718 (51.95%), Query Frame = 1
Query:   13 PVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPEAXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAETAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVRD--------GAALRCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRDSSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPASILADWDGWGGQLASNLLDAIDSARIVSLCRLLYALGIPHVGRTTAEEMAGAF 2142
            PV EL+ E A AELE LA EI  HD LYY+ + P +SDAEYDALRRRN  IE  +P L RPDSPS RVGA  AP                SAG         V H  PM SL NAF +E+V  FVER RR  +L +  P                    V FTAEPKIDGLS ALRYE   LV AATRGDG  GE+VTANA TV  +P+R+     +AE          FP + EVRGEVYM    F ALN  + A G   +  PRN AAGSLRQL+PAI A R L+FFAY      A    SA P+                  TQ  VLEAL  WGF V  P      S  ++L  H  +   R TL YD+DGVVYKV+D  L+R  G+++R PRWA+A+KF A  A+T +  I +QVGRTG LTPVA L PV VGG VV  ATLHN DE+ R DVR+GD V+V+RAGDVIPQ+V  V  L   P++                         PFE P +CPACG+ AVR+         A  RC+  L CPAQA+ RL+HF SR+ FDI+GLGP ++E  +  GLVR P D+FTL                                                          RR +    P   L + +GWG Q  +NL  AI+  R +SL R +YALGI HVG TTA  +A  +
Sbjct:    7 PVEELSEEEAKAELEWLAAEIARHDALYYQLDQPEISDAEYDALRRRNEAIEKRFPHLQRPDSPSLRVGA--AP----------------SAG------FEKVTHKVPMLSLGNAFEDEDVRAFVERFRRFFKLDQEAP--------------------VAFTAEPKIDGLSIALRYEKRQLVLAATRGDGFEGENVTANARTVGEIPKRV-----DAED---------FPDIFEVRGEVYMTHADFEALNERQAATGGQVYVNPRNTAAGSLRQLDPAITASRPLKFFAY------AWGEVSALPAD-----------------TQMGVLEALKRWGFPV-NPLTRLCTSVEEMLAVHHDLEMRRATLGYDIDGVVYKVNDLELQRRWGSDSRKPRWAIAYKFPAEKAMTLLRDIEIQVGRTGALTPVAKLEPVTVGGVVVRSATLHNEDEIARKDVRIGDTVIVQRAGDVIPQIVGVV--LERRPKD-----------------------AKPFEFPTLCPACGSRAVREINPKTGKEDAVRRCTGTLVCPAQAVERLKHFVSRNAFDIEGLGPKQIESFYEQGLVRKPVDIFTL---------------------------------------------------------ERRNAELDPP---LQEREGWGEQSVANLFAAINRRRAISLDRFIYALGIRHVGETTARLLARTY 557          
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: A0A2W4TNQ6_9PROT (DNA ligase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TNQ6_9PROT)

HSP 1 Score: 441 bits (1133), Expect = 1.350e-141
Identity = 301/722 (41.69%), Postives = 374/722 (51.80%), Query Frame = 1
Query:    1 LRNVPVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPEAXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAETAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVRD--------GAALRCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRDSSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPASILADWDGWGGQLASNLLDAIDSARIVSLCRLLYALGIPHVGRTTAEEMAGAF 2142
            L + PV+ LT E A AEL  LA EI  HD LYY+  AP +SDAEYDAL +RN EIE  +P LIRPDSPS RVGAP                          E    VRH  PM SL+NA +E E+ DFV+RVRR + +          +ET            +EFTAEPKIDGLS ++RYE G LV A+TRGDGT GE+VTAN  TV  +P R+ A                FP + +VRGE+Y+    F  LN  + A G+  FA PRNAAAGSLRQL+P I A R L+FFAY         G+++T                L   TQ  V EA   WGF    P A   RS  ++L  +R +A  R TL YD+DGVVYKV+   L+  LG  +R+PRWA+AHKF A  A+T +  I +QVGRTG LTPVA L PV VGG VVA ATLHN DE++R DVR+GD V+V+RAGDVIPQ+V   G +     +D                        PFE P  CP CG+ AVR+         A  RC+ GL CPAQA  RLRHF SRD FDI+GLG  ++E  +  G +R P+D+F L                                                       R+   RS K      L    G+G +   NL  AI++ R ++L R +YALGI HVG TTA ++A A+
Sbjct:    6 LAHKPVSALTREEARAELARLAAEIAYHDRLYYQLAAPEISDAEYDALVQRNAEIEARFPDLIRPDSPSRRVGAPPL------------------------EAFGKVRHRVPMLSLNNAMSEAEIYDFVDRVRRFLGMK--------ASET------------LEFTAEPKIDGLSISIRYEHGYLVEASTRGDGTEGENVTANVRTVRDIPHRITAK--------------DFPEIIDVRGEIYLSHADFQKLNEAQAAAGQRLFANPRNAAAGSLRQLDPRITASRPLKFFAY-------AWGEAST----------------LPARTQWGVYEAYRRWGFPT-NPLARLCRSVDEMLAVYRQLAENRATLGYDIDGVVYKVNRIDLQERLGYVSRSPRWAIAHKFPAEQAMTILRDIEIQVGRTGALTPVAKLEPVTVGGVVVANATLHNEDEIKRKDVRIGDTVIVQRAGDVIPQIV---GVVKEKRPKDAK----------------------PFEFPTKCPVCGSHAVREMNPRTGELDAVRRCTGGLVCPAQAKERLRHFVSRDAFDIEGLGEKQIEAFYDEGRIRQPSDIFRL------------------------------------------------------ARREAERSDK------LIHKKGYGRKSVENLFKAIEARRNITLDRFIYALGIRHVGETTARDLANAY 560          
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Match: A0A7X5EZJ6_9HYPH (DNA ligase n=3 Tax=Pannonibacter TaxID=227873 RepID=A0A7X5EZJ6_9HYPH)

HSP 1 Score: 441 bits (1133), Expect = 1.600e-141
Identity = 302/725 (41.66%), Postives = 376/725 (51.86%), Query Frame = 1
Query:   25 LTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRRRNTEIEVAWPSLIRPDSPSTRVGAPAAPEAXXXXXXXXXXXXTGSAGSAVRERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAETAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGEDVTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVAFAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVGSATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWAAGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAPRWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARATLHNFDEVRRL-----------DVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVAAAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVRDGAAL--------RCSAGLTCPAQALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRDSSTRDGAGAESDGXXXXXXSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQRRRRSPKPLPASILADWDGWGGQLASNLLDAIDSARIVSLCRLLYALGIPHVGRTTAEEMAGAF 2142
            LT E AAAELE LA EI  HD  Y+ ++AP +SDA+YDALRRRN EIE  +P L+RPDSPS RVGA                        +V +    + H  PM SLDNAFT+E+V DFV RVRR ++                     P+M ++  TAEPKIDGLS +LRYE+G+LV AATRGDGT GE+VTANA T+  +PQRLPA                 PAV EVRGEVYM    FAALNA   A G   FA PRNAAAGSLRQLNP I A R LRFFAY      A    S  P+                 ATQ +++   A WGF V  P         +LL  +  +   R  L YD+DGVVYK+D   L++ LG  +R+PRWA+AHKF A  A T +  I +QVGRTG LTPVA L PV VGG VV+ ATLHN D ++ +           D+R+GD V+++RAGDVIPQ+V                ++  A  P +           P+  P VCPACG+ AVR+  A         RC+ GL CPAQA  +L+HF  R+ FDI+GLG  +++     GLVRTPAD+FTL  R                                              DKAA  + R R              DGWG   A NL +AI++ R + L R ++ALGI HVG   A+ +A A+
Sbjct:   12 LTREEAAAELERLAAEIAGHDRRYHAEDAPTISDADYDALRRRNAEIEARFPDLVRPDSPSLRVGA------------------------SVADGFGKITHQVPMLSLDNAFTDEDVRDFVGRVRRFLKFD-------------------PLMGDLVVTAEPKIDGLSLSLRYENGVLVSAATRGDGTVGENVTANARTIADIPQRLPAG---------------VPAVVEVRGEVYMSHADFAALNARMAANGGKTFANPRNAAAGSLRQLNPEITASRPLRFFAY------AWGEMSEVPA-----------------ATQFDMVRQFADWGFAV-NPRMQRCARVEELLAVYHGIEEDRSGLGYDIDGVVYKIDRLDLQQRLGFVSRSPRWAIAHKFPAEKAYTVLKDIEIQVGRTGALTPVAKLEPVTVGGVVVSNATLHNEDYIKAIGMDGEPIRGGKDLRIGDTVMIQRAGDVIPQIV----------------DIDLARRPADAQ---------PYVFPTVCPACGSHAVREENAKTGRLDSVRRCTGGLICPAQAAEKLKHFVQRNAFDIEGLGDKQIDAFFAEGLVRTPADIFTLEAR----------------------------------------------DKAALTKLRNR--------------DGWGAVSARNLFEAINARRRIDLHRFIFALGIRHVGEGNAKLLARAY 569          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9704.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0N8_ECTSI1.550e-15042.62DNA ligase (NAD(+)) n=1 Tax=Ectocarpus siliculosus... [more]
A0A4R3MIP5_9HYPH1.840e-14843.78DNA ligase n=1 Tax=Tepidamorphus gemmatus TaxID=74... [more]
A0A0A0DA48_9PROT4.590e-14843.02DNA ligase n=5 Tax=Bacteria TaxID=2 RepID=A0A0A0DA... [more]
A0A846MW85_9PROT5.390e-14643.06DNA ligase n=1 Tax=Rhizomicrobium palustre TaxID=1... [more]
A0A7Y8MA06_9PROT9.500e-14442.52DNA ligase n=1 Tax=Alphaproteobacteria bacterium T... [more]
A0A4R3M333_9HYPH2.690e-14344.09DNA ligase n=1 Tax=Aquabacter spiritensis TaxID=93... [more]
UPI0003F837DE4.470e-14342.82NAD-dependent DNA ligase LigA n=1 Tax=Azospirillum... [more]
A0A3M1J7L2_9PROT2.860e-14243.31DNA ligase n=1 Tax=Alphaproteobacteria bacterium T... [more]
A0A2W4TNQ6_9PROT1.350e-14141.69DNA ligase n=1 Tax=Proteobacteria bacterium TaxID=... [more]
A0A7X5EZJ6_9HYPH1.600e-14141.66DNA ligase n=3 Tax=Pannonibacter TaxID=227873 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9704contigP-wetherbeei_contig9704:2..2290 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G0N8
PFAMsBRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5
Model size2172
Max annot lvl2759|Eukaryota
KEGG rclassRC00005
KEGG koko:K01972
KEGG ReactionR00382
KEGG Pathwayko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.55e-151
EggNOG OGsCOG0272@1|root,2QWTN@2759|Eukaryota
EC6.5.1.2
DescriptionLigase N family
Cds size2172
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187106.3079503-CDS-P-wetherbeei_contig9704:1..12851683187106.3079503-CDS-P-wetherbeei_contig9704:1..1285Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9704 2..1285 -
1683187106.3222353-CDS-P-wetherbeei_contig9704:1402..22901683187106.3222353-CDS-P-wetherbeei_contig9704:1402..2290Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9704 1403..2290 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9704.1.1prot_P-wetherbeei_contig9704.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9704 2..2290 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9704.1.1

>prot_P-wetherbeei_contig9704.1.1 ID=prot_P-wetherbeei_contig9704.1.1|Name=mRNA_P-wetherbeei_contig9704.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=724bp
LRNVPVTELTAELAAAELEALALEIGLHDVLYYRDNAPAVSDAEYDALRR
RNTEIEVAWPSLIRPDSPSTRVGAPAAPEAEAEAAAAAAAATTGSAGSAV
RERLPSVRHMAPMASLDNAFTEEEVSDFVERVRRAVELSRLVPSPDETAE
TAAEAAATPVMLEVEFTAEPKIDGLSCALRYEDGLLVRAATRGDGTWGED
VTANALTVVGLPQRLPAAAAEAETGATTEPPPPFPAVAEVRGEVYMPLVA
FAALNAERVAVGRPPFATPRNAAAGSLRQLNPAIAAQRCLRFFAYDAAVG
SATAGKSATPSGTVAVVTWVAAPPALGLATQTNVLEALAAWGFEVARPWA
AGLRSAADLLEFHRTVATARPTLPYDVDGVVYKVDDAVLRRWLGANARAP
RWALAHKFSAVTAVTTVTGIRVQVGRTGQLTPVALLAPVAVGGAVVARAT
LHNFDEVRRLDVRLGDRVVVRRAGDVIPQVVRRVGALSLSPREDGDGEVA
AAAEPTEEAEEEVAERPPPFELPMVCPACGAAAVRDGAALRCSAGLTCPA
QALGRLRHFGSRDGFDIDGLGPSKLEQLHGAGLVRTPADLFTLRERTRRD
SSTRDGAGAESDGGGGGDGSIAAVGTTAGKSFAGVAAEAADDDKAAGVRQ
RRRRSPKPLPASILADWDGWGGQLASNLLDAIDSARIVSLCRLLYALGIP
HVGRTTAEEMAGAFRGDFRAWWNA
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mRNA from alignment at P-wetherbeei_contig9704:2..2290-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9704.1.1 ID=mRNA_P-wetherbeei_contig9704.1.1|Name=mRNA_P-wetherbeei_contig9704.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2289bp|location=Sequence derived from alignment at P-wetherbeei_contig9704:2..2290- (Phaeothamnion wetherbeei SAG_119_79)
CTCCGCAATGTGCCGGTAACGGAGCTGACGGCGGAGCTGGCGGCGGCGGA GCTGGAAGCACTTGCATTGGAAATCGGCCTGCACGACGTGCTGTACTACC GAGATAACGCTCCCGCCGTAAGCGACGCCGAATACGACGCGCTGCGCCGA CGAAACACCGAAATCGAGGTTGCTTGGCCCTCGTTGATTCGCCCAGACAG CCCGTCCACACGCGTCGGCGCTCCGGCCGCTCCCGAAGCCGAAGCCGAAG CCGCCGCCGCCGCCGCCGCCGCCACCACCGGCAGTGCGGGCAGCGCTGTT CGCGAGCGGCTGCCCAGCGTGCGTCACATGGCTCCGATGGCGTCGCTGGA CAACGCCTTCACTGAAGAGGAGGTCTCCGACTTTGTGGAGCGCGTGCGCC GGGCCGTCGAGCTGTCTCGGCTGGTACCGTCGCCGGATGAAACCGCCGAA ACAGCCGCCGAAGCGGCCGCCACCCCCGTGATGCTGGAGGTGGAGTTTAC TGCTGAGCCCAAAATTGACGGGCTGTCCTGCGCGCTGCGCTATGAGGACG GCTTGCTCGTCCGGGCGGCGACGCGCGGCGACGGCACCTGGGGCGAGGAC GTCACCGCCAACGCCCTCACCGTCGTCGGACTGCCGCAACGGCTGCCCGC CGCGGCGGCGGAAGCTGAGACAGGGGCAACAACTGAGCCGCCGCCGCCGT TTCCCGCTGTGGCCGAGGTCCGCGGCGAAGTGTACATGCCGCTGGTGGCG TTCGCGGCGCTGAATGCGGAGCGGGTCGCCGTCGGCCGGCCGCCGTTCGC CACGCCACGCAACGCCGCCGCTGGCAGCCTGCGACAGCTCAACCCCGCCA TCGCGGCACAACGCTGCCTGCGCTTCTTCGCATACGATGTGATCGTTGCC GAGAGCAGCGATGGATCTGGCCGCGGCGGTGGAAGCAGAACCGGTGGCGG CAGCGGTAATGGCGGCGGCAGTGAGGAGACAGCAGGTAGCGCTGCTCGGG CAGAGGCAGCCGTGGGATCAGCAACGGCGGGTAAATCAGCGACGCCCAGC GGGACGGTGGCAGTGGTAACATGGGTCGCAGCGCCGCCAGCGCTGGGGCT GGCGACGCAGACAAACGTCCTCGAGGCGCTCGCGGCGTGGGGCTTCGAAG TGGCCCGGCCGTGGGCGGCCGGGCTGCGCTCCGCGGCCGACCTTTTAGAG TTCCACCGCACCGTTGCCACCGCCCGGCCGACCCTTCCCTACGACGTGGA CGGTGTCGTCTACAAAGTCGACGACGCGGTGCTGCGCCGATGGCTCGGCG CCAACGCCCGGGCGCCGCGCTGGGCACTTGCCCACAAGTTTTCGGCTGTT ACGGCGGTCACGACAGTTACGGGAATCCGCGTGCAGGTCGGGCGCACCGG CCAGCTGACGCCGGTGGCGCTGTTGGCACCTGTTGCCGTCGGTGGCGCCG TCGTGGCGCGGGCGACGCTGCACAACTTCGACGAAGTCCGGCGGCTCGAC GTGCGGCTGGGCGACCGTGTTGTTGTCCGCCGCGCCGGTGACGTCATCCC GCAGGTGGTGCGGCGCGTCGGCGCTCTTTCTCTTTCTCCCCGCGAGGATG GTGACGGCGAAGTTGCGGCGGCGGCGGAACCAACAGAGGAAGCTGAGGAG GAAGTGGCGGAGCGGCCACCGCCATTTGAGCTTCCGATGGTCTGCCCGGC CTGCGGCGCCGCCGCTGTCCGCGACGGCGCCGCGCTGCGCTGTTCGGCGG GGCTGACTTGCCCGGCGCAGGCGTTGGGGCGGCTGCGGCACTTCGGCTCG CGGGACGGCTTCGACATCGACGGGCTCGGCCCCAGCAAGCTGGAGCAGCT GCACGGCGCCGGGCTGGTGCGGACGCCGGCGGACCTTTTCACGCTGCGGG AGCGGACGCGGCGCGACTCGAGTACCAGAGACGGCGCCGGAGCAGAGTCG GACGGAGGAGGCGGTGGCGATGGCAGTATAGCGGCAGTGGGGACGACCGC TGGAAAGAGTTTTGCGGGTGTGGCGGCAGAGGCAGCGGACGACGACAAGG CGGCTGGGGTTCGCCAAAGACGCCGCCGGTCTCCGAAGCCGCTCCCGGCG TCGATATTGGCGGACTGGGACGGCTGGGGCGGGCAGTTGGCGTCGAACCT TCTCGACGCAATTGACAGCGCCCGAATCGTCAGCCTGTGCCGCCTTCTCT ATGCCTTGGGCATCCCGCACGTCGGCCGCACCACCGCGGAGGAGATGGCC GGAGCGTTCCGCGGTGACTTTCGCGCTTGGTGGAACGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9704:2..2290-

>mRNA_P-wetherbeei_contig9704.1.1 ID=mRNA_P-wetherbeei_contig9704.1.1|Name=mRNA_P-wetherbeei_contig9704.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2172bp|location=Sequence derived from alignment at P-wetherbeei_contig9704:2..2290- (Phaeothamnion wetherbeei SAG_119_79)
CTCCGCAATGTGCCGGTAACGGAGCTGACGGCGGAGCTGGCGGCGGCGGA
GCTGGAAGCACTTGCATTGGAAATCGGCCTGCACGACGTGCTGTACTACC
GAGATAACGCTCCCGCCGTAAGCGACGCCGAATACGACGCGCTGCGCCGA
CGAAACACCGAAATCGAGGTTGCTTGGCCCTCGTTGATTCGCCCAGACAG
CCCGTCCACACGCGTCGGCGCTCCGGCCGCTCCCGAAGCCGAAGCCGAAG
CCGCCGCCGCCGCCGCCGCCGCCACCACCGGCAGTGCGGGCAGCGCTGTT
CGCGAGCGGCTGCCCAGCGTGCGTCACATGGCTCCGATGGCGTCGCTGGA
CAACGCCTTCACTGAAGAGGAGGTCTCCGACTTTGTGGAGCGCGTGCGCC
GGGCCGTCGAGCTGTCTCGGCTGGTACCGTCGCCGGATGAAACCGCCGAA
ACAGCCGCCGAAGCGGCCGCCACCCCCGTGATGCTGGAGGTGGAGTTTAC
TGCTGAGCCCAAAATTGACGGGCTGTCCTGCGCGCTGCGCTATGAGGACG
GCTTGCTCGTCCGGGCGGCGACGCGCGGCGACGGCACCTGGGGCGAGGAC
GTCACCGCCAACGCCCTCACCGTCGTCGGACTGCCGCAACGGCTGCCCGC
CGCGGCGGCGGAAGCTGAGACAGGGGCAACAACTGAGCCGCCGCCGCCGT
TTCCCGCTGTGGCCGAGGTCCGCGGCGAAGTGTACATGCCGCTGGTGGCG
TTCGCGGCGCTGAATGCGGAGCGGGTCGCCGTCGGCCGGCCGCCGTTCGC
CACGCCACGCAACGCCGCCGCTGGCAGCCTGCGACAGCTCAACCCCGCCA
TCGCGGCACAACGCTGCCTGCGCTTCTTCGCATACGATGCAGCCGTGGGA
TCAGCAACGGCGGGTAAATCAGCGACGCCCAGCGGGACGGTGGCAGTGGT
AACATGGGTCGCAGCGCCGCCAGCGCTGGGGCTGGCGACGCAGACAAACG
TCCTCGAGGCGCTCGCGGCGTGGGGCTTCGAAGTGGCCCGGCCGTGGGCG
GCCGGGCTGCGCTCCGCGGCCGACCTTTTAGAGTTCCACCGCACCGTTGC
CACCGCCCGGCCGACCCTTCCCTACGACGTGGACGGTGTCGTCTACAAAG
TCGACGACGCGGTGCTGCGCCGATGGCTCGGCGCCAACGCCCGGGCGCCG
CGCTGGGCACTTGCCCACAAGTTTTCGGCTGTTACGGCGGTCACGACAGT
TACGGGAATCCGCGTGCAGGTCGGGCGCACCGGCCAGCTGACGCCGGTGG
CGCTGTTGGCACCTGTTGCCGTCGGTGGCGCCGTCGTGGCGCGGGCGACG
CTGCACAACTTCGACGAAGTCCGGCGGCTCGACGTGCGGCTGGGCGACCG
TGTTGTTGTCCGCCGCGCCGGTGACGTCATCCCGCAGGTGGTGCGGCGCG
TCGGCGCTCTTTCTCTTTCTCCCCGCGAGGATGGTGACGGCGAAGTTGCG
GCGGCGGCGGAACCAACAGAGGAAGCTGAGGAGGAAGTGGCGGAGCGGCC
ACCGCCATTTGAGCTTCCGATGGTCTGCCCGGCCTGCGGCGCCGCCGCTG
TCCGCGACGGCGCCGCGCTGCGCTGTTCGGCGGGGCTGACTTGCCCGGCG
CAGGCGTTGGGGCGGCTGCGGCACTTCGGCTCGCGGGACGGCTTCGACAT
CGACGGGCTCGGCCCCAGCAAGCTGGAGCAGCTGCACGGCGCCGGGCTGG
TGCGGACGCCGGCGGACCTTTTCACGCTGCGGGAGCGGACGCGGCGCGAC
TCGAGTACCAGAGACGGCGCCGGAGCAGAGTCGGACGGAGGAGGCGGTGG
CGATGGCAGTATAGCGGCAGTGGGGACGACCGCTGGAAAGAGTTTTGCGG
GTGTGGCGGCAGAGGCAGCGGACGACGACAAGGCGGCTGGGGTTCGCCAA
AGACGCCGCCGGTCTCCGAAGCCGCTCCCGGCGTCGATATTGGCGGACTG
GGACGGCTGGGGCGGGCAGTTGGCGTCGAACCTTCTCGACGCAATTGACA
GCGCCCGAATCGTCAGCCTGTGCCGCCTTCTCTATGCCTTGGGCATCCCG
CACGTCGGCCGCACCACCGCGGAGGAGATGGCCGGAGCGTTCCGCGGTGA
CTTTCGCGCTTGGTGGAACGCG
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