mRNA_P-wetherbeei_contig9665.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: D8LU79_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU79_ECTSI) HSP 1 Score: 232 bits (591), Expect = 7.580e-74 Identity = 118/199 (59.30%), Postives = 148/199 (74.37%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVV----YFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALAPPADEDA 585 WA+AMVPQPV+ V+MLFPIKESTE HR+ EA R++ + + YFMKQTVGNACGTVGLLH NA+++ I L+K+ FL RF E+TR + PA IA+ALHD+DE+E +H AA EGQS+Q+ + THFVCL+ +D +YELDGRKE PV HG ++ + L DAC VVK FM +DP ELRFTIVALAP A +DA Sbjct: 57 WALAMVPQPVLGVVMLFPIKESTEKHREEEAARVRESTESLNPKLYFMKQTVGNACGTVGLLHCALNASISKGITLDKECFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQEGQSDQIA-REEKINTHFVCLTEMDGTLYELDGRKEGPVPHGSTSPATLLQDACAVVKQFMDRDPGELRFTIVALAPTATDDA 254
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: A0A1V9YLF7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLF7_9STRA) HSP 1 Score: 218 bits (556), Expect = 1.050e-68 Identity = 112/197 (56.85%), Postives = 139/197 (70.56%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVV----YFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALAPPADE 579 WA+ MVP+PV+AV+MLFPIK TE + KAE ERI+ GQ V Y+MKQTVGNACGTVG+LHA NA + SFL F +TR PA+IA+ L +DDE+E H SAA EGQS+Q+ + + THFVCLS+VD H+YELDGRK P+NHGPS++ + L DAC VV+ FM +D E+RFTIVALA DE Sbjct: 48 WALDMVPRPVLAVIMLFPIKAHTEAYAKAEHERIEKNGQAVSPNVYYMKQTVGNACGTVGILHALGNAG--EHMTFTHGSFLQSFFAKTRDKTPAEIAEILEEDDELEETHASAAQEGQSDQLEHIDDPINTHFVCLSVVDGHLYELDGRKAFPINHGPSSSATLLEDACRVVRDFMQRDEGEVRFTIVALAKTPDE 242
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: A0A835ZFE8_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFE8_9STRA) HSP 1 Score: 217 bits (552), Expect = 3.980e-68 Identity = 118/197 (59.90%), Postives = 137/197 (69.54%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVV----YFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALAPPADE 579 WA+ MVPQP +AVLMLFP+K ++E HR EA RI+ +GQVV Y+MKQTVGNACGTVGLLHA NAA DSFLSRFL RTR P IA L +D E+E HG+AAAEGQS L V THFVC V +YELDGRK +P++HG +T + L DA VV+ FMA+DPEELRFTIVALAP ADE Sbjct: 50 WALDMVPQPALAVLMLFPVKAASEAHRAEEAARIEREGQVVSPDVYYMKQTVGNACGTVGLLHAVGNAATKAN-----DSFLSRFLARTRGQTPDAIATVLAEDTELEETHGAAAAEGQS-AAPALDEDVTTHFVCFVEVGGRLYELDGRKRSPIDHGATTPAALLRDAARVVRAFMARDPEELRFTIVALAPLADE 240
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: A0A067C1R0_SAPPC (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1R0_SAPPC) HSP 1 Score: 211 bits (536), Expect = 1.400e-65 Identity = 107/193 (55.44%), Postives = 134/193 (69.43%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVV----YFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALAP 567 WA+ MV +PV+AV+MLFPIK TE + K E +RI+A GQVV Y+MKQTVGNACGTVG+LHA N + + + SFL F E+TR+ P +IA L DDE+E H SAA EGQS Q+ + + THFVC VDDH+YELDGRK P+NHGPS+ E+ L DAC V++ FM +D E+RFTIVAL P Sbjct: 48 WALDMVLRPVLAVIMLFPIKTHTEAYAKEERQRIEASGQVVSPNVYYMKQTVGNACGTVGILHALGN--VGDYVAYQPGSFLQTFFEKTRAKTPEEIAVILEGDDELEETHASAAQEGQSEQLEHVDDPINTHFVCFCTVDDHLYELDGRKAFPINHGPSSRETLLEDACRVIQSFMQRDDGEVRFTIVALRP 238
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: A0A8K1FQY3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQY3_PYTOL) HSP 1 Score: 210 bits (535), Expect = 1.600e-65 Identity = 107/198 (54.04%), Postives = 137/198 (69.19%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVV----YFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALAPPADED 582 WA+ MVP+PV+ VLMLFPIK+ TE K EA RI+ GQVV Y+MKQTVGNACGT+GLLHA N + + + S+L + +T P IA L +DDE+E H SAA EGQS QV + V+THF+C S VD H+YELDGRK+ P+NHGPS+ E+ L+DAC V++ FM +D E+RFTI+ALA AD+D Sbjct: 46 WALDMVPKPVVGVLMLFPIKKHTEAFAKEEAARIEKDGQVVSPHVYYMKQTVGNACGTIGLLHAIGN--MRQHVTIPATSYLGKLFNQTVGQTPDKIADYLEEDDELEDTHESAAQEGQSEQVEDVDDPVDTHFICFSCVDGHLYELDGRKKFPINHGPSSQETLLSDACKVIQQFMVRDEGEVRFTILALAKTADDD 241
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: A0A024UT19_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UT19_9STRA) HSP 1 Score: 210 bits (534), Expect = 2.130e-65 Identity = 109/192 (56.77%), Postives = 135/192 (70.31%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVV----YFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALA 564 WA+ MV +PV+ V+MLFPIK +E+H K + ERI+ +GQ+V YFMKQTVGNACGTVG+LHA NA + SFLS F +T P +IA L DDDEIE H SAA EGQS Q+ + + THFVC S+VD H+YELDGRK+ PVNHGPS+ E+ L DAC V++ FMA+D E+RFTIVALA Sbjct: 46 WALEMVLRPVLGVVMLFPIKPVSELHAKEQLERIEKEGQIVSPNVYFMKQTVGNACGTVGILHALGNAK--DYLPPRDGSFLSSFFSKTVGKTPDEIAAILQDDDEIEETHASAAQEGQSEQLERVDDPINTHFVCFSVVDGHLYELDGRKKFPVNHGPSSQETLLEDACRVIRQFMARDEGEVRFTIVALA 235
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: H3H379_PHYRM (Ubiquitin carboxyl-terminal hydrolase n=15 Tax=Phytophthora TaxID=4783 RepID=H3H379_PHYRM) HSP 1 Score: 207 bits (527), Expect = 2.450e-64 Identity = 104/197 (52.79%), Postives = 137/197 (69.54%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQV----VYFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALAPPADE 579 WA+AMVP PV+AV+MLFPIK TE K EA+RI+ GQ+ VY+M+QTVGNACGTVG+LHA N + + L S+L +F T++ P +IA+ L +DDE+E HGSAA GQS Q+ + + THFVC S VD +YELDGRK+ P+NHGPS+ ++ L DAC +K FMA+D E+RFTI+ALA A + Sbjct: 46 WALAMVPSPVVAVIMLFPIKPHTEEADKQEAKRIEKDGQIMSPNVYYMRQTVGNACGTVGILHAIGN--MRHLVRLTPGSYLDKFFNTTKTKTPEEIAQYLEEDDELEETHGSAAEAGQSEQLESVDDPINTHFVCFSCVDGTLYELDGRKKRPINHGPSSPDTLLQDACQAIKKFMARDEGEMRFTILALAKTATD 240
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: W4GMT7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMT7_9STRA) HSP 1 Score: 207 bits (527), Expect = 2.610e-64 Identity = 108/192 (56.25%), Postives = 133/192 (69.27%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVV----YFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALA 564 WA+ MV +PV+ V+MLFPIK +TE H K E ERI+ GQ+V Y+MKQTVGNACGTVG+LHA NA + SFLS F +T P +IA L DDEIE H SAA +GQS Q+ + + THFVC S+VD H+YELDGRKE P+NHGPS+ E+ L DAC V++ FMA+D E+RFTIVALA Sbjct: 48 WALEMVLRPVLGVVMLFPIKPATEDHAKQERERIEKDGQIVSKNVYYMKQTVGNACGTVGILHALGNAR--DYLPPRHGSFLSSFFSKTDGKTPDEIAAILQADDEIEETHASAAQDGQSEQLEHVDDPINTHFVCFSVVDGHLYELDGRKEFPINHGPSSPETLLGDACAVIRQFMARDEGEVRFTIVALA 237
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: M4BQF5_HYAAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQF5_HYAAE) HSP 1 Score: 206 bits (525), Expect = 4.770e-64 Identity = 103/195 (52.82%), Postives = 137/195 (70.26%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVV----YFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALAPPA 573 WA+ MV P++AVLMLFPIK TE K EA RI+ +GQ V Y+M+QTVGNACGTVG+LHA N + ++L S+L +F T++ P +IA+ L +DDE+E HG AA GQS Q++ + + THFVC S VD ++YELDGRK++P+NHGPS+ E+ L DAC V+K FMA+D E+RFTI+ALA A Sbjct: 45 WALGMVSTPIVAVLMLFPIKPHTEEADKQEAARIEKEGQTVSPDVYYMRQTVGNACGTVGILHAVGN--MRHLVQLAPGSYLDKFFNTTKTKTPQEIAQYLEEDDELEKTHGGAAEAGQSEQLQSVDDPINTHFVCFSCVDGNLYELDGRKKSPINHGPSSQETILQDACKVIKKFMARDENEMRFTILALAKTA 237
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Match: A0A6G0W7W6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7W6_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.400e-64 Identity = 105/192 (54.69%), Postives = 136/192 (70.83%), Query Frame = 1 Query: 1 WAMAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVV----YFMKQTVGNACGTVGLLHATFNAALAGKIELEKDSFLSRFLERTRSMAPADIAKALHDDDEIEAIHGSAAAEGQSNQVRILTPSVETHFVCLSLVDDHVYELDGRKETPVNHGPSTAESFLADACNVVKGFMAKDPEELRFTIVALA 564 WA+ MV +PV+AV++LFPIK ++E H K + RI+ +GQVV Y+MKQTVGNACGTVG+LHA NA + SFL+ F ++T P +IA+ L DDDE+E H SAA EGQS Q+ + + THFVC S V+ H+YELDGRK+ P+NHGPS+ E+ L DAC V+K FMA+D E+RFTIVALA Sbjct: 49 WALEMVLRPVLAVVLLFPIKPASEEHTKEQRGRIEREGQVVSDNVYYMKQTVGNACGTVGILHALGNARHV--LPPRPGSFLATFFDKTHGKTPDEIAEILEDDDELEETHASAAQEGQSEQLEHVDDPINTHFVCFSTVEGHLYELDGRKQFPINHGPSSPETLLEDACRVIKEFMARDEGEVRFTIVALA 238 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9665.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9665.1.3 >prot_P-wetherbeei_contig9665.1.3 ID=prot_P-wetherbeei_contig9665.1.3|Name=mRNA_P-wetherbeei_contig9665.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=194bp MAMVPQPVIAVLMLFPIKESTEVHRKAEAERIKAQGQVVYFMKQTVGNACback to top mRNA from alignment at P-wetherbeei_contig9665:2..1169+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9665.1.3 ID=mRNA_P-wetherbeei_contig9665.1.3|Name=mRNA_P-wetherbeei_contig9665.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1168bp|location=Sequence derived from alignment at P-wetherbeei_contig9665:2..1169+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9665:2..1169+ >mRNA_P-wetherbeei_contig9665.1.3 ID=mRNA_P-wetherbeei_contig9665.1.3|Name=mRNA_P-wetherbeei_contig9665.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig9665:2..1169+ (Phaeothamnion wetherbeei SAG_119_79)back to top |