mRNA_P-wetherbeei_contig9535.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: A0A844ZEI8_9SPHN (DUF4019 domain-containing protein n=1 Tax=Parapontixanthobacter aurantiacus TaxID=1463599 RepID=A0A844ZEI8_9SPHN) HSP 1 Score: 77.0 bits (188), Expect = 1.960e-14 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 88 AARKWLTEIDRGQVEKAWAETSQLFQK--TAPDGARQLGLSRDETGLPRDRTEKSKRVTQSLPGLPAGSYTVVEFETRFARE-SYTETAILCQEGN-WKIVGYFMR 393 +AR WL +D G E++W E F++ TA + A Q+ R+ G + R ++++ +SLPG PAG+Y V++F+T FA + ET ++ EG W +VGYF+R Sbjct: 154 SARDWLALVDAGNWEESWQEAGAFFRQSVTAAEWAAQVRPVREPIGAVQSRELANQQIAESLPGAPAGTYLVLQFDTDFANKPDSVETVVMADEGGEWGVVGYFVR 259
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: UPI001CA4F43D (helix-turn-helix transcriptional regulator n=1 Tax=Sphingomonas sp. RHCKR7 TaxID=2862497 RepID=UPI001CA4F43D) HSP 1 Score: 72.8 bits (177), Expect = 7.530e-13 Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 76 EASEAARKWLTEIDRGQVEKAWAETSQLFQK--TAPDGARQLGLSRDETGLPRDRTEKSKRVTQSLPGLPAGSYTVVEFETRFA-RESYTETAILCQE-GNWKIVGYFMR 393 EAS AAR+W+ +D GQ + +W +++F++ T+ + R G R +S T +LPG+PAG Y V++F+TRFA + ET +L +E G+W++ GYF+R Sbjct: 150 EASSAARRWVEMLDAGQWDASWQAAAEVFKRSITSTQWQAKSQSVRTPLGHVSLRVLQSAVKTTTLPGVPAGDYEVLQFQTRFATKPDGLETVVLSKEDGSWRVSGYFIR 259
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: A0A290T9M0_9GAMM (Uncharacterized protein n=4 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A290T9M0_9GAMM) HSP 1 Score: 64.3 bits (155), Expect = 1.370e-10 Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 1 Query: 85 EAARKWLTEIDRGQVEKAWAETSQLFQKTAPDGARQLGLSRDETGLPR--DRTEKSKRVTQSLPGLPAGSYTVVEFETRFA--RESYTETAILCQEGNWKIVGYFMR 393 ++A WL ID G + +W +TS F+ + QL L + T L + R+ SLPG+P G+Y V++F T++ RES ++ +G W+ +GYF++ Sbjct: 24 QSANNWLELIDSGDYQASWQDTSDRFKNQVSEAQWQLALEQVRTPLGKVVKRSPLDSTRHTSLPGMPDGTYQVMQFSTQYENKRESIETLSMTLIDGKWQAIGYFIK 130
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: A0A511URU6_9GAMM (Uncharacterized protein n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511URU6_9GAMM) HSP 1 Score: 63.9 bits (154), Expect = 2.200e-10 Identity = 45/133 (33.83%), Postives = 65/133 (48.87%), Query Frame = 1 Query: 7 RFLIVFMLLNGCTAPPHDDFDAIEASEAARKWLTEIDRGQVEKAWAETSQLFQK--TAPDGARQLGLSRDETGLPRDRTEKSKRVTQSLPGLPAGSYTVVEFETRFARE-SYTETAILCQEGN-WKIVGYFMR 393 +F+I +LL +P A A WL ID GQ E+AW +S L Q +A AR +GL+R + G+ R S+PG P G Y F+TRF + TET +G+ WK+ GY+++ Sbjct: 6 KFVITTLLL--VLSPVAHSTTQAAAEAAVLAWLENIDSGQYEQAWENSSTLLQVPLSASMLARTVGLARRDFGVVESRRRTRVVRETSMPGAPFGDYMEFTFQTRFENKPQITETITPHLDGDTWKVSGYYVQ 136
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: A0A2G6FAV5_9DELT (Uncharacterized protein n=1 Tax=Desulfobulbus propionicus TaxID=894 RepID=A0A2G6FAV5_9DELT) HSP 1 Score: 64.3 bits (155), Expect = 3.500e-10 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 1 Query: 91 ARKWLTEIDRGQVEKAWAETSQLFQKTAPDGARQLGLS--RDETGLPRDRTEKSKRVTQSLPGLPAGSYTVVEFETRFA-RESYTETAILCQE--GNWKIVGYFMR 393 A+ WL ID G+ K+W S +F+ + LS R G R ++ SLPG+P GSY V++F T+F +E+ ET + +E G WK GYF++ Sbjct: 72 AKNWLAIIDNGEYAKSWDGASNIFKNALTSDMWEESLSAIRKPLGQLISRKMLKQQYHSSLPGVPPGSYFVIQFSTKFENKENVVETITMAKEKDGTWKSAGYFIK 177
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: A0A2E4PD43_FLASP (LuxR family transcriptional regulator n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A2E4PD43_FLASP) HSP 1 Score: 64.3 bits (155), Expect = 1.040e-9 Identity = 46/142 (32.39%), Postives = 66/142 (46.48%), Query Frame = 1 Query: 16 IVFMLLNGCTAPPHDDFDAIEASEA------------ARKWLTEIDRGQVEKAWAETSQLF--QKTAPDGARQLGLSRDETGLPRDRTEKSKRVTQSLPGLPAGSYTVVEFETRFA-RESYTETAILCQE-GNWKIVGYFMR 393 + F+ +NG P A +AS A+KWL +D+ ++W E +F Q +A A + R G R+ SLPG+PAG Y V+EF+T FA + ET IL +E WK+ GYF+R Sbjct: 119 VAFLSVNGVEEPRASSALASQASAXXXXXXXXXXXXQAQKWLMLVDQQNWSESWREAGTIFRSQISADGWASAIVPVRKPLGAVISRSLAKATKATSLPGVPAGEYEVLEFQTNFAAKRGAIETVILAKEQAGWKVDGYFIR 260
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: UPI001BAF23A6 (helix-turn-helix transcriptional regulator n=1 Tax=Sphingopyxis granuli TaxID=267128 RepID=UPI001BAF23A6) HSP 1 Score: 64.3 bits (155), Expect = 1.040e-9 Identity = 43/126 (34.13%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 28 LLNGCTAPPHDDFDAIEASEAARKWLTEIDRGQVEKAWAETSQLF--QKTAPDGARQLGLSRDETGLPRDRTEKSKRVTQSLPGLPAGSYTVVEFETRFA-RESYTETAILCQE-GNWKIVGYFMR 393 L + +AP A A++A R WLT ID+ ++W + +F Q +A A + R G R+ T SLPG+PAG Y V+EF+T FA + ET ++ +E W++ GYF+R Sbjct: 136 LASQTSAPSSAPATAASANQA-RNWLTLIDQQNWSESWGKAGTIFRSQISADGWASAIVPVRKPLGTVISRSLAKVTKTTSLPGVPAGEYEVLEFQTNFAAKRGAIETVVMVKEQAGWRVDGYFIR 260
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: A0A2D6T4D6_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T4D6_9PROT) HSP 1 Score: 60.8 bits (146), Expect = 3.440e-9 Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 1 Query: 88 AARKWLTEIDRGQVEKAWAETSQLFQKTA--PDGARQLGLSRDETGLPRDRTEKSKRVTQSLPGLPAGSYTVVEFETRFARESYT-ETAILCQE--GNWKIVGYFMR 393 AA++WL IDRG + W + Q D + L R G R +S + SLPG+P GSY V++++T FA++ ET +E G W++ GY++R Sbjct: 31 AAKQWLALIDRGNYGEGWERAATYLQGIVMKDDLIKALKAVRTPLGAVISRRLRSAQTATSLPGMPDGSYVVIQYDTVFAKKKKAVETITPMRESGGAWRVAGYYIR 137
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: A0A4R1TXX6_9SPHN (Regulatory LuxR family protein n=1 Tax=Sphingomonas sp. PP-CC-3G-468 TaxID=2135656 RepID=A0A4R1TXX6_9SPHN) HSP 1 Score: 61.6 bits (148), Expect = 1.000e-8 Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 1 Query: 76 EASEAARKWLTEIDRGQVEKAWAETSQLF--QKTAPDGARQLGLSRDETGLPRDRTEKSKRVTQSLPGLPAGSYTVVEFETRFA-RESYTETAILCQEGN-WKIVGYFMR 393 +AS AARKW +D G+ + +W + F Q T + R G RT +S +++LPG+ AG Y V++F+T FA + ET +L +E W++ GYF+R Sbjct: 150 DASIAARKWAGLLDDGKWDASWQSAATTFRAQLTLAQWTTTIRSVRQPLGGAASRTLQSAAQSKTLPGVLAGDYQVLQFQTSFATKPDAIETVVLSREQKGWRVSGYFIR 259
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Match: UPI0018CC5398 (DUF4019 domain-containing protein n=1 Tax=Herbaspirillum sp. RV1423 TaxID=1443993 RepID=UPI0018CC5398) HSP 1 Score: 52.0 bits (123), Expect = 1.220e-5 Identity = 35/102 (34.31%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 91 ARKWLTEIDRGQVEKAWAETSQLFQK--TAPDGARQLGLSRDETGLPRDRTEKSKRVTQSLPGLPAGSYTVVEFETRFARESYT--ETAILCQEGNWKIVGY 384 A +WL+ D Q ++ W + + QK + D A+ LG R E G + R + PGLPAG Y V F +RFAR + T + ++ G W VGY Sbjct: 38 ASQWLSLSDVNQSDRMWDGSGPIMQKNISKQDWAKYLGNLRGELGPLQGREWAQVARVVNPPGLPAGEYMNVMFNSRFARAATTVEKISLTLAGGKWVPVGY 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9535.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9535.1.1 >prot_P-wetherbeei_contig9535.1.1 ID=prot_P-wetherbeei_contig9535.1.1|Name=mRNA_P-wetherbeei_contig9535.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp MKRFLIVFMLLNGCTAPPHDDFDAIEASEAARKWLTEIDRGQVEKAWAETback to top mRNA from alignment at P-wetherbeei_contig9535:1475..1867+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9535.1.1 ID=mRNA_P-wetherbeei_contig9535.1.1|Name=mRNA_P-wetherbeei_contig9535.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig9535:1475..1867+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9535:1475..1867+ >mRNA_P-wetherbeei_contig9535.1.1 ID=mRNA_P-wetherbeei_contig9535.1.1|Name=mRNA_P-wetherbeei_contig9535.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig9535:1475..1867+ (Phaeothamnion wetherbeei SAG_119_79)back to top |