mRNA_P-wetherbeei_contig9410.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: A0A836CAC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC4_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.320e-78 Identity = 132/209 (63.16%), Postives = 164/209 (78.47%), Query Frame = 1 Query: 1 SRLDVLVTELLRAPDERFRAIAVNYRDVLLNDYYIVAMRARVARMESERERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAMEDMSRLPDKVRGMKPLLDRDFLSYLQHAIEVERGKIRAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIVANI 627 +RLD ++ EL RAP E AI Y DVLL+ YY++AMRARV R+E+E +R++L VN A+TLV ++A + QA E+Q+LEKIR ICE AM+DM+RLPDKVR MKPLL+ DF++YL +AIE ERG +RA G+DP REP+ WL+VLGVI++GV AEL KDVYLDVQAI YVLRM ERRALLE TI TLPSMDVRGFR+ A NI ++ Sbjct: 30 ARLDGMLYELGRAPAEMRPAILREYADVLLDPYYVLAMRARVPRLETEAQRALLQAVNAQATTLVGQLAGLKQAQEVQELEKIRAICETAMDDMARLPDKVRSMKPLLNADFVAYLAYAIEKERGALRAKGMDPDREPSRWLQVLGVIKQGVFAELEKDVYLDVQAIHYVLRMREPDERRALLEATIATLPSMDVRGFRRVARNIAEHV 238
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: A0A6H5KR11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR11_9PHAE) HSP 1 Score: 213 bits (543), Expect = 2.170e-60 Identity = 113/206 (54.85%), Postives = 146/206 (70.87%), Query Frame = 1 Query: 1 SRLDVLVTELLRAPDERFRAIAVNYRDVLLNDYYIVAMRARVARMESERERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAMEDMSRLPDKVRGMKPLLDRDFLSYLQHAIEVERGKIRAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIV 618 S +DVL+ EL+++P + + I +Y D+ LN YI+AMRAR+ + E ER + NQ A V+++A M Q LEMQQLEKIR ICEAA+EDM LPDK+R MKPLLD F++Y+ AI+ ER I GL+P REP+ WL+VLGVIQ+GV+AEL K V+ DV+ IS+VLRM ER ALL TI TLPSM +RGF++ A NIV Sbjct: 570 SSVDVLIAELVKSPKDLWNGITASYSDLYLNRCYILAMRARIPKSSRE-ERDAMIAANQAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGDAIQTEREAIEKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVELISHVLRMKEPEERLALLNITISTLPSMYIRGFKRTATNIV 774
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: A0A7S4D6V5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6V5_HETAK) HSP 1 Score: 199 bits (507), Expect = 2.470e-59 Identity = 101/207 (48.79%), Postives = 145/207 (70.05%), Query Frame = 1 Query: 4 RLDVLVTELLRAPDERFRAIAVNYRDVLLNDYYIVAMRARVARMESERERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAMEDMSRLPDKVRGMKPLLDRDFLSYLQHAIEVERGKIRAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIVAN 624 +++VLV EL APD+ F IA Y+DV+L+DY++ MR ++AR+E+ ++++ LA++N+ A L++E+A+ E QQL+K+ IC AM+DM +LP+KVRGMK D DF++YL AI ER KIRA LDP REP+ WL+VL ++++G+ EL KD++ V+ SYVLRMPS RR LL I LPS+DVR F+K N+V N Sbjct: 65 KMEVLVRELYAAPDDLFMPIASTYKDVILSDYFVALMREQLARVETAKQKATLAKLNRYAVNLLKELALAMGEHERQQLQKVAEICRVAMDDMRKLPEKVRGMKFFFDEDFVAYLLFAIREERKKIRAQALDPDREPSEWLQVLLILRKGIWRELQKDIHEHVEMASYVLRMPSAEARRLLLAEFIADLPSLDVRKFKKVLRNMVDN 271
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: A0A7S2B3W4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3W4_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.980e-49 Identity = 86/160 (53.75%), Postives = 114/160 (71.25%), Query Frame = 1 Query: 148 ERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAMEDMSRLPDKVRGMKPLLDRDFLSYLQHAIEVERGKIRAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIVANI 627 ER VL RVNQ A E+A M Q E QQ++KIR ICEAAMEDM LP+KVR MKPLLDRDF+ YL++A ER I A L P REPTTWL+V+ +IQ+GV AEL +D+++ ++ I Y+LRMP+ +R+L T+++LP+ DVR F++ NIV N+ Sbjct: 3 ERGVLGRVNQYAIACAEELAAMVQFNEEQQIDKIRLICEAAMEDMDSLPEKVRAMKPLLDRDFVGYLRYAEAKERDAIEAQFLSPDREPTTWLQVISLIQQGVYAELGRDIHIQLERIMYILRMPTLPTQRSLFNVTVNSLPTWDVRQFKETCQNIVDNL 162
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: D7G3H6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H6_ECTSI) HSP 1 Score: 179 bits (455), Expect = 1.160e-48 Identity = 93/160 (58.13%), Postives = 116/160 (72.50%), Query Frame = 1 Query: 139 SERERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAMEDMSRLPDKVRGMKPLLDRDFLSYLQHAIEVERGKIRAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIV 618 S ER + NQ A V+++A M Q LEMQQLEKIR ICEAA+EDM LPDK+R MKPLLD F++Y+ +AI+ ER + GL+P REP+ WL+VLGVIQ+GV+AEL K V+ DV+ IS+VLRM ER ALL TI TLPSM +RGF++ A NIV Sbjct: 352 SREERDAMIAANQAAVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAVDKRGLNPDREPSRWLQVLGVIQKGVMAELQKSVHQDVELISHVLRMKEPEERLALLNITISTLPSMYIRGFKRTATNIV 511
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: A0A7S2WL98_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL98_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.010e-45 Identity = 82/159 (51.57%), Postives = 110/159 (69.18%), Query Frame = 1 Query: 148 ERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAMEDMSRLPDKVRGMKPLLDRDFLSYLQHAIEVERGKIRAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIVAN 624 ER VLA++N+ A V ++ Q E QQLEKIR+ICE A++DMS+LP V+ M+PLLD+DF++YL +AI+ ER IR L+P EPT WL++LG+I+ GV AEL K + D++ I YVLRMP A +R LLE +D +P+ DVR F A NIV N Sbjct: 5 ERRVLAKINEYAVVCVEQMIEYMQFAEEQQLEKIRSICEVALDDMSKLPAAVKNMRPLLDQDFIAYLDYAIDKEREGIRGRNLNPDLEPTEWLQILGIIKNGVYAELGKGLKEDIKTIMYVLRMPDEATQRDLLEVIVDKMPTWDVRQFYHVATNIVDN 163
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: A0A448ZKR6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKR6_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.360e-40 Identity = 91/234 (38.89%), Postives = 136/234 (58.12%), Query Frame = 1 Query: 1 SRLDVLVTELLRAPDERFRAIAVNYRDVLLNDYYIVAMRARVARMES-----------------ERERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAM--------EDMSRLPDKVRGMKPLLDRDFLSYLQHAIEVERGKIRAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIVANI 627 SRL +L+ EL P+ERFR IA NY+D+LL++ ++ +R R+ M E+ER +L ++ A L++E +G LE QLE +R+IC+ AM E + L D VR M+PLLD F++YL++A+ E K+ GL + WL VL ++Q+GV AE+AK + ++ I YV+RM S +RR LLE+ ID +P+MDVR F + DNIV ++ Sbjct: 911 SRLQILLKELWDQPEERFREIASNYKDLLLSERFVGLIRDRLTAMADRDLDALRRDDESLREPHEKEREILGQLVVYAQALLKETRALGAELEAHQLEIVRSICKVAMDPAHTTEEETANALSDAVRDMRPLLDDTFVAYLKYAVAEEEAKLARAGLLDDPDYNQWLFVLNIVQQGVYAEIAKGINRYIEHIWYVIRMESPQQRRRLLESLIDDMPTMDVRPFVQVVDNIVGSL 1144
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: A0A7S1GP29_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GP29_CYCTE) HSP 1 Score: 136 bits (342), Expect = 2.140e-35 Identity = 87/233 (37.34%), Postives = 130/233 (55.79%), Query Frame = 1 Query: 19 VTELLRAPDERFRAIAVNYRDVLLNDYYIVAMRARVARM---------------------ESERERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAM--------EDMSRLPDKVRGMKPLLDRDFLSYLQHAIEVERGKI-RAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIVANI 627 V EL P++RFR +A NY+D++L+D ++ ++ R+ M ERER +L ++ A LV+E +G LE Q+E IR+IC+ AM E L D VR M+ L D F++Y+++A+ E G++ RAG LD + WL VL ++Q+GV E+AK + ++ I YVLRM + ERR LLE ID LP+MDVR F + DNI +++ Sbjct: 1 VDELWDMPEDRFREVAENYKDLMLSDNFVGLLKERMEEMVQRDLDAMRRGEDGEDTELKKRHEREREILGQLVIYAQLLVKETQALGAELEAHQIEVIRSICKVAMDPKHTTEEETAIALSDAVREMRLLFDDAFVAYIKYAVAEEEGRLARAGQLDDP-DHNEWLFVLKIVQQGVYREIAKGINRYLEHIWYVLRMHTADERRDLLELFIDDLPTMDVRPFVQVVDNIASSL 232
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: A0A7S0GG33_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GG33_9STRA) HSP 1 Score: 129 bits (323), Expect = 5.080e-32 Identity = 78/202 (38.61%), Postives = 111/202 (54.95%), Query Frame = 1 Query: 46 ERFRAIAVNYRDVLLNDYYIVAMRARVARMESERERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAMEDMSR--------LPDKVRGMKPLLDRDFLSYLQHAIEVERGKIRAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIVANI 627 ER + I RD +N + + V + ER++L ++ Q A+ L++E G LE +QLE IR IC AM+ L D VR M+PLL+ DF+SYL +AI E G++ G E W VL ++Q+GV AEL + + + YVLRM +R+ER+ LL I+ LPS+DVR FRK DNIV ++ Sbjct: 92 ERLQLIKQRDRDASINKT-LTSEEKSVLQATHTLERTILTKLIQAATLLLKETRAAGAELEAEQLETIRNICRVAMDPNHATEQDAAFALSDTVRDMRPLLNEDFISYLSYAIAEEEGRLLRRGYLEDPEQNRWWMVLQIVQKGVYAELGRSLNRYTDHVFYVLRMKTRSERKELLRELINDLPSLDVRPFRKVVDNIVKSL 292
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Match: A0A1G4GVB4_PLAVI (NudC domain-containing protein 1 n=7 Tax=Plasmodium vivax TaxID=5855 RepID=A0A1G4GVB4_PLAVI) HSP 1 Score: 128 bits (321), Expect = 1.480e-30 Identity = 72/210 (34.29%), Postives = 122/210 (58.10%), Query Frame = 1 Query: 4 RLDVLVTELLRAPDERFRAIAVNYRDVLLNDYYIVAMRARV--ARMESERERSVLARVNQLASTLVREVAMMGQALEMQQLEKIRTICEAAMEDMSRLPDKVRGMKPLLDRDFLSYLQHAIEVERGKIRAGGLDPQREPTTWLKVLGVIQRGVIAELAKDVYLDVQAISYVLRMPSRAERRALLETTIDTLPSMDVRGFRKAADNIVANI 627 RL+ L++EL A ++ I NYRDVLL+D Y MR R+ A ++ E+ +L VN A +L ++ ++ + E + L+KI+ ICE A+ D L + + MKPLLD FL Y++HAI +E+ KI+ D + +P+ WL +L +IQ+G+ + L KD++ DV I+ ++ + R+ +L T + ++P D F+ I ++ Sbjct: 663 RLNTLISELAYAEEDMIPTICNNYRDVLLSDEYACLMRIRLLEAPPKNAEEKRILKIVNSFALSLYDDIKIIMEHEEREHLKKIQLICEKAIHDEKGLNEFIESMKPLLDYSFLGYIKHAIRMEKRKIQMERKDFREQPSDWLIILMIIQKGIYSILEKDIWEDVINITTIICQEQPSVRKTMLTTMVASMPKADWIFFKDVIKTIYKSV 872 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9410.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9410.2.1 >prot_P-wetherbeei_contig9410.2.1 ID=prot_P-wetherbeei_contig9410.2.1|Name=mRNA_P-wetherbeei_contig9410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=209bp SRLDVLVTELLRAPDERFRAIAVNYRDVLLNDYYIVAMRARVARMESEREback to top mRNA from alignment at P-wetherbeei_contig9410:1239..2412+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9410.2.1 ID=mRNA_P-wetherbeei_contig9410.2.1|Name=mRNA_P-wetherbeei_contig9410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1174bp|location=Sequence derived from alignment at P-wetherbeei_contig9410:1239..2412+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9410:1239..2412+ >mRNA_P-wetherbeei_contig9410.2.1 ID=mRNA_P-wetherbeei_contig9410.2.1|Name=mRNA_P-wetherbeei_contig9410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig9410:1239..2412+ (Phaeothamnion wetherbeei SAG_119_79)back to top |