prot_P-wetherbeei_contig937.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig937.2.1
Unique Nameprot_P-wetherbeei_contig937.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length1146
Homology
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: A0A835YU77_9STRA (Nuclear condensing complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU77_9STRA)

HSP 1 Score: 281 bits (720), Expect = 5.300e-75
Identity = 275/848 (32.43%), Postives = 398/848 (46.93%), Query Frame = 0
Query:    2 VLHVAKREPAVELIIDFAVEAI-----SRGSARLLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQCPDEPDDMA-TAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLA-------------------WGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDASLRLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLVEEVLPDAATLCNYIETLSVAD-LENDDEIAFVARQLFELVVVSGSLEETGRRRLVGLLRALLAEVCFPDDLEEPCILALAKASVSERDFARLMYDIFNDLNDVITGSADASVIVGDTQNGYNAEGGGGLGGVGAKGGGEEDALAAEKRRHAAQIALLSRIQVVLQNTKHRWDDDGTFWQLERDIICAIDS-----------------NSCDLRAQGMVCLGKLCPLDFIVAQQRRELLLLAAGSAAEALSVRAAALQALSDASLAFG-----------VRFVGMDG----KVVGLLISLV-------------NDRAEDKR--LVAVAAEACGKLVLLGRLP-PAVALDALAAIAALYFEPGTAADPATHAETFREPRSSDSXXXXXXXXXXXXXXXXANRRAAGASGDGGKGGANAQVSKQSFGMPLPVLTLPPLPHGNEWVELGTPVRAQREIASFLGFFAVDGPSHRALLRDCVPRVLRMARERAMRLAADGDGK 775
            VL V KREPA E ++ F   A        G   L    L FLVS      +  R RAC +   VLE L  D D+  +L+ A+      R++D VPAVR+ A   L RLQ  +     A TAAL+RAA  D+SK+VR+AA+ S+  S+AVLP ++ R  D   DV   A+  +AD+  +  L+  +R+ L+                    WGL D +   PAV AA R M+C  WL  AG   V L+GLLDV++    E     +L+TLL+  L   AA     D A+ AL   +GL+ + DAAALR++ A     A  +T E+ALFAR++ E VT D  LSAA+RE  +  +LP+   LC ++E ++  D L+      F+ +Q+ ++  +    EE GR RLV LLRALL +   P DL E  + ALA A+ S+ +F R++ ++ +DL++    S + S  + D+ +  ++E  GG+ G  A GG EE     E+RR   Q+  L  + V+L++T  R   DGT   L+  I+ A+ S                     +R  G+  LGK   L    A+  R LL+  AG+ AE L VR  ALQ + D +L FG              +  DG    +++  ++S               ND  E+    + A+AAE C KL+   R+  PA+    LA + A+YF PG+ ADPAT +   ++    +S                                + A            V     L        LG+PVR Q+ +A+F   FA  G   RA L   VP  L    +       DGDG+
Sbjct:   80 VLTVFKREPAAERLVAFIARAACLPGGDEGDVELAAFVLEFLVSRAGAPDRAARLRACHITAAVLEGLGADADIAEDLWQAVTAAMAARVSDKVPAVRAAACAALLRLQYAEAAGGCAATAALLRAARADASKDVRKAAMQSLQISKAVLPDIMRRTRDTSEDVRRTAYQVLADKAPLVYLTLPQRVALVXXXXXXXXXXXXXXXXXXVEWGLKDRS---PAVVAACRGMVCRTWLRGAG-GAVPLLGLLDVIQ---FEDAAESVLKTLLETGL---AAERGRSDAALSALG--LGLSQE-DAAALRNVAATRVNFAEGLTPESALFARVQAEVVTADAALSAADREERLGTILPETPHLCAFVEAVAQQDGLQESLGQLFILQQMLKMARMVDFSEEAGRHRLVTLLRALLLDPFSPSDLVEVAMRALASANPSKGEFVRVVAELISDLSE----SPNESESLNDSDDAPDSEEDGGVRGPDADGGEEE-----EERRVMRQVRSLEMVTVLLEHTT-RTLADGTLASLDMVILPAVRSPHGAPVQXXXXXXXXXXXXXAVREYGLAALGKYALLGEEAARANRLLLVAVAGNTAEELPVRGNALQTVQDLALIFGDAVLXXXXXXXXXXLAPDGGAALRLIARMLSAAATVAGDAPDDDNFNDAEEEVNPAMAAIAAEGCAKLLFARRVADPAL----LARLLAMYFTPGSPADPATLSRMVQQEERDESDYAGFTWQC-----------------------STALAPXXXXXXXXXVEGFESLDQAYTATALGSPVRLQQVLATFFPCFAAAGGDARAALSAAVPLALAQLGD----AERDGDGE 873          
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: D7FVL8_ECTSI (Cnd3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL8_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 2.110e-28
Identity = 196/717 (27.34%), Postives = 299/717 (41.70%), Query Frame = 0
Query:    2 VLHVAKREPAVELIIDF-AVEAISRGSARLLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQC-----PDEP---DDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLE-DPTNERIGVIMLRTLLDASLRLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLV---EEVLPDAATLCNYIETLSVADLENDDEIAFVARQLFELVVVSGSLEETGRRRLVGLLRALLAEVCFPDDLEEPCILALAKASVSERDFARLMYDI--------FNDLNDVITGSADASVIVGDTQNGYNAEGGGGLGG----------------VGAKGGGEED------ALAAEKRRHAAQIA--------------LLSRIQVVLQNTKHRWDDDGTFWQLERDIICAIDSNSCD---------------LRAQGMVCLGKLCPLDFIVAQQRRELLLLAAGSAAEALSVRAAALQALSDASLAFGVRFVGMDGKVVGLLISLVNDRAEDKRLVAVAAEACGKLVL--LGRLPPAVALDALAAIAALYFEPGTAADP 644
            +L V+KR+P VE ++ F ++ A S  +A L    + FL+       K VR+R CQL G +     +   +D E  D  +   L RL D V AVR  A   L+  Q       DE    DD   + L+RA  +DSS +VR+AALA++T +  +   L+ R +D    V  AAF  + + V+  LLS  +R+ L+  GL+D ++   AV  A R M+C  W   A YDP+ L+  L+V+  +  +       L T+L  ++ L         + +VA E +  ++ D                 A + ++  +  +L ++  T       A R RLV   +++L D   L + +E+  VA        A   R + ELV     L  T     V      L    F   +E    L         R FA +   +          D    I G A  + +  +      + GGG                     GA+G GE +      A A  + + +  +A              +L  + V+L  TK     D T    E D+I  +   + +               LR Q +  LGK C L    A +   +LL  A    EA  VRA A+QALSD SL F    +G  G V+ +   ++ DR+ ++ + AVAAEA  +L+   L   P     + LA +  LYFE G+AADP
Sbjct:   70 ILVVSKRDPGVERLVHFVSLAAGSDVNASLFDRTVEFLLLHSGAADKAVRFRCCQLLGTLTTEYTQRPQVDEEDLDCFVDVLLPRLRDKVAAVRVQAVGALRPFQFGLEAGDDEDALKDDKVRSELVRAMVSDSSPDVRQAALAAVTKTVGMFDQLVLRTQDVKESVRRAAFRTLGEDVSSKLLSPQQRVTLVKRGLSDSSE---AVVDACRFMVCVHWFRDAEYDPMELLQRLNVVNVEVMSAGEKETRLETILTDTMTLCG------QIEVVAQEVKELVSKDVG------------DNDARVEYQVFVLEQL-LKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQNVSL-NASFASIMEG---LGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPMACMSEEGGKAVESSGGGSKRADPPSSEDEFMDALSHHSGAEGEGESNGDALRQATAGLEEKESTPVAPAGDSEQDMRRLFRILDILSVLLSKTKRTLARDATLTAFE-DVIMDVFKWTAEVLPTLIPDLQYFGPTLREQAVQTLGKYCLLGEAAAVRHSPMLLKVALCEDEATGVRACAMQALSDLSLIFRSAVLGSTGDVLNMFADILKDRSANRGMTAVAAEAISRLLFFELSHDP-----ELLARLVVLYFEKGSAADP 754          
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: A0A151P9N0_ALLMI (Condensin complex subunit 3 isoform B n=12 Tax=Crocodylia TaxID=1294634 RepID=A0A151P9N0_ALLMI)

HSP 1 Score: 132 bits (331), Expect = 2.080e-27
Identity = 124/409 (30.32%), Postives = 194/409 (47.43%), Query Frame = 0
Query:    5 VAKREPAVELIIDFAVEAIS-------------RGSARLLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQCPDEPDDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDASLRLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLVEEVLPDAAT----LCNYIETLSVADLENDDEIA---------FVARQLFELVVVSGSLEETGRRRLVGLLRALL 387
            V KREPAVE +I+FA + IS               +  LL  +  FL+   +     VR+RACQL  ++LE +PE+  +D ELFD +    L+RL D  P VR  A   L RLQ P + +             DS+ EVRRA L+ I  S   LP ++ R+ D    V   A++ +A++V + +LS ++R+ LL  GL D +    AV+   ++ L  +WL V   D + L+  LDV   P    + V ML                    AM +L +   L  +      R ++    PV  E+T E AL+ R   E + K K     E E L+E ++P+ A     L +Y++++ V   +  ++ +         F+ +QL  L+    + EE GR+RL+ +L+ +L
Sbjct:   58 VYKREPAVEQVINFAAKFISSLYQANEEGVTEEEENNSLLNYSFNFLLKSHNANSHAVRFRACQLVNKLLENMPENAQIDDELFDKINEAMLIRLKDKFPNVRIQAVLALCRLQDPKDENCSVVNVYNTLLENDSNSEVRRAVLSCIAVSAQTLPKIVGRIMDVKEAVRKLAYEVLAEKVPMKVLSIAQRVKLLQQGLNDRSD---AVKEVVKKKLLQSWLRVTEGDVLELLHRLDVEHCP---EVAVPMLN-------------------AMFSLSSISDLVQNCKNLDSRKMI----PVE-ELTAENALYWRSLCEYL-KSK---GEEGEALLERIVPEPAIYAEYLLSYLQSIPVLSEKQREDFSCIEHLMTKEFIGQQLSLLIGCMDTTEEGGRKRLLAVLQEIL 432          
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: UPI0003C8ED4D (condensin complex subunit 3 n=1 Tax=Tupaia chinensis TaxID=246437 RepID=UPI0003C8ED4D)

HSP 1 Score: 131 bits (330), Expect = 2.800e-27
Identity = 124/447 (27.74%), Postives = 207/447 (46.31%), Query Frame = 0
Query:    5 VAKREPAVELIIDFAVEAIS--RGSAR----------LLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQCPDEPDDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDAS-LRLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLVEEVLPD----AATLCNYIETLSVADLENDDEIA---------FVARQLFELVVVSGSLEETGRRRLVGLLRALLAEVCFPDDLEEPCILALAKASVSERDFARLMYDIFNDL 425
            V KREPAVE +++FA + ++    SA           +L   + FL+         VR+RACQ+  ++L  +PE+  +D +LFD +    L+RL D +P VR  A   L RLQ P + +     A       DS+ EVRRA L+ I  S   LP ++ R +D    V   A+  +A++V++  LS ++R+ LL  GL+D +    AV+ A ++ L  AWL +A    ++L+  LDV     +  + V +L  L   + LR   A           +  EM                        +T E AL+ R+  E + K K     E E L+EE+LP+    A  L +YI+++ V + E   + +         F+ +QL  ++    + EE GR+RL+ +L+ +L     P  L    +  L      +    +++ +I +++
Sbjct:   88 VYKREPAVERVVEFAAKFVTSFHQSAEXXXXXXXXGGILNYLITFLLESHEANSNAVRFRACQMVNKLLRSMPENAQIDDDLFDRINEAMLVRLRDKIPNVRIQAVLALSRLQDPKDDECPVVNAYATFIENDSNPEVRRAVLSCIVPSAKTLPKIVGRTKDVKEAVRKLAYQVLAEKVHMRALSIAQRVMLLQQGLSDRSD---AVRQAVQKHLLQAWLRLADGSVLQLLHWLDVEH---SAEVAVSVLSALFAVTPLRELVAVCKGGGDGRKLIPVEM------------------------LTPEIALYWRVLCEYL-KSK---GDEGEALLEEILPEPVVYAEYLLSYIQSIPVVNEEQKGDFSYIGHLMTKEFIGQQLILIIKSLDTSEEGGRKRLLAILQEVLTLPTTPISLVSFLVERLLHIITDDNQRTQIITEIISEI 500          
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: A0A6I9KGL3_CHRAS (condensin complex subunit 3 n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9KGL3_CHRAS)

HSP 1 Score: 131 bits (329), Expect = 3.560e-27
Identity = 123/418 (29.43%), Postives = 192/418 (45.93%), Query Frame = 0
Query:    5 VAKREPAVELIIDFAVEAIS-------------RGSARLLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQCPDEPDDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDASLRLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLVEEVLPD----AATLCNYIETLSVADLENDDEIA---------FVARQLFELVVVSGSLEETGRRRLVGLLRALLAEVCFPDDL 396
            V KREPAVE +I+FA + ++                  +L     FL+         VR+R CQL  ++L  +PE+  +D +LFD +    L+RL D +P VR  A   L RLQ P   D     A       DS+ EVRRA L+ I  S   LP ++ R +D   DV   A+  +A++V++  +S ++R+ LL  GL D +    AV+ A ++ L   WL     D + L+  LDV     +  + V +L  L   +                 L   +GL  + DA   R L+    PV   +T E AL+ R+  E + K K     + E  +E++LP+    A  L +YI+++ V + E     A         F+ +QL  ++    + EE GR+RL+ +L+ +L     P  L
Sbjct:   58 VYKREPAVERVIEFAAKFVTSFHQSEMEEDEDDEEDGGILNDLFTFLLKSHEANSNAVRFRVCQLVNKLLGSMPENAQIDDDLFDKINEAMLIRLKDKIPNVRIQAVLALSRLQDPKNDDCPVVNAYTTLIENDSNSEVRRAVLSCIAPSAKTLPKIVGRTKDVKEDVRKLAYQVLAEKVHMKAMSIAQRVMLLQQGLNDRSA---AVKQAMQKHLLQGWLRFTEGDILALLHRLDV---ENSSDVAVSVLNALFSVT----------------PLNELVGLCRNNDA---RQLI----PVET-LTPEIALYWRVLCEYL-KSK---GDDGEEFLEQILPEPVVYAEYLLSYIQSIPVVNDEQRSNFAYIGNLMTKEFIGQQLILIIKSLDTNEEGGRKRLLAILQEILTLPTTPISL 441          
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: A0A8C3T9R9_CHESE (Non-SMC condensin I complex subunit G n=3 Tax=Chelydra serpentina TaxID=8475 RepID=A0A8C3T9R9_CHESE)

HSP 1 Score: 130 bits (328), Expect = 3.930e-27
Identity = 121/407 (29.73%), Postives = 191/407 (46.93%), Query Frame = 0
Query:    7 KREPAVELIIDFAVEAIS-------------RGSARLLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQCPDEPDDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDASLRLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLVEEVLPDAAT----LCNYIETLSVADLENDDEIA---------FVARQLFELVVVSGSLEETGRRRLVGLLRALL 387
            KREPAVE +I+FA + ++                  LL     FL+   S     VR R CQL  ++L  +PE+  +D +LFD +    L+RL D +P VR  A   L RLQ P++ +             DSS EVRRA L+ I  S   LP ++ R  D    V   A++ +A++V++  LS ++R+ LL  GL D +    AV+   ++ L  AWL +   D + L+  LDV   P   ++ V +L                    AM +L T   L  +      R L+    PV  ++T E+AL+ R   E + K K     E E L+E++L + AT    L +Y++ + V   E  ++ +         F+ +QL  ++    + EE GR+RL+ +L+ +L
Sbjct:   77 KREPAVEQVINFAAKFVTSFDQLEKEDGNEEEEETPLLSYLFNFLLESHSANSHAVRLRVCQLVNKLLGSMPENAQIDDDLFDKINEAMLIRLKDKIPNVRIQAVLALARLQDPNDENCPVVNVYNALLENDSSSEVRRAVLSCIAPSAKTLPKIVGRTMDVKEAVRKLAYEVLAEKVHMRALSIAQRVKLLQQGLNDRSD---AVKEVVQKKLLQAWLRLTEGDVLELLHRLDVENCP---KVAVSVLN-------------------AMFSLSTLSDLVQNCKNLDNRKLI----PVE-DLTAESALYWRSLCEYL-KSK---GEEGEALIEQILSEPATYADYLLSYLQNMPVLSEEQREDFSCIENLLTKEFIGQQLILIIGCMDTTEEGGRKRLLAVLQEIL 449          
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: A0A8B7V390_CASCN (condensin complex subunit 3 n=2 Tax=Castor canadensis TaxID=51338 RepID=A0A8B7V390_CASCN)

HSP 1 Score: 130 bits (328), Expect = 4.640e-27
Identity = 123/460 (26.74%), Postives = 207/460 (45.00%), Query Frame = 0
Query:    5 VAKREPAVELIIDFAVEAISR--------------GSARLLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQCPDEPDDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDASLRLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLVEEVLPD----AATLCNYIETLSVADLENDDEIA---------FVARQLFELVVVSGSLEETGRRRLVGLLRALLAEVCFPDDLEEPCILALAKASVSERDFARLMYDIFNDLN-DVITGSADAS 436
            V KREPAVE +I+FA + ++                   +L   L FL+         VR+R CQL  ++L  +PE+  +D +LFD +    L RL D +P VR  A   L RLQ P + +     A       DS+ EVRRA L+ I  S   LP ++ER +D   +V   A+  VA++V++  +S ++R+ L   GL D +    AV+ A ++ L  +WL     + + L+  LDV E+ +   + V+     +     L     D D   ++ +ET                          +T E AL+ R   E + K K     E E  +E++LP+    A  L +YI+++ V + E   + +         F+ +QL  ++    + EE GR+RL+ +L+  L     P  L    +  L    V +    +++ +I +++   ++T + D S
Sbjct:   58 VYKREPAVERVIEFAAKFVTSFHQSDVKDEXXXXXXXGGILNYLLTFLLKCHEANSNAVRFRVCQLINKLLGSMPENAQIDDDLFDRINEAMLTRLKDKIPNVRIQAVLALSRLQDPKDDECPVVNAYATLIENDSNPEVRRAVLSCIAPSAKTLPKIVERTKDVKENVRKLAYQIVAEKVHMRAMSIAQRVMLFQQGLNDRSD---AVKQAMQKHLLQSWLRFTEGNILELLHRLDV-ENSSEVAVSVLNALFSMTPLNELVVICKDNDGRKLIPVET--------------------------LTPEIALYWRALCEYL-KSK---GDEGEEFLEQILPEPVMYAEYLLSYIQSIPVVNEEQRSDFSYIENLMTKEFIGQQLILIIKSLDTSEEGGRKRLLAVLQETLTLPTTPIALVSFLVERLLHIIVDDNKRTQIVTEIISEIRAPIVTVAVDPS 483          
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: A0A671DTK4_RHIFE (Non-SMC condensin I complex subunit G n=5 Tax=Microchiroptera TaxID=30560 RepID=A0A671DTK4_RHIFE)

HSP 1 Score: 130 bits (327), Expect = 6.120e-27
Identity = 117/446 (26.23%), Postives = 203/446 (45.52%), Query Frame = 0
Query:    5 VAKREPAVELIIDFAVEAIS------------RGSARLLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQCPDEPDDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDASLRLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLVEEVLPD----AATLCNYIETLSVADLENDDEIA---------FVARQLFELVVVSGSLEETGRRRLVGLLRALLAEVCFPDDLEEPCILALAKASVSERDFARLMYDIFNDL 425
            V KREP VE +IDFA + ++                 +L     FL+         VR+R CQL  ++L  +PE+  +D +LFD +    L+RL D +P VR  A   L RLQ P + +   T A       DS+ EVRRA L+ I  S   LP ++ R +D    V   A+  +A++V++  +S ++R+ LL  GL D +    AV+ A+++ L   WL     + + L+  LDV E+ +   + V+     +     L     + D   ++ +ET                          +T E AL+ R+  E + K K     E E  +E++LP+    A  L +YI+++ V + E  ++ +         F+ +QL  ++    + EE GR+RL+ +L+ +L     P  L    +  L    + +    +++ +I +++
Sbjct:   58 VYKREPVVERVIDFAAKFVTSFHQSDMEDDEEEEDGGILNYLFTFLLKSHEANSNAVRFRVCQLINKLLGSMPENAQIDDDLFDKINKAMLIRLKDKIPNVRIQAVLALSRLQDPKDDECPVTNAYATLIENDSNPEVRRAVLSCIAPSAKTLPKIVGRTKDVKEAVRKLAYQVLAEKVHMRAMSIAQRVMLLQQGLNDRSD---AVKQATKKHLLQGWLRFTEGNILELLHRLDV-ENSSEVAVSVLSALFSVTPLNELAEVCKNSDGRKLIPVET--------------------------LTPEIALYWRILCEYL-KSK---GDEGEEFLEQILPEPVVYAEYLLSYIQSIPVVNDEQRNDFSCIENLMTKEFIGQQLILIIKSLDTNEEGGRKRLLAILQEILTLPTTPISLVSFLVERLLNIIIDDNKRIQIVTEIISEI 469          
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: UPI000328D436 (condensin complex subunit 3 isoform X1 n=2 Tax=Dasypus novemcinctus TaxID=9361 RepID=UPI000328D436)

HSP 1 Score: 130 bits (327), Expect = 6.130e-27
Identity = 121/445 (27.19%), Postives = 202/445 (45.39%), Query Frame = 0
Query:    5 VAKREPAVELIIDFAVEAIS-----------RGSARLLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQCPDEPDDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDASLRLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLVEEVLPD----AATLCNYIETLSVADLENDDEIA---------FVARQLFELVVVSGSLEETGRRRLVGLLRALLAEVCFPDDLEEPCILALAKASVSERDFARLMYDIFNDL 425
            V KREPAVE +I+FA + ++                +L     FL+         VR+R CQL  ++L  +PE+  +D +LFD +    L+RL D +P VR  A   L RLQ P + D     A       DS+ EVRRA L+ I  S   LP ++ R +D    V   A+  +A++V++  +S ++R+ LL  GL D +    AV+ A ++ L   WL     D + L+  LDV     +  + + +L  L                  M+ L   +G+  + D    R L+    PV   +T E AL+ R+  E +     L   E E  +E++LP+    A  L +YI+ + V + E   + +         F+ +QL  ++    + EE GR+RL+ +L+  L     P  L    +  L    + +    +++ +I +++
Sbjct:   58 VYKREPAVERVIEFAAKFVTSFHQSEMEDDEEEDGGILNYLFTFLLKSHEANSNAVRFRVCQLINKLLGSMPENAQIDDDLFDKINEAMLVRLKDKIPNVRIQAVLALSRLQDPKDDDCPVVNAYATLIENDSNPEVRRAVLSCIAPSAKTLPKIVGRTKDVKEAVRKLAYQVLAEKVHMRAMSIAQRVMLLQQGLNDRSD---AVKQAMKKHLLQGWLRFTEGDILELLHRLDV---ENSSEVAISVLNALFS----------------MIPLNELVGMCKNNDG---RKLI----PVET-LTPEIALYWRVLCEYLK----LKGEEGEEFLEKILPEPVVYAEYLLSYIQNIPVVNDEQRGDFSYIGNLMTKEFIGQQLILIIKSLDTNEEGGRKRLLAILQETLTLPTTPVSLISFLVERLLHIVIDDNRRTQIVTEIISEI 468          
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Match: G1PNK7_MYOLU (Non-SMC condensin I complex subunit G n=15 Tax=Microchiroptera TaxID=30560 RepID=G1PNK7_MYOLU)

HSP 1 Score: 129 bits (325), Expect = 1.060e-26
Identity = 118/447 (26.40%), Postives = 201/447 (44.97%), Query Frame = 0
Query:    5 VAKREPAVELIIDFA-----------VEAISRGSARLLQGALGFLVSIMSVQGKGVRYRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARVLKRLQCPDEPDDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLERVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQAASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDASL--RLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEAALFARLRVEAVTKDKLLSAAERERLVEEVLPD----AATLCNYIETLSVADLENDDEIA---------FVARQLFELVVVSGSLEETGRRRLVGLLRALLAEVCFPDDLEEPCILALAKASVSERDFARLMYDIFNDL 425
            V KREP VE +I+FA           VE        LL     FL+         VR+R CQL  ++L  +PE+  +D +LFD +    L+RL D +P VR  A   L RLQ P + +     A +     DS+ EVRRA L+ I  S   L  ++ R +D    V   A+  + ++V++  +S ++R+ LL  GL D A+   AV+ A+++ L   WL  +  + + L+  LDV     +  + V +L  L   +    L     + DD  ++ +ET                          +T E AL+ R+  E +         E E  +E++LP+    A  L +YI+++ V D E  ++ +         F+ +QL  ++    + EE GR+RL+ +L+ +L     P  L    +  L    + +    +++ +I +++
Sbjct:   58 VYKREPVVERVIEFAAKFVTSFHQSDVEGDEEEDGGLLNYLCTFLLKSHEANSNAVRFRVCQLINKLLGNMPENAQIDDDLFDKINEAMLIRLKDKIPNVRIQAVLALSRLQDPKDDECPVANAYVTLIENDSNPEVRRAVLSCIVPSAKTLSKIVGRTKDVKEAVRKLAYQVLGEKVHMRAMSIAQRVMLLQQGLNDRAE---AVKQATQKHLLQGWLRFSEGNILELLHRLDV---ENSSEVAVSVLNALFSVTPLNELAEICKNNDDRKLIPVET--------------------------LTPENALYWRVLCEYLRS----KGDEGEEFLEQILPEPVIFAEYLLSYIQSIPVVDDERRNDFSYIGHLMTKEFIGQQLILIIKSLDTNEEGGRKRLLAILQEILTIPTTPMSLISFLVERLLHIIIDDNKRTQIVTEIISEI 468          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig937.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YU77_9STRA5.300e-7532.43Nuclear condensing complex subunit n=1 Tax=Tribone... [more]
D7FVL8_ECTSI2.110e-2827.34Cnd3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A151P9N0_ALLMI2.080e-2730.32Condensin complex subunit 3 isoform B n=12 Tax=Cro... [more]
UPI0003C8ED4D2.800e-2727.74condensin complex subunit 3 n=1 Tax=Tupaia chinens... [more]
A0A6I9KGL3_CHRAS3.560e-2729.43condensin complex subunit 3 n=1 Tax=Chrysochloris ... [more]
A0A8C3T9R9_CHESE3.930e-2729.73Non-SMC condensin I complex subunit G n=3 Tax=Chel... [more]
A0A8B7V390_CASCN4.640e-2726.74condensin complex subunit 3 n=2 Tax=Castor canaden... [more]
A0A671DTK4_RHIFE6.120e-2726.23Non-SMC condensin I complex subunit G n=5 Tax=Micr... [more]
UPI000328D4366.130e-2727.19condensin complex subunit 3 isoform X1 n=2 Tax=Das... [more]
G1PNK7_MYOLU1.060e-2626.40Non-SMC condensin I complex subunit G n=15 Tax=Mic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025977Nuclear condensin complex subunit 3, C-terminal domainPFAMPF12719Cnd3coord: 482..644
e-value: 8.2E-14
score: 51.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 12..180
e-value: 8.0E-9
score: 37.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 645..696
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 992..1120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 810..865
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 648..662
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1085..1099
NoneNo IPR availablePANTHERPTHR14418:SF5CONDENSIN COMPLEX SUBUNIT 3coord: 2..645
IPR027165Condensin complex subunit 3PANTHERPTHR14418CONDENSIN COMPLEX SUBUNIT 3-RELATEDcoord: 2..645
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 24..615

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig937contigP-wetherbeei_contig937:1744..7163 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig937.2.1mRNA_P-wetherbeei_contig937.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig937 1668..7448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig937.2.1 ID=prot_P-wetherbeei_contig937.2.1|Name=mRNA_P-wetherbeei_contig937.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1146bp
MVLHVAKREPAVELIIDFAVEAISRGSARLLQGALGFLVSIMSVQGKGVR
YRACQLAGRVLEVLPEDCDLDPELFDALLHGALLRLTDVVPAVRSHAARV
LKRLQCPDEPDDMATAALMRAAATDSSKEVRRAALASITASRAVLPHLLE
RVEDAHPDVAAAAFDRVADQVNVGLLSTSERLYLLAWGLADGAQPPPAVQ
AASRRMLCGAWLPVAGYDPVRLVGLLDVLEDPTNERIGVIMLRTLLDASL
RLRAAAADEDDVAMVALETEMGLAPDADAAALRDLVAFPAPVAAEMTFEA
ALFARLRVEAVTKDKLLSAAERERLVEEVLPDAATLCNYIETLSVADLEN
DDEIAFVARQLFELVVVSGSLEETGRRRLVGLLRALLAEVCFPDDLEEPC
ILALAKASVSERDFARLMYDIFNDLNDVITGSADASVIVGDTQNGYNAEG
GGGLGGVGAKGGGEEDALAAEKRRHAAQIALLSRIQVVLQNTKHRWDDDG
TFWQLERDIICAIDSNSCDLRAQGMVCLGKLCPLDFIVAQQRRELLLLAA
GSAAEALSVRAAALQALSDASLAFGVRFVGMDGKVVGLLISLVNDRAEDK
RLVAVAAEACGKLVLLGRLPPAVALDALAAIAALYFEPGTAADPATHAET
FREPRSSDSSSDGESDSDGGSAGAAANRRAAGASGDGGKGGANAQVSKQS
FGMPLPVLTLPPLPHGNEWVELGTPVRAQREIASFLGFFAVDGPSHRALL
RDCVPRVLRMARERAMRLAADGDGKNGSGDESGTIDMEQVIKQVALLILS
ANPAVTPAAPGANVAGGGEGDEEGEASDASDDATWTDTKKQVKGKRQQKQ
PKKLPRKKGKEPETAAASTADLALLGQLAMALCADLEGMVGDTACASVAE
QVVRGLVALPLPTAEQDTIKHLRDLVALVQRALPSGKRAKKTSKARAAGE
GGEIAALLAMYAAALAEADLTPDVPLSEAACAALDGNGDGLPTGATTGAT
DDEAEDGGAEDKTGGGVSGGAATTLSNEGDDNSASSLEEEEAAMLAPVRV
TSSGSSVRLRLPRASTGGRAAATSRYKEASSSGSEGSEESEEDGEDSSQE
RDGSQEVAVGSPHPSPAASFAAVAMKLRHCSARLGDGDGGGLKKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025977Cnd3_C
IPR011989ARM-like
IPR027165CND3
IPR016024ARM-type_fold