prot_P-wetherbeei_contig9298.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9298.1.1
Unique Nameprot_P-wetherbeei_contig9298.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length266
Homology
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BLAST of mRNA_P-wetherbeei_contig9298.1.1 vs. uniprot
Match: A0A835ZC43_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC43_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.170e-12
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0 
Query:   42 FQMGVSPSRS--TSPRGMRSACNFCHTKRIKCNRDEGAT---KCQQCVQRGMVCKFSPKEKTGPKP 102
            F M  +P +   TSPR +RSAC++CHTKRIKC RD+      +CQQCV+R + CKFS KEKTGPKP
Sbjct:   15 FPMRCTPGQQGGTSPRLLRSACDWCHTKRIKCKRDDSEPLGGRCQQCVRRNIECKFSYKEKTGPKP 80
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BLAST of mRNA_P-wetherbeei_contig9298.1.1 vs. uniprot
Match: A0A835YH07_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH07_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.340e-10
Identity = 31/46 (67.39%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:   57 MRSACNFCHTKRIKCNRDEGATKCQQCVQRGMVCKFSPKEKTGPKP 102
            +R+AC++CH+KRIKC   +G  KCQQC+QRG+ CKFS KEKTGPKP
Sbjct:   61 LRNACDWCHSKRIKCRHTDGP-KCQQCLQRGLECKFSVKEKTGPKP 105
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BLAST of mRNA_P-wetherbeei_contig9298.1.1 vs. uniprot
Match: A0A835Z4W4_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.570e-7
Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:   50 RSTSPRGMRSACNFCHTKRIKCNRDEGATKCQQCVQRGMVCKFSPKEKTGPKP 102
            R+  P  ++   +FCH+KRIKC +  G +KCQQC QR + CKFS KEKTGPKP
Sbjct:  708 RAGQPLTVKRCGDFCHSKRIKC-KSVGGSKCQQCTQRLIECKFSVKEKTGPKP 759
[Close]
BLAST of mRNA_P-wetherbeei_contig9298.1.1 vs. uniprot
Match: A0A0U5GQM4_ASPCI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Aspergillus calidoustus TaxID=454130 RepID=A0A0U5GQM4_ASPCI)

HSP 1 Score: 61.2 bits (147), Expect = 3.680e-7
Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0 
Query:   48 PSRSTSPRGMRSACNFCHTKRIKCNRDEGATKCQQCVQRGMVCKFSPKEKTGPK 101
            P RS  PR  RSACN CHT++++C R  G ++C++C++    C+F+P+ K G K
Sbjct:    4 PHRSNQPRKTRSACNKCHTQKLRCTRKPGQSRCERCLRLNAECRFAPRAKRGSK 57
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9298.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZC43_9STRA2.170e-1259.09Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A835YH07_9STRA3.340e-1067.39Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A835Z4W4_9STRA2.570e-756.60RNB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A0U5GQM4_ASPCI3.680e-744.44Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 55..101
e-value: 7.4E-5
score: 32.1
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 60..95
e-value: 6.1E-6
score: 26.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 60..90
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 60..92
score: 9.424
IPR001138Zn(2)-C6 fungal-type DNA-binding domainCDDcd00067GAL4coord: 57..93
e-value: 1.09813E-6
score: 42.2654
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 55..112
e-value: 3.9E-7
score: 31.9
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 53..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9298contigP-wetherbeei_contig9298:1229..2412 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9298.1.1mRNA_P-wetherbeei_contig9298.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9298 887..2412 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9298.1.1 ID=prot_P-wetherbeei_contig9298.1.1|Name=mRNA_P-wetherbeei_contig9298.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
MEGFPQSMMPSLMVPSMFSAGMLPTLSTATPPPTPGGGGQKFQMGVSPSR
STSPRGMRSACNFCHTKRIKCNRDEGATKCQQCVQRGMVCKFSPKEKTGP
KPNKDKPTTRPKGDSRSPSPSPVGHSRDGHGRGMPMQIPFGASGAMGMGG
MGVMRMGGPGGIGGGGGGGYPDVKRIPGNMAYGGAVKDNFVSGHHSGVST
PEMSPSPRAAELSPTNSVGGGASGFGGGGASGFGGGGGAASGSGPFSATA
TTEEQQIRERQFLITY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf