mRNA_P-wetherbeei_contig8557.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8557.1.1
Unique NamemRNA_P-wetherbeei_contig8557.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: UPI00199565A2 (FkbM family methyltransferase n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI00199565A2)

HSP 1 Score: 359 bits (922), Expect = 1.680e-119
Identity = 170/252 (67.46%), Postives = 212/252 (84.13%), Query Frame = 1
Query:    1 LSLAEYELLEPHQTVDDGVTEVAYATPNVFTKWRVDSLFTKEPDTIEWIRGFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLNGLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTKLSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLKSVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVFVR 756
            L+L +YE ++P + V D   EV YATPNV T+WRVD+LF+KEP+TIEWI GF+ADEV +D+GANVG+YTIWAAKTRGVR +AFEPESQNYA+L +NIVLN L++ V AYC AL+D AGYSLLHL+QFQ G S HS+GEKV++ LE+RD+++SQGC++ TLD+LV +GV+P P+HIKIDVDG EHKVL G   +LAD  L+SVL+EINTNLE HR+I+TDM+A GF YSE+QVA+A RTEG F G+GNYVF R
Sbjct:    5 LTLEQYETMDPQRCVRDRGVEVIYATPNVATEWRVDTLFSKEPETIEWIAGFQADEVLIDVGANVGIYTIWAAKTRGVRVYAFEPESQNYAVLYKNIVLNQLSKQVVAYCAALTDEAGYSLLHLNQFQAGRSNHSYGEKVDYQLEYRDSEVSQGCVAATLDSLVKTGVVPMPDHIKIDVDGFEHKVLTGSASILADRHLRSVLIEINTNLEQHRKIVTDMRAYGFTYSEEQVARALRTEGPFSGIGNYVFSR 256          
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: A0A4R6WWE0_9PROT (FkbM family methyltransferase n=2 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WWE0_9PROT)

HSP 1 Score: 274 bits (701), Expect = 6.290e-86
Identity = 141/270 (52.22%), Postives = 171/270 (63.33%), Query Frame = 1
Query:    7 LAEYELLEPHQTVDDGVTEVA--------------------YATPNVFTKWRVDSLFTKEPDTIEWIRGFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLNGLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTKLSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLKSVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVFVR 756
            LAE E   P+  +D  V E                      YA P     WRV +LFTKEP TIEW+   +     +D+GANVGMYT++AA  R  R FAFEPESQNYALLCRNIV N L+E VTA+C ALSD A +S +HLS F IG SCHSF E V+  LE R +   QGC S  +D L+A GV+P P+HIK+DVDG EHKV+AG  E L +P +KS+++EIN +L  HR I+  +  LGF Y   QVA+A RTEGAF GVG YVF R
Sbjct:    5 LAETEPRRPNMQIDPRVIEAVKRYDAGMPVIGIPYKGKKLRYALPGKTPLWRVQTLFTKEPSTIEWLESIEMGGTLLDVGANVGMYTVFAAVIRDARVFAFEPESQNYALLCRNIVSNSLSERVTAFCCALSDEAKFSTIHLSDFTIGGSCHSFDESVDFKLEQRKSPFIQGCFSARIDQLIADGVMPVPSHIKLDVDGFEHKVIAGAAETLRNPAVKSLIIEINPHLAEHRGILDHLSELGFSYDPAQVARAARTEGAFTGVGEYVFRR 274          
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: UPI00199A42C9 (FkbM family methyltransferase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI00199A42C9)

HSP 1 Score: 269 bits (688), Expect = 2.710e-84
Identity = 136/254 (53.54%), Postives = 174/254 (68.50%), Query Frame = 1
Query:    1 LSLAEYELLEPHQTVDDGVTEVAYATPNVFTKWRVDSLFTKEPDTIEWIRGFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLNGLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTK--LSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLKSVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVFVR 756
            ++L +YE L P   V  G  +V YATP++ TKWRVD+LF KEP T+EWI GF+  EV VD+GANVGMYT+WAA+TRGVR +AFEPES NYALL RNIV NGL   V AYC ALSD +G+  LHLSQF  G SCHS  EK++    HR  K   +QGC+S ++D LV +G +  P++IKIDVDG E KV+ G  E +    L+S+L+E+N NL  H  ++ ++ ALGF +   QV +A+R  G F G   YVF R
Sbjct:    1 MNLEDYEKLNPRCVVRSGDIDVVYATPSLATKWRVDTLFEKEPVTLEWIAGFQQGEVLVDVGANVGMYTVWAARTRGVRVYAFEPESLNYALLNRNIVANGLAGQVMAYCAALSDRSGFGELHLSQFMAGGSCHSLDEKMDP--YHRPAKPVYTQGCVSTSVDELVRAGRVDPPHYIKIDVDGFEPKVVLGAAETVRSGTLRSLLIEVNQNLPDHMEMVRELNALGFRHDPAQVERAERKSGPFTGCAEYVFKR 252          
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: A0A3N5X944_9PROT (FkbM family methyltransferase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5X944_9PROT)

HSP 1 Score: 269 bits (687), Expect = 4.090e-84
Identity = 128/252 (50.79%), Postives = 173/252 (68.65%), Query Frame = 1
Query:    1 LSLAEYELLEPHQTVDDGVTEVAYATPNVFTKWRVDSLFTKEPDTIEWIRGFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLNGLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTKLSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLKSVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVFVR 756
            L+L +YE L P   ++     + ++TP   T+WRV+S+ +KEP T+EWI  F+ DE+ +D GANVGMYT+WAA TR VR +AFEPESQNYALL RNI  N L   V AYC+ LSD +G   LH++  ++G SCH+ GE ++   +    +  QGC++ TLD LVA G +P PNHIKIDVDG E KV+AG R  LADPR++S+L+E N NLE HR ++ ++ ALG  +   QV +A+R +G FKGV  +VF R
Sbjct:    3 LTLEQYEQLNPRCEIEHDGVNMVFSTPGTLTRWRVESIHSKEPWTLEWIASFQPDEILLDCGANVGMYTVWAAATRRVRVYAFEPESQNYALLNRNIQNNRLQHRVKAYCMGLSDQSGLFDLHMADMRVGGSCHAVGEALDFEHKPLQAQFVQGCVAGTLDELVAGGAVPVPNHIKIDVDGFEPKVIAGARATLADPRVRSLLIETNPNLEDHRAMVRELNALGLLHDPAQVRRAERKDGTFKGVAEHVFRR 254          
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: A0A7C7CG52_9FLAO (FkbM family methyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7C7CG52_9FLAO)

HSP 1 Score: 269 bits (687), Expect = 4.230e-84
Identity = 131/252 (51.98%), Postives = 173/252 (68.65%), Query Frame = 1
Query:    1 LSLAEYELLEPHQTVDDGVTEVAYATPNVFTKWRVDSLFTKEPDTIEWIRGFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLNGLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTKLSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLKSVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVFVR 756
            ++L +YE ++P   +  G   V++ TP+   KWRV++L +KEP TIEWI  FK DE+ +DIGANVGMYTIWAA+TRG + FAFEPESQNYALL RNIV+N L   V AYC A+SD+ G+  L+L +F  GSS ++FGEK++          SQGC S T+D LV SGVLP P ++KIDVDG+E KV+ G +E + D   KS+LVEIN NLE H   +  ++  GF +S+ QV  + R +G FKG+  YVF R
Sbjct:    3 ITLKQYESIDPIYQLSIGNVSVSFCTPSEGMKWRVETLLSKEPATIEWISEFKRDEILLDIGANVGMYTIWAAQTRGAKVFAFEPESQNYALLNRNIVINQLGNQVCAYCTAISDTVGFDYLYLGRFSAGSSANTFGEKIDFKYRPLHPAYSQGCFSTTIDHLVTSGVLPIPQYMKIDVDGLEPKVIRGAKETIKDENFKSILVEINQNLEDHMETVKFLENCGFVFSQDQVDSSTRKDGPFKGIAEYVFRR 254          
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: A0A1Y0I9F6_9GAMM (FkbM family methyltransferase n=1 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0I9F6_9GAMM)

HSP 1 Score: 272 bits (695), Expect = 1.320e-81
Identity = 129/233 (55.36%), Postives = 170/233 (72.96%), Query Frame = 1
Query:   58 TEVAYATPNVFTKWRVDSLFTKEPDTIEWIRGFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLNGLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTKLSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLKSVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVFVR 756
            TE+ Y   N   KWR +SL+TKEPDT+ WI  FK ++V VDIGANVGMYT+ AAK  G R +AFEPESQNYALL RNIV N + +   A+C+AL+D +    L+LS F +G SCH+FG+ ++ NL+ R T L+QGC+S  LD LVA GV+P P+HIKIDVDG+EH VL G  + +++P+LKS+LVE+NTNL  H+ +I  +  LGF + ++QV  A R EG FKGVGN++F R
Sbjct:   16 TELIYEASNDMVKWRAESLYTKEPDTVVWISQFKENDVLVDIGANVGMYTVLAAKGMGARVYAFEPESQNYALLNRNIVYNQIQDKCVAFCMALTDESKVDRLYLSTFGLGGSCHTFGQDIDFNLQQRSTHLAQGCVSFQLDELVAKGVIPQPDHIKIDVDGLEHCVLQGALDAISNPKLKSILVELNTNLPEHQSLINQLAELGFVFDQRQVGVAIRQEGTFKGVGNFIFYR 248          
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: B1XXZ0_LEPCP (Methyltransferase FkbM family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) TaxID=395495 RepID=B1XXZ0_LEPCP)

HSP 1 Score: 268 bits (684), Expect = 2.410e-78
Identity = 137/261 (52.49%), Postives = 181/261 (69.35%), Query Frame = 1
Query:   43 VDDGVTEVAYATPNVFTKWRVDSLFTKEPDTIEWIRGFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLNGLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTKLSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLKSVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVFVR*RTRDVPDRQRADTRVSVRAYLR 825
            VDD    + + TPN  T+WRV+SLFTKEPDTI W++  K+ EV VD+GANVGMY+++ A  RGV+  AFEPESQNYALL  NI LNGL+  V AY LALSD++G   L+LS F  G SCHSFGE+V  +L+ R +  +QG  S TLD LV++G +P P+HIK+DVDG EHKV+AG    L DP++K+VLVE+NT+L+ HR++I  +  LGF +  QQ   A R  GAF+GVG ++F R   + V   QR   R+ + +  R
Sbjct:  207 VDDK--RLKFHTPNRMTQWRVESLFTKEPDTIAWLKQMKSGEVLVDVGANVGMYSVFGAVCRGVQVHAFEPESQNYALLNSNIALNGLSGRVVAYPLALSDTSGADKLYLSDFSPGGSCHSFGEQVGFDLKPRGSAFAQGAFSVTLDQLVSAGSVPVPDHIKLDVDGFEHKVIAGALTTLRDPKVKTVLVELNTHLDEHRQVIQTLHELGFSHDPQQAQGALRASGAFEGVGEFIFTRQLEKKVELIQRTTLRLPMSSRAR 465          
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: A0A2E6X5L8_9PROT (Methyltransferase FkbM n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E6X5L8_9PROT)

HSP 1 Score: 254 bits (648), Expect = 3.050e-78
Identity = 126/252 (50.00%), Postives = 170/252 (67.46%), Query Frame = 1
Query:    1 LSLAEYELLEPHQTVDDGVTEVAYATPNVFTKWRVDSLFTKEPDTIEWIRGFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLNGLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTKLSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLKSVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVFVR 756
            +++ EYE LEP  T+     EV Y  PN  T WR +SL +KEPDT+ WI  F A++V  D+GANVGMY+IWAA T+     AFEPE+QNYA+L +NI LN L E   AY +ALSD  G+  LHLS F IG SCH+FGE ++H L+ R + L QG  S T+D +++S  +P P  IKIDVDGIEHKV+ G ++ L D R++S+LVE+NTNL +H  +I  ++  GF    + +  + R +G FKGVGN++F R
Sbjct:    4 MTIEEYEKLEPIFTLKYKNVEVLYNVPNRQTLWRAESLNSKEPDTLAWIDNFDAEDVLFDVGANVGMYSIWAAATKKCSVVAFEPEAQNYAILNKNIGLNNLRESTIAYPVALSDGTGFGDLHLSDFVIGGSCHTFGEALDHRLQPRKSWLRQGSFSTTIDRIISSKSVPFPTQIKIDVDGIEHKVIEGAKKTLKDDRVRSILVELNTNLSIHNNLIKSLERKGFRLWRETLDISIRKKGEFKGVGNHIFQR 255          
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: A0A2S6TCY1_9PROT (Methyltransf_21 domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha3_Bin3 TaxID=2013069 RepID=A0A2S6TCY1_9PROT)

HSP 1 Score: 259 bits (661), Expect = 1.930e-75
Identity = 121/232 (52.16%), Postives = 161/232 (69.40%), Query Frame = 1
Query:   61 EVAYATPNVFTKWRVDSLFTKEPDTIEWIRGFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLNGLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTKLSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLKSVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVFVR 756
            ++ Y TPN  TKWRVDS FTKEPDTI WI     +E+ +D+GANVGMYTI A+  RG++ FAFEPESQNY+LL RNI LNG+++ VTAYC  LSD +G    +LS F +G SCH+ GE ++ NL  +     QGC   TLD ++ S  +P P HIKIDVDG EHKV+ G ++ L  P +KSVL+E+N +LE HR +   M+ LG+ Y E Q  ++++ +GAF G+GN +F R
Sbjct:  168 DLCYHTPNRMTKWRVDSFFTKEPDTIRWISCMTDEEILLDVGANVGMYTIMASVGRGLKVFAFEPESQNYSLLNRNIYLNGVSDLVTAYCAGLSDHSGLDKFYLSNFSLGGSCHAVGESLDFNLIPQQADYVQGCTVYTLDEMIESNAIPVPTHIKIDVDGFEHKVITGMQKTLTKPEVKSVLIELNPHLEEHRGLFQKMEELGYRYFESQAEESRQPDGAFAGIGNVIFYR 399          
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Match: UPI0019AC2E28 (Uncharacterized protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019AC2E28)

HSP 1 Score: 239 bits (611), Expect = 1.000e-72
Identity = 113/237 (47.68%), Postives = 156/237 (65.82%), Query Frame = 2
Query:  743 MSSSAEEHVMYQIANAPIREYPYAHIYVENVFPDDFYAAMRASWPDQSALITIADTGRVAKGAYPERFVMPFNQSEVNKLNEAHRPFWNELASWLITQRFLTAMIDKFEPYVKERFGDELYECVFENDSLIVRDLTNYSIGPHTDSPSRLLSMLFYCPPDETHKHLGTSLYVPCDPAFRCAGGPHYPHQLFHKVRTMEYKPNSLFAFVKNDHSFHGVEPIGDQNVLRDILLYDIRVR 1453
            MSSSAE+H +YQIANAP+RE+PY HI V  VF  D Y  M+ +      +  I +   V K    +R V    + ++  L + HR FW+EL  WL+   F   + +KF  ++ ERFGD   +  F N++L+V D   YS+GPH+D+PS+++++LFY P D++  HLGTS+Y P DP+FRC GGPHYP  LF +V TM Y  N+LFAFVK D+SFHGVEPI D++  R +LLYD++ R
Sbjct:    1 MSSSAEQHTLYQIANAPLREHPYPHILVHEVFEPDLYRRMQENLLPPELMRPIKEERAVGKAYSDDRHVFTLAKDKIGALPQPHRAFWDELTGWLLNAPFAVTLFNKFGRHIHERFGDP--QPPFYNEALLVDDRVRYSLGPHSDTPSKVITLLFYLPADDSRSHLGTSIYTPRDPSFRCPGGPHYPFDLFDRVVTMPYVSNTLFAFVKTDNSFHGVEPIRDKDYRRHLLLYDVKCR 235          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8557.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00199565A21.680e-11967.46FkbM family methyltransferase n=1 Tax=Pyrinomonada... [more]
A0A4R6WWE0_9PROT6.290e-8652.22FkbM family methyltransferase n=2 Tax=Dongia mobil... [more]
UPI00199A42C92.710e-8453.54FkbM family methyltransferase n=1 Tax=Candidatus P... [more]
A0A3N5X944_9PROT4.090e-8450.79FkbM family methyltransferase n=1 Tax=Betaproteoba... [more]
A0A7C7CG52_9FLAO4.230e-8451.98FkbM family methyltransferase n=1 Tax=Flavobacteri... [more]
A0A1Y0I9F6_9GAMM1.320e-8155.36FkbM family methyltransferase n=1 Tax=Oleiphilus m... [more]
B1XXZ0_LEPCP2.410e-7852.49Methyltransferase FkbM family n=1 Tax=Leptothrix c... [more]
A0A2E6X5L8_9PROT3.050e-7850.00Methyltransferase FkbM n=1 Tax=Magnetovibrio sp. T... [more]
A0A2S6TCY1_9PROT1.930e-7552.16Methyltransf_21 domain-containing protein (Fragmen... [more]
UPI0019AC2E281.000e-7247.68Uncharacterized protein n=1 Tax=Candidatus Parcuba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8557contigP-wetherbeei_contig8557:181..1642 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog395495.Lcho_0484
PFAMsGlycos_transf_2,Methyltransf_11,Methyltransf_21,Methyltransf_23,Methyltransf_25
Model size1462
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.59e-81
EggNOG OGsCOG2227@1|root,COG2520@1|root,COG2227@2|Bacteria,COG2520@2|Bacteria
DescriptiontRNA (guanine(37)-N(1))-methyltransferase activity
Cds size759
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187046.912742-CDS-P-wetherbeei_contig8557:180..9391683187046.912742-CDS-P-wetherbeei_contig8557:180..939Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8557 181..939 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187046.9241862-UTR-P-wetherbeei_contig8557:939..16421683187046.9241862-UTR-P-wetherbeei_contig8557:939..1642Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8557 940..1642 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8557.1.1prot_P-wetherbeei_contig8557.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8557 181..939 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8557.1.1

>prot_P-wetherbeei_contig8557.1.1 ID=prot_P-wetherbeei_contig8557.1.1|Name=mRNA_P-wetherbeei_contig8557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=253bp
LSLAEYELLEPHQTVDDGVTEVAYATPNVFTKWRVDSLFTKEPDTIEWIR
GFKADEVFVDIGANVGMYTIWAAKTRGVRTFAFEPESQNYALLCRNIVLN
GLTEYVTAYCLALSDSAGYSLLHLSQFQIGSSCHSFGEKVNHNLEHRDTK
LSQGCISNTLDALVASGVLPTPNHIKIDVDGIEHKVLAGCREVLADPRLK
SVLVEINTNLELHRRIITDMKALGFDYSEQQVAQAQRTEGAFKGVGNYVF
VR*
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mRNA from alignment at P-wetherbeei_contig8557:181..1642+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8557.1.1 ID=mRNA_P-wetherbeei_contig8557.1.1|Name=mRNA_P-wetherbeei_contig8557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1462bp|location=Sequence derived from alignment at P-wetherbeei_contig8557:181..1642+ (Phaeothamnion wetherbeei SAG_119_79)
CTTTCGCTCGCCGAATACGAATTGCTGGAGCCGCACCAGACTGTCGATGA CGGCGTGACGGAGGTCGCTTATGCGACTCCCAACGTATTCACCAAATGGC GCGTGGATTCGCTGTTTACCAAGGAACCCGACACCATCGAATGGATCAGG GGGTTTAAGGCGGATGAGGTTTTCGTCGACATCGGCGCCAACGTCGGCAT GTACACGATATGGGCCGCCAAGACCCGCGGGGTGCGCACTTTCGCATTTG AGCCGGAGTCGCAGAACTACGCCCTGCTTTGCCGCAATATAGTGCTCAAC GGGTTGACTGAATATGTCACCGCCTACTGCCTTGCGCTGAGCGACTCCGC CGGTTATTCGCTCCTGCATCTGAGCCAGTTTCAGATCGGCAGTTCGTGTC ACTCGTTCGGCGAGAAGGTTAACCACAATCTCGAGCACCGCGACACCAAA CTTTCGCAAGGCTGCATCTCGAATACGCTCGATGCGCTGGTGGCGAGCGG CGTGCTGCCGACGCCCAATCACATCAAGATCGATGTGGACGGAATCGAGC ACAAGGTGCTCGCCGGTTGCCGCGAGGTACTCGCCGACCCCAGGCTGAAA TCGGTGCTGGTGGAAATCAACACCAACCTGGAGCTACACCGTAGAATAAT TACCGATATGAAAGCGCTCGGGTTCGACTATTCCGAGCAGCAGGTGGCGC AGGCGCAACGCACTGAAGGCGCATTCAAGGGCGTCGGGAACTATGTCTTC GTCCGCTGAAGAACACGTGATGTACCAGATCGCCAACGCGCCGATACGCG AGTATCCGTACGCGCATATCTACGTTGAGAACGTATTCCCGGATGATTTC TACGCGGCAATGCGCGCCAGCTGGCCTGACCAATCCGCGCTGATCACTAT TGCCGACACCGGGCGGGTAGCCAAGGGCGCGTACCCCGAGCGCTTTGTCA TGCCGTTCAACCAATCCGAGGTCAACAAGCTCAATGAAGCTCACCGCCCC TTCTGGAACGAACTGGCGAGCTGGTTGATCACGCAACGATTTTTGACCGC AATGATAGACAAGTTCGAACCATACGTTAAAGAACGGTTCGGAGATGAGT TGTACGAGTGTGTTTTCGAAAACGATTCGCTCATTGTGCGCGACCTGACC AATTACAGCATCGGTCCACACACCGATTCACCGAGCCGCCTGCTGTCAAT GCTGTTTTACTGTCCACCTGACGAAACGCACAAACACCTCGGCACTTCAC TTTATGTGCCGTGCGATCCTGCATTCCGGTGCGCGGGCGGTCCGCATTAC CCCCACCAGCTCTTCCACAAAGTCCGCACCATGGAATACAAACCCAACTC GCTGTTCGCTTTCGTCAAAAACGACCACTCGTTTCACGGCGTGGAGCCGA TTGGCGATCAAAACGTGCTGCGCGACATCCTGCTCTACGACATCCGCGTG CGGCGGCCCAAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8557:181..1642+

>mRNA_P-wetherbeei_contig8557.1.1 ID=mRNA_P-wetherbeei_contig8557.1.1|Name=mRNA_P-wetherbeei_contig8557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=759bp|location=Sequence derived from alignment at P-wetherbeei_contig8557:181..1642+ (Phaeothamnion wetherbeei SAG_119_79)
CTTTCGCTCGCCGAATACGAATTGCTGGAGCCGCACCAGACTGTCGATGA
CGGCGTGACGGAGGTCGCTTATGCGACTCCCAACGTATTCACCAAATGGC
GCGTGGATTCGCTGTTTACCAAGGAACCCGACACCATCGAATGGATCAGG
GGGTTTAAGGCGGATGAGGTTTTCGTCGACATCGGCGCCAACGTCGGCAT
GTACACGATATGGGCCGCCAAGACCCGCGGGGTGCGCACTTTCGCATTTG
AGCCGGAGTCGCAGAACTACGCCCTGCTTTGCCGCAATATAGTGCTCAAC
GGGTTGACTGAATATGTCACCGCCTACTGCCTTGCGCTGAGCGACTCCGC
CGGTTATTCGCTCCTGCATCTGAGCCAGTTTCAGATCGGCAGTTCGTGTC
ACTCGTTCGGCGAGAAGGTTAACCACAATCTCGAGCACCGCGACACCAAA
CTTTCGCAAGGCTGCATCTCGAATACGCTCGATGCGCTGGTGGCGAGCGG
CGTGCTGCCGACGCCCAATCACATCAAGATCGATGTGGACGGAATCGAGC
ACAAGGTGCTCGCCGGTTGCCGCGAGGTACTCGCCGACCCCAGGCTGAAA
TCGGTGCTGGTGGAAATCAACACCAACCTGGAGCTACACCGTAGAATAAT
TACCGATATGAAAGCGCTCGGGTTCGACTATTCCGAGCAGCAGGTGGCGC
AGGCGCAACGCACTGAAGGCGCATTCAAGGGCGTCGGGAACTATGTCTTC
GTCCGCTGA
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