mRNA_P-wetherbeei_contig848.6.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: D7FRE2_ECTSI (Checkpoint protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE2_ECTSI) HSP 1 Score: 204 bits (520), Expect = 8.270e-63 Identity = 111/193 (57.51%), Postives = 138/193 (71.50%), Query Frame = 1
Query: 1 GVVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
GV+G +EKIG+AC+VHL+ +V + Q S + + VYAEL +D+LF EYRI S+A N I+FE NA++LL+AL S K +P CQIKL KR GQPCLSIETR ++ + V+PA E Y P V PQVQLELPR RS+RTVVDRMK+IDK+L +DA MGGQLV RVEK +ATIKTFY+ L PR
Sbjct: 17 GVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQDMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEI----EVVHDIPVKVMPANEAEYYLPPKVHSPQVQLELPRQRSLRTVVDRMKAIDKFLFVDADMGGQLVFRVEK--ADATIKTFYSNLTPR 203
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A7S3YAY1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAY1_HETAK) HSP 1 Score: 155 bits (393), Expect = 2.050e-44 Identity = 83/193 (43.01%), Postives = 123/193 (63.73%), Query Frame = 1
Query: 1 GVVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
G++ +EK+ C+++L+ + + + S QDD+ V++E+ ++ LF +YRI S ++NCI+ E+ L RAL S + AP CQ+KL KR G+PCL++ETR ++ V + P AP VP PQVQLELPRGRS RTV+DR+K I+++++IDA M G + RV+ T A IKTFY+ L PR
Sbjct: 18 GLISILEKVSQVCVIYLTESSMRISIKES-QDDIQVFSEISQERLFTDYRIESLSNNCILLEVGTANLGRALASGRRAPACQLKLAKRGGRPCLAVETRALEVDI---AHDLPVKLLRPGDVRFHL-APEVPRPQVQLELPRGRSFRTVIDRVKGINQHVYIDADMSGTITFRVQ--TDNAVIKTFYSNLTPR 203
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A7S2SUZ2_9STRA (Checkpoint protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUZ2_9STRA) HSP 1 Score: 145 bits (365), Expect = 7.000e-39 Identity = 80/195 (41.03%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 1 GVVGTMEKIGSACIVHLSPEKVWMCAQ--ASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
GV T+EKIG +VHLS + +C + + DD+ ++ L++ LF ++RI SQ+ NCI+ ++ LL AL S +NAP CQ+KLTKR GQ L +ETR ++ + V+ A E+ Y P VP PQVQLELP R+++TV+DR+K+I +Y+++ M G L LR E T I+T+++ L PR
Sbjct: 60 GVAATLEKIGPLGVVHLSDTSIQLCIRNDSGQGDDVLAFSALEQKELFHDWRIESQSGNCILLQLTLQNLLDALHSARNAPQCQLKLTKRNGQAALCLETRALEVDVIHD----IPVTVMRASEYQYYCPPDVPQPQVQLELPMSRNLKTVIDRLKNISRYIYLHGEMTGALTLRAE--TDSLVIQTYFSNLRPR 248
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A4D9CSQ4_9STRA (Checkpoint protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSQ4_9STRA) HSP 1 Score: 135 bits (340), Expect = 9.770e-36 Identity = 72/193 (37.31%), Postives = 115/193 (59.59%), Query Frame = 1
Query: 1 GVVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
GV E+ G +C+++LS + + D++ ++E++++ +F EYRIAS A+N I+FEI + L++A +S K A +IKL KR GQPC+ +E R DM + V+ A + Y P V P+VQLELP RS+RTV++R K +D++ +D M G L LR++ + ++TFY+ L+PR
Sbjct: 17 GVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRIKLAKRAGQPCICLEARALDMELLHE----VPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLERFKIMDRFCFVDGDMSGALRLRLQND--RCHVQTFYSNLIPR 203
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A7R9U1B3_9STRA (Checkpoint protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1B3_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.480e-26 Identity = 59/120 (49.17%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 220 SVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
S + AP+CQ+KLTKR GQPCL +ETR ++ + VL A E Y P VP P VQLEL + R +RT+VDR+K DKYL+ID++M G + LRV+ +GE T+KTF+ L PR
Sbjct: 2 SGRTAPLCQLKLTKRGGQPCLCLETRALEVDVTHD----IPVKVLKASEIEAYAPPEVPSPTVQLELMQSRQLRTIVDRLKVFDKYLYIDSSMAGNMTLRVQ--SGEVTVKTFFPNLTPR 115
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: W7TDG5_9STRA (Checkpoint protein hus1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDG5_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.040e-24 Identity = 56/151 (37.09%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 1 GVVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVD 453
GV E+ G +C+++LS + + D++ ++E++++ +F EYRIAS A+N I+FEI + L++A +S K A ++KL KR GQPC+ +E R DM + V+ A + Y P V P+VQLELP RS+RTV++
Sbjct: 17 GVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHE----VPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A1Y1X7Q4_9FUNG (Checkpoint protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X7Q4_9FUNG) HSP 1 Score: 96.7 bits (239), Expect = 9.170e-21 Identity = 60/193 (31.09%), Postives = 102/193 (52.85%), Query Frame = 1
Query: 13 TMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLW------VLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLV 573
++EK+ C++ + +K+++ ++ V+ ++ DLLFEE+ I S +N I E+ ++R L S + A KLTK+ G P LS + M+ RG +L VL +Y+ P VP P V + +P SVRT++DRMKS+ YL I A G+ +L++E T +++T++ L+
Sbjct: 19 SVEKLNKTCVIKFTKDKIYLIVSKIELTELQVWGQVAVDLLFEEFIIESANNNEIWIELRTDQVIRVLKSAQAAIDVYCKLTKKTGLPSLSFN--IKSMY---RGDNPVLLVQDIPIRVLNLYHINEYKEPMVPQPHVHILMPPLVSVRTIIDRMKSMSNYLTISANFNGEFILKIE--TEAVSVETYFKDLI 204
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A1Y3MS75_PIRSE (Uncharacterized protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MS75_PIRSE) HSP 1 Score: 94.0 bits (232), Expect = 1.540e-20 Identity = 60/193 (31.09%), Postives = 102/193 (52.85%), Query Frame = 1
Query: 13 TMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLW------VLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLV 573
++EK+ C++ + +KV++ ++ V+ ++ +LLFEE+ I S +N I E+ ++R L S ++A KLTK+ G P LS + +F RG +L VL +Y+ P VP P V + +P SVRT++DRMKS+ YL I A G+ L++E T +++T++ L+
Sbjct: 7 SVEKLNKTCVLKFTRDKVFLIVSKIELTELQVWGQVAVNLLFEEFIIESANNNEIWIEVRTDQIIRVLKSAQSAIDVYCKLTKKTGLPSLSFN--IKSIF---RGDNPVLLVQDIPIRVLNLYHINEYKEPMVPQPHVHILMPPLVSVRTIIDRMKSMSNYLTISANYNGEFTLKIE--TESVSVETYFKDLI 192
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A1X7UEC4_AMPQE (Checkpoint protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UEC4_AMPQE) HSP 1 Score: 93.2 bits (230), Expect = 1.320e-19 Identity = 64/190 (33.68%), Postives = 98/190 (51.58%), Query Frame = 1
Query: 4 VVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQAD-NCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGL 570
VV T+ K C++ LS KV C S + + ++ EL + F EYRI + + N I E+ L RAL A ++KLTKR G L + + NR + ++P + A YQ P +P V + LP + V+T++DRMKS+D Y+ + A M G+L +R+E +T AT T++ L
Sbjct: 19 VVATLAKNVKVCVLRLSAGKV--CFVISGKGSINMWCELNQSKFFSEYRIEGRDEHNEIFLEVQMEQLARALRHTSTAVSVKMKLTKRNGAYLLIDIIQATVTGGNRNVVHEVPVNIVPQRLWADYQEPDMPDIDVSIFLPPLKQVKTIIDRMKSLDNYITLSANMSGELNIRIETSTVTAT--TYFKNL 204
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A1Y1VN73_9FUNG (Checkpoint protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VN73_9FUNG) HSP 1 Score: 93.2 bits (230), Expect = 1.440e-19 Identity = 58/193 (30.05%), Postives = 103/193 (53.37%), Query Frame = 1
Query: 13 TMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLW------VLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLV 573
++EK+ C++ + +K+++ ++ V+ ++ +LLFE++ I S +N I E+ ++R L S ++A KLTK+ G P LS + +F RG +L VL ++Y+ P VP P V + +P SVRT++DRMKS+ YL I A G+ L++E T +++T++ L+
Sbjct: 4 SVEKLNKTCVLKFTRDKIFLIVSKIELTELQVWGQVAINLLFEDFIIESANNNEIWLEVRTDQIIRVLKSAQSAIDVYCKLTKKTGLPSLSFN--IKSIF---RGDNPVLLVQDIPIRVLNMYHISEYKEPMVPQPHVHILMPPLVSVRTIIDRMKSMSNYLTISANYNGEFTLKIE--TESVSVETYFKDLI 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig848.6.2 >prot_P-wetherbeei_contig848.6.2 ID=prot_P-wetherbeei_contig848.6.2|Name=mRNA_P-wetherbeei_contig848.6.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp MEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQAback to top mRNA from alignment at P-wetherbeei_contig848:7207..8286+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig848.6.2 ID=mRNA_P-wetherbeei_contig848.6.2|Name=mRNA_P-wetherbeei_contig848.6.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1080bp|location=Sequence derived from alignment at P-wetherbeei_contig848:7207..8286+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig848:7207..8286+ >mRNA_P-wetherbeei_contig848.6.2 ID=mRNA_P-wetherbeei_contig848.6.2|Name=mRNA_P-wetherbeei_contig848.6.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig848:7207..8286+ (Phaeothamnion wetherbeei SAG_119_79)back to top |