mRNA_P-wetherbeei_contig848.6.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig848.6.2
Unique NamemRNA_P-wetherbeei_contig848.6.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: D7FRE2_ECTSI (Checkpoint protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE2_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 8.270e-63
Identity = 111/193 (57.51%), Postives = 138/193 (71.50%), Query Frame = 1
Query:    1 GVVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
            GV+G +EKIG+AC+VHL+  +V +  Q S  + + VYAEL +D+LF EYRI S+A N I+FE NA++LL+AL S K +P CQIKL KR GQPCLSIETR  ++           + V+PA E   Y  P V  PQVQLELPR RS+RTVVDRMK+IDK+L +DA MGGQLV RVEK   +ATIKTFY+ L PR
Sbjct:   17 GVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQDMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEI----EVVHDIPVKVMPANEAEYYLPPKVHSPQVQLELPRQRSLRTVVDRMKAIDKFLFVDADMGGQLVFRVEK--ADATIKTFYSNLTPR 203          
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A7S3YAY1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAY1_HETAK)

HSP 1 Score: 155 bits (393), Expect = 2.050e-44
Identity = 83/193 (43.01%), Postives = 123/193 (63.73%), Query Frame = 1
Query:    1 GVVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
            G++  +EK+   C+++L+   + +  + S QDD+ V++E+ ++ LF +YRI S ++NCI+ E+    L RAL S + AP CQ+KL KR G+PCL++ETR  ++          V  + P        AP VP PQVQLELPRGRS RTV+DR+K I+++++IDA M G +  RV+  T  A IKTFY+ L PR
Sbjct:   18 GLISILEKVSQVCVIYLTESSMRISIKES-QDDIQVFSEISQERLFTDYRIESLSNNCILLEVGTANLGRALASGRRAPACQLKLAKRGGRPCLAVETRALEVDI---AHDLPVKLLRPGDVRFHL-APEVPRPQVQLELPRGRSFRTVIDRVKGINQHVYIDADMSGTITFRVQ--TDNAVIKTFYSNLTPR 203          
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A7S2SUZ2_9STRA (Checkpoint protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUZ2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 7.000e-39
Identity = 80/195 (41.03%), Postives = 119/195 (61.03%), Query Frame = 1
Query:    1 GVVGTMEKIGSACIVHLSPEKVWMCAQ--ASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
            GV  T+EKIG   +VHLS   + +C +  +   DD+  ++ L++  LF ++RI SQ+ NCI+ ++    LL AL S +NAP CQ+KLTKR GQ  L +ETR  ++           + V+ A E+  Y  P VP PQVQLELP  R+++TV+DR+K+I +Y+++   M G L LR E  T    I+T+++ L PR
Sbjct:   60 GVAATLEKIGPLGVVHLSDTSIQLCIRNDSGQGDDVLAFSALEQKELFHDWRIESQSGNCILLQLTLQNLLDALHSARNAPQCQLKLTKRNGQAALCLETRALEVDVIHD----IPVTVMRASEYQYYCPPDVPQPQVQLELPMSRNLKTVIDRLKNISRYIYLHGEMTGALTLRAE--TDSLVIQTYFSNLRPR 248          
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A4D9CSQ4_9STRA (Checkpoint protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSQ4_9STRA)

HSP 1 Score: 135 bits (340), Expect = 9.770e-36
Identity = 72/193 (37.31%), Postives = 115/193 (59.59%), Query Frame = 1
Query:    1 GVVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
            GV    E+ G +C+++LS   +   +     D++  ++E++++ +F EYRIAS A+N I+FEI  + L++A +S K A   +IKL KR GQPC+ +E R  DM           + V+ A +   Y  P V  P+VQLELP  RS+RTV++R K +D++  +D  M G L LR++ +     ++TFY+ L+PR
Sbjct:   17 GVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRIKLAKRAGQPCICLEARALDMELLHE----VPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLERFKIMDRFCFVDGDMSGALRLRLQND--RCHVQTFYSNLIPR 203          
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A7R9U1B3_9STRA (Checkpoint protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1B3_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.480e-26
Identity = 59/120 (49.17%), Postives = 78/120 (65.00%), Query Frame = 1
Query:  220 SVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR 579
            S + AP+CQ+KLTKR GQPCL +ETR  ++           + VL A E   Y  P VP P VQLEL + R +RT+VDR+K  DKYL+ID++M G + LRV+  +GE T+KTF+  L PR
Sbjct:    2 SGRTAPLCQLKLTKRGGQPCLCLETRALEVDVTHD----IPVKVLKASEIEAYAPPEVPSPTVQLELMQSRQLRTIVDRLKVFDKYLYIDSSMAGNMTLRVQ--SGEVTVKTFFPNLTPR 115          
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: W7TDG5_9STRA (Checkpoint protein hus1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDG5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.040e-24
Identity = 56/151 (37.09%), Postives = 89/151 (58.94%), Query Frame = 1
Query:    1 GVVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVD 453
            GV    E+ G +C+++LS   +   +     D++  ++E++++ +F EYRIAS A+N I+FEI  + L++A +S K A   ++KL KR GQPC+ +E R  DM           + V+ A +   Y  P V  P+VQLELP  RS+RTV++
Sbjct:   17 GVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHE----VPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163          
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A1Y1X7Q4_9FUNG (Checkpoint protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X7Q4_9FUNG)

HSP 1 Score: 96.7 bits (239), Expect = 9.170e-21
Identity = 60/193 (31.09%), Postives = 102/193 (52.85%), Query Frame = 1
Query:   13 TMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLW------VLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLV 573
            ++EK+   C++  + +K+++        ++ V+ ++  DLLFEE+ I S  +N I  E+    ++R L S + A     KLTK+ G P LS    +  M+   RG    +L       VL      +Y+ P VP P V + +P   SVRT++DRMKS+  YL I A   G+ +L++E  T   +++T++  L+
Sbjct:   19 SVEKLNKTCVIKFTKDKIYLIVSKIELTELQVWGQVAVDLLFEEFIIESANNNEIWIELRTDQVIRVLKSAQAAIDVYCKLTKKTGLPSLSFN--IKSMY---RGDNPVLLVQDIPIRVLNLYHINEYKEPMVPQPHVHILMPPLVSVRTIIDRMKSMSNYLTISANFNGEFILKIE--TEAVSVETYFKDLI 204          
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A1Y3MS75_PIRSE (Uncharacterized protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MS75_PIRSE)

HSP 1 Score: 94.0 bits (232), Expect = 1.540e-20
Identity = 60/193 (31.09%), Postives = 102/193 (52.85%), Query Frame = 1
Query:   13 TMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLW------VLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLV 573
            ++EK+   C++  + +KV++        ++ V+ ++  +LLFEE+ I S  +N I  E+    ++R L S ++A     KLTK+ G P LS    +  +F   RG    +L       VL      +Y+ P VP P V + +P   SVRT++DRMKS+  YL I A   G+  L++E  T   +++T++  L+
Sbjct:    7 SVEKLNKTCVLKFTRDKVFLIVSKIELTELQVWGQVAVNLLFEEFIIESANNNEIWIEVRTDQIIRVLKSAQSAIDVYCKLTKKTGLPSLSFN--IKSIF---RGDNPVLLVQDIPIRVLNLYHINEYKEPMVPQPHVHILMPPLVSVRTIIDRMKSMSNYLTISANYNGEFTLKIE--TESVSVETYFKDLI 192          
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A1X7UEC4_AMPQE (Checkpoint protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UEC4_AMPQE)

HSP 1 Score: 93.2 bits (230), Expect = 1.320e-19
Identity = 64/190 (33.68%), Postives = 98/190 (51.58%), Query Frame = 1
Query:    4 VVGTMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQAD-NCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGL 570
            VV T+ K    C++ LS  KV  C   S +  + ++ EL +   F EYRI  + + N I  E+    L RAL     A   ++KLTKR G   L    + +    NR       + ++P +  A YQ P +P   V + LP  + V+T++DRMKS+D Y+ + A M G+L +R+E +T  AT  T++  L
Sbjct:   19 VVATLAKNVKVCVLRLSAGKV--CFVISGKGSINMWCELNQSKFFSEYRIEGRDEHNEIFLEVQMEQLARALRHTSTAVSVKMKLTKRNGAYLLIDIIQATVTGGNRNVVHEVPVNIVPQRLWADYQEPDMPDIDVSIFLPPLKQVKTIIDRMKSLDNYITLSANMSGELNIRIETSTVTAT--TYFKNL 204          
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Match: A0A1Y1VN73_9FUNG (Checkpoint protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VN73_9FUNG)

HSP 1 Score: 93.2 bits (230), Expect = 1.440e-19
Identity = 58/193 (30.05%), Postives = 103/193 (53.37%), Query Frame = 1
Query:   13 TMEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQADNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFCNRRGRRFTVLW------VLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKSIDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLV 573
            ++EK+   C++  + +K+++        ++ V+ ++  +LLFE++ I S  +N I  E+    ++R L S ++A     KLTK+ G P LS    +  +F   RG    +L       VL     ++Y+ P VP P V + +P   SVRT++DRMKS+  YL I A   G+  L++E  T   +++T++  L+
Sbjct:    4 SVEKLNKTCVLKFTRDKIFLIVSKIELTELQVWGQVAINLLFEDFIIESANNNEIWLEVRTDQIIRVLKSAQSAIDVYCKLTKKTGLPSLSFN--IKSIF---RGDNPVLLVQDIPIRVLNMYHISEYKEPMVPQPHVHILMPPLVSVRTIIDRMKSMSNYLTISANYNGEFTLKIE--TESVSVETYFKDLI 189          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig848.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRE2_ECTSI8.270e-6357.51Checkpoint protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7S3YAY1_HETAK2.050e-4443.01Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SUZ2_9STRA7.000e-3941.03Checkpoint protein n=1 Tax=Rhizochromulina marina ... [more]
A0A4D9CSQ4_9STRA9.770e-3637.31Checkpoint protein n=1 Tax=Nannochloropsis salina ... [more]
A0A7R9U1B3_9STRA1.480e-2649.17Checkpoint protein n=1 Tax=Pinguiococcus pyrenoido... [more]
W7TDG5_9STRA4.040e-2437.09Checkpoint protein hus1 n=1 Tax=Nannochloropsis ga... [more]
A0A1Y1X7Q4_9FUNG9.170e-2131.09Checkpoint protein n=1 Tax=Anaeromyces robustus Ta... [more]
A0A1Y3MS75_PIRSE1.540e-2031.09Uncharacterized protein (Fragment) n=1 Tax=Piromyc... [more]
A0A1X7UEC4_AMPQE1.320e-1933.68Checkpoint protein n=1 Tax=Amphimedon queenslandic... [more]
A0A1Y1VN73_9FUNG1.440e-1930.05Checkpoint protein n=1 Tax=Piromyces finnis TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig848contigP-wetherbeei_contig848:7207..8286 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FRE2
Preferred nameHUS1
PFAMsHus1
Model size579
Max annot lvl2759|Eukaryota
KEGG koko:K02870,ko:K10903,ko:K10996
KEGG Pathwayko03010,ko04218,map03010,map04218
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000076,GO:0000077,GO:0000228,GO:0000278,GO:0000723,GO:0000724,GO:0000725,GO:0000785,GO:0000792,GO:0000793,GO:0000794,GO:0001932,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006275,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0006997,GO:0007049,GO:0007093,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007338,GO:0007346,GO:0008150,GO:0008152,GO:0008156,GO:0009314,GO:0009411,GO:0009416,GO:0009566,GO:0009628,GO:0009653,GO:0009790,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010212,GO:0010389,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010639,GO:0010948,GO:0010972,GO:0016043,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019953,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030717,GO:0030720,GO:0030896,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031570,GO:0031573,GO:0031974,GO:0031981,GO:0032200,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033313,GO:0033314,GO:0033554,GO:0034641,GO:0035038,GO:0035861,GO:0036211,GO:0040020,GO:0042325,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044778,GO:0044818,GO:0045786,GO:0045835,GO:0045930,GO:0045934,GO:0046483,GO:0048468,GO:0048477,GO:0048519,GO:0048523,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051246,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051598,GO:0051674,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0060249,GO:0060255,GO:0061982,GO:0061988,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070193,GO:0070194,GO:0070925,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090734,GO:0104004,GO:1901360,GO:1901564,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903046,GO:1903047,GO:1990421,GO:2000112,GO:2000113,GO:2000241,GO:2000242
Exons3
Evalue8.35e-61
EggNOG OGsKOG3999@1|root,KOG3999@2759|Eukaryota
Descriptionmeiotic DNA integrity checkpoint
Cds size564
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187042.73449-UTR-P-wetherbeei_contig848:7206..72211683187042.73449-UTR-P-wetherbeei_contig848:7206..7221Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig848 7207..7221 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187042.7526958-CDS-P-wetherbeei_contig848:7221..73321683187042.7526958-CDS-P-wetherbeei_contig848:7221..7332Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig848 7222..7332 +
1683187042.7636478-CDS-P-wetherbeei_contig848:7441..76631683187042.7636478-CDS-P-wetherbeei_contig848:7441..7663Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig848 7442..7663 +
1683187042.772301-CDS-P-wetherbeei_contig848:8055..82861683187042.772301-CDS-P-wetherbeei_contig848:8055..8286Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig848 8056..8286 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig848.6.2prot_P-wetherbeei_contig848.6.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig848 7222..8286 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig848.6.2

>prot_P-wetherbeei_contig848.6.2 ID=prot_P-wetherbeei_contig848.6.2|Name=mRNA_P-wetherbeei_contig848.6.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp
MEKIGSACIVHLSPEKVWMCAQASYQDDMAVYAELKKDLLFEEYRIASQA
DNCIMFEINATILLRALTSVKNAPMCQIKLTKRQGQPCLSIETRVSDMFC
NRRGRRFTVLWVLPAQEHAQYQAPAVPPPQVQLELPRGRSVRTVVDRMKS
IDKYLHIDATMGGQLVLRVEKNTGEATIKTFYNGLVPR
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mRNA from alignment at P-wetherbeei_contig848:7207..8286+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig848.6.2 ID=mRNA_P-wetherbeei_contig848.6.2|Name=mRNA_P-wetherbeei_contig848.6.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1080bp|location=Sequence derived from alignment at P-wetherbeei_contig848:7207..8286+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGTTGTGGGCACGATGGAGAAAATCGGCTCGGCGTGCATCGTGCACTT GAGCCCGGAAAAGGTCTGGATGTGCGCCCAGGCTTCGTACCAGGACGACA TGGCCGTCTATGCGGAGCTCAAGAAGGTCAGTGTGCAAGTCACAACTTTT CTGCACAAAAAGAGCTGCACATTAATCTCTCATTTCTACTCTGCCTTTCT CTCACGTAATTTTGACCTCCTCACTTTTGTCGCAGGATCTGTTGTTCGAG GAGTACCGGATCGCCAGCCAGGCGGACAACTGTATCATGTTCGAGATCAA CGCCACCATCCTGCTGCGCGCCCTCACGAGCGTCAAGAATGCCCCCATGT GTCAAATCAAGCTCACGAAGCGCCAAGGTCAGCCCTGCCTCTCAATAGAG ACCAGGGTGAGCGATATGTTTTGTAACAGACGGGGACGGCGCTTTACGGT GTTGTGGGTGAAGAAGTCGCAACGTGGATGCCGCGCATGCAGCCACTCGG AAGCCACGCGTATCCGATAGGGCTTGACCTGCTCATGCGCAGAGATTCCG CGAGGGTTGATGCATCTCAGGTTGCCCGGCAGTTTTACCTAGTTCAATTC GTCCTTCCTTCTTCGCTGGCCGCAGGCCTTGGAGATCGACGTGGTGCACG ACGCTCCCATCAAGGTGACTGCAACATTGTTAATCTCGTGTACTGTGAAG AGATCTTTGGCGACCCTTGCAATTCCGACCATTTGGCTATAAATCCGTCT GTTGCTGCGTTAGCACTTACTCAAACGTGCGAGTCCAGCTACTGCCGGCT TTGCTCGCGTCCTTTTCCTTCGGACGGCGGCCGGAAACACCGGCGGCAGG TCCTCCCGGCGCAGGAGCACGCGCAGTACCAGGCACCGGCAGTGCCGCCG CCGCAGGTGCAGCTGGAGCTGCCGCGTGGCCGCAGCGTACGGACAGTGGT GGACCGCATGAAGTCGATCGACAAGTACCTTCACATCGACGCCACCATGG GTGGCCAGCTCGTGCTGCGTGTTGAGAAGAACACCGGAGAGGCTACCATA AAGACCTTTTACAATGGCCTCGTCCCCAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig848:7207..8286+

>mRNA_P-wetherbeei_contig848.6.2 ID=mRNA_P-wetherbeei_contig848.6.2|Name=mRNA_P-wetherbeei_contig848.6.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig848:7207..8286+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGAAAATCGGCTCGGCGTGCATCGTGCACTTGAGCCCGGAAAAGGT
CTGGATGTGCGCCCAGGCTTCGTACCAGGACGACATGGCCGTCTATGCGG
AGCTCAAGAAGGATCTGTTGTTCGAGGAGTACCGGATCGCCAGCCAGGCG
GACAACTGTATCATGTTCGAGATCAACGCCACCATCCTGCTGCGCGCCCT
CACGAGCGTCAAGAATGCCCCCATGTGTCAAATCAAGCTCACGAAGCGCC
AAGGTCAGCCCTGCCTCTCAATAGAGACCAGGGTGAGCGATATGTTTTGT
AACAGACGGGGACGGCGCTTTACGGTGTTGTGGGTCCTCCCGGCGCAGGA
GCACGCGCAGTACCAGGCACCGGCAGTGCCGCCGCCGCAGGTGCAGCTGG
AGCTGCCGCGTGGCCGCAGCGTACGGACAGTGGTGGACCGCATGAAGTCG
ATCGACAAGTACCTTCACATCGACGCCACCATGGGTGGCCAGCTCGTGCT
GCGTGTTGAGAAGAACACCGGAGAGGCTACCATAAAGACCTTTTACAATG
GCCTCGTCCCCAGG
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