prot_P-wetherbeei_contig840.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig840.3.1
Unique Nameprot_P-wetherbeei_contig840.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length65
Homology
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: A0A392QU65_9FABA (Retinoblastoma-binding protein 5-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392QU65_9FABA)

HSP 1 Score: 86.3 bits (212), Expect = 5.700e-20
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    1 QEGLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTV 62
            +E L+ LAWHPVRP + + ++ G V +W  D+  NW+AFAP F+ELEEN EYVEREDEFD V
Sbjct:   17 KEALIDLAWHPVRPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLV 78          
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: A0A6H5KX51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX51_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.060e-19
Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    3 GLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTVV 63
            GLL+L  HPVRPF+AAA   G+VQ+WGT   ANWTAFA  F+ELEEN EYVE+EDEFD VV
Sbjct:  199 GLLSLTRHPVRPFLAAALTSGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVV 259          
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: D7G0T3_ECTSI (Retinoblastoma binding protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T3_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.060e-19
Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    3 GLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTVV 63
            GLL+L  HPVRPF+AAA   G+VQ+WGT   ANWTAFA  F+ELEEN EYVE+EDEFD VV
Sbjct:  327 GLLSLTRHPVRPFLAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVV 387          
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: A0A392PNV0_9FABA (Retinoblastoma-binding protein 5-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PNV0_9FABA)

HSP 1 Score: 86.3 bits (212), Expect = 2.600e-19
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    4 LLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTVVTT 65
            L+ LAWHPVRP + +A++ G V +W  D+  NW+AFAP F+ELEEN EYVEREDEFD +  T
Sbjct:  112 LIDLAWHPVRPIVVSASLNGVVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPQT 173          
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: U5FF12_POPTR (Uncharacterized protein n=7 Tax=Saliceae TaxID=238069 RepID=U5FF12_POPTR)

HSP 1 Score: 88.6 bits (218), Expect = 5.150e-19
Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    1 QEGLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTVVTT 65
            +E L+ LAWHPV P I + ++ G V VW  DH  NW+AFAP F+ELEEN EYVEREDEFD +  T
Sbjct:  335 KEALIDLAWHPVHPIIVSVSLTGMVYVWAKDHTENWSAFAPDFKELEENEEYVEREDEFDLIPET 399          
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: UPI00057AC816 (retinoblastoma-binding protein 5 homolog isoform X1 n=1 Tax=Populus euphratica TaxID=75702 RepID=UPI00057AC816)

HSP 1 Score: 88.6 bits (218), Expect = 5.200e-19
Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    1 QEGLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTVVTT 65
            +E L+ LAWHPV P I + ++ G V VW  DH  NW+AFAP F+ELEEN EYVEREDEFD +  T
Sbjct:  335 KEALIDLAWHPVHPIIVSVSLTGMVYVWAKDHTENWSAFAPDFKELEENEEYVEREDEFDLIPET 399          
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: A0A5K1GPX1_9MAGN (Uncharacterized protein (Fragment) n=4 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1GPX1_9MAGN)

HSP 1 Score: 87.4 bits (215), Expect = 6.840e-19
Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    1 QEGLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTVVTT 65
            +E L  LAWHP++P +A+ +M G V +W  DH  NW+AFAP F+ELEEN EYVEREDEFD +  T
Sbjct:  296 KEALTDLAWHPLQPLVASVSMSGLVYIWAKDHTENWSAFAPDFKELEENEEYVEREDEFDLMPET 360          
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: A0A176W7F5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W7F5_MARPO)

HSP 1 Score: 87.8 bits (216), Expect = 9.890e-19
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    1 QEGLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTV 62
            +EGL  LAWHP RP +A+ +M G V +W  D+  NW+AFAP F+ELEEN EYVEREDEFD +
Sbjct:  323 KEGLCDLAWHPTRPVVASVSMSGAVYLWAKDYTENWSAFAPDFKELEENEEYVEREDEFDII 384          
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: A0A835MEU6_9ROSI (Terpene_synth_C domain-containing protein n=3 Tax=Salix TaxID=40685 RepID=A0A835MEU6_9ROSI)

HSP 1 Score: 87.8 bits (216), Expect = 9.900e-19
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 QEGLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTV 62
            +E L+ LAWHPV P I + ++ G V VW  DH  NW+AFAP F+ELEEN EYVEREDEFD +
Sbjct:  480 KEALIDLAWHPVHPIIVSVSLTGMVYVWAKDHTENWSAFAPDFKELEENEEYVEREDEFDLI 541          
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Match: A0A6N2LHP2_SALVM (Uncharacterized protein n=2 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2LHP2_SALVM)

HSP 1 Score: 87.8 bits (216), Expect = 9.970e-19
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 QEGLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENAEYVEREDEFDTV 62
            +E L+ LAWHPV P I + ++ G V VW  DH  NW+AFAP F+ELEEN EYVEREDEFD +
Sbjct:  873 KEALIDLAWHPVHPIIVSVSLTGMVYVWAKDHTENWSAFAPDFKELEENEEYVEREDEFDLI 934          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig840.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A392QU65_9FABA5.700e-2059.68Retinoblastoma-binding protein 5-like (Fragment) n... [more]
A0A6H5KX51_9PHAE2.060e-1970.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0T3_ECTSI2.060e-1970.49Retinoblastoma binding protein 5 n=1 Tax=Ectocarpu... [more]
A0A392PNV0_9FABA2.600e-1959.68Retinoblastoma-binding protein 5-like (Fragment) n... [more]
U5FF12_POPTR5.150e-1960.00Uncharacterized protein n=7 Tax=Saliceae TaxID=238... [more]
UPI00057AC8165.200e-1960.00retinoblastoma-binding protein 5 homolog isoform X... [more]
A0A5K1GPX1_9MAGN6.840e-1958.46Uncharacterized protein (Fragment) n=4 Tax=Nymphae... [more]
A0A176W7F5_MARPO9.890e-1961.29Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A835MEU6_9ROSI9.900e-1961.29Terpene_synth_C domain-containing protein n=3 Tax=... [more]
A0A6N2LHP2_SALVM9.970e-1961.29Uncharacterized protein n=2 Tax=Salix viminalis Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037850Retinoblastoma-binding protein 5/Swd1PANTHERPTHR44040RETINOBLASTOMA-BINDING PROTEIN 5coord: 2..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig840contigP-wetherbeei_contig840:8010..8518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig840.3.1mRNA_P-wetherbeei_contig840.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig840 8010..8518 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig840.3.1 ID=prot_P-wetherbeei_contig840.3.1|Name=mRNA_P-wetherbeei_contig840.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=65bp
QEGLLALAWHPVRPFIAAATMEGQVQVWGTDHNANWTAFAPGFQELEENA
EYVEREDEFDTVVTT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037850RBBP5/Swd1