mRNA_P-wetherbeei_contig8353.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: Q8QNB2_ESV1K (EsV-1-175 n=2 Tax=root TaxID=1 RepID=Q8QNB2_ESV1K) HSP 1 Score: 201 bits (511), Expect = 2.290e-58 Identity = 115/345 (33.33%), Postives = 197/345 (57.10%), Query Frame = 1
Query: 4 SKFIREHLQMLLDTEDPEAVVNSMRGRCTATSLAGQIARVKRLYFDLNIRNESFEENVLGIYEFIRCRPGEFEQEAVEKFKVFCTDSVAFQWRKQRDAIYRS-FTGNERLDAAIGVLKIVPPYFEEFKLTEDDQAKLKAVSAANLEKSSSECVVVKDCIALLKRC-KRWARDPPDPYVLAASLAVLCGRRSVEILSCGRFRRCPDHE--YACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLRKEIPTEGMDNARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYKAFTHSMSINLWLKKVLIHEDLSTSVNYTRCRVDGKPKKLGTWVW 1026
SKFI E ++L T+D + V++++R + +S Q++RVK + R+E F + Y + + AV++ + + D + Q +K R A + TG+E+LD + ++++P Y +E++LTE D+ +S +LE S +CV + D L++RC ++ + P+VLAA ++++CGRRS+EIL G F D Y+C F+GAAK+++ ++ + IPLLIK+ +LK++R+ IP E + N +++ + +L D AK L + FHD R +YG I+++ F ++ SIN+WL K L+HE L TS+ Y+R R+D G W +
Sbjct: 11 SKFILEQAELLHRTKDAKPVLDNLRNKYALSSFPSQMSRVKVEWCKFGERHEQFYTIMEQAYRTACSADNTYPRRAVKELRQYMKDDMIMQMKKWRAAKSPAGLTGDEKLDDLVCKVQLLPDYMKEYRLTETDRTSSSELSKKSLETRSMDCVEIPDADELVERCIEKIKANTECPFVLAACISLVCGRRSIEILKTGEFSEGTDARGHYSCFFTGAAKKKVVCKD-----KCEIPLLIKYKYLKHSLKRVRENIPCENLTNQAINSKYSHKLGDAAKILTGNMRVRFHDLRGLYGMISHRTFKNNCSINIWLTKTLLHEALDTSIFYSRFRIDKCSTNRGEWAF 350
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: B5LWE9_9PHYC (Putative protelomerase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE9_9PHYC) HSP 1 Score: 198 bits (503), Expect = 3.110e-57 Identity = 124/342 (36.26%), Postives = 192/342 (56.14%), Query Frame = 1
Query: 4 SKFIREHLQMLLDTEDPEAVVNSMRGRCTATSLAGQIARVKRLYFDLNIRNESFEENVLGIYEFIRCRPGEFEQEAVEKFKVFCTDSVAFQWRKQRDAIYRSFTGNERLDAAIGVLKIVPPYFEEFKLTEDDQAKLKAVSAANLEKSSSECVVVKDCIALLKRC-KRWARDPPDPYVLAASLAVLCGRRSVEILSCGRFRRCPDH-EYACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLRKEIPTEGMD-NARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYKAFTHSMSINLWLKKVLIHEDLSTSVNYTRCRVDGKPKKLGTW 1020
S FIR+ ++L DP V+ ++R + +S Q+ RVK +F R++ F Y ++ + + +++++ F D + Q K ++A TG++R DAAI +KI+P Y ++LT+ D AK K++S LEK + +CV V D AL+ +C K D +V+ A+LAV+ GRR++EIL G FR+ YA +F+GAAK+R E+ + +PLL+KF RAL +R IP D NA ++A +L D AK + S FHD R +YG +T+ AF + SIN+WLK+VL+H+ + TSV Y+RC+V +LG W
Sbjct: 3 SAFIRKQAELLHTLRDPLTVLQNIRDKYAVSSFPSQMTRVKDEWFKYGDRHKDFGTQWKKGYASLKSQ--NVSGKYLDQYREFQEDKMKEQLLKVKEAAANRLTGSKRTDAAIASIKIMPDYMAGYRLTKADIAKNKSLSTDGLEKRAMQCVDVDDADALVSQCTKILVSLEDDIHVVVAALAVVTGRRAIEILKVGEFRKSVGKGPYAMSFNGAAKRR---EKNSESTSQDVPLLVKFKYVKRALDLIRSRIPIGPDDSNAVINARFSHKLGDAAKIITNSVSTRFHDLRAIYGCVTHVAFENKCSINIWLKRVLLHDSIDTSVFYSRCKVSKCLLRLGDW 339
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: Q6XLY5_9PHYC (FirrV-1-B51 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLY5_9PHYC) HSP 1 Score: 181 bits (458), Expect = 4.050e-50 Identity = 110/343 (32.07%), Postives = 180/343 (52.48%), Query Frame = 1
Query: 4 SKFIREHLQMLLDTEDPEAVVNSMRGRCTATSLAGQIARVKRLYFDLNIRNESFEENVLGIYEFIRCRPGEFEQEAVEKFKVFCTDSVAFQWRKQRDAIYRSFTGNERLDAAIGVLKIVPPYFEEFKLTEDDQAKLKAVSAANLEKSSSECVVVKDCIALLKRCKRWARD-PPDPYVLAASLAVLCGRRSVEILSCGRFRRCPDHE---YACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLRKEIPTEGMDNARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYKAFTHSMSINLWLKKVLIHEDLSTSVNYTRCRVDGKPKKLGTW 1020
S FIR+ ++L + DP V+ ++R +S Q+ RVK+ ++ R+ +E+ + Y ++ + + +F F D++ Q K + A TG+ R DA I +KI+P Y +++LT++D + K S+A LE + C+ V D L+ C +D D +++ A+LAV+ GRR +EI G F P + YA F G AK+R T + D +PLL K+ RA+ +R +I + N ++A R+ D AK L FHD R +YG +T+ F ++ SIN+WLK VL+H+++ TSV Y+RC++ K+G W
Sbjct: 38 SAFIRKQAKLLYSSRDPLTVLQNIRDEYAVSSFPSQMTRVKQEWYHYKDRHSEYEDMIKKGYSTLKSQ--NISSRYISQFTKFHNDTMKEQLHKIQQASAGKLTGSRRTDAIIAGIKIMPEYMRDYRLTKEDLNRNKESSSAFLELRAMNCIEVDDADQLVSACIPILKDLEEDVHMIMAALAVVTGRRCIEIAKTGHFMPTPSNARWPYAMRFDGVAKKRGTDFQPRD-----VPLLAKYKYVRRAVDHVRAKICVSNLPNNIINAKLSHRVGDAAKILTGRLSTRFHDLRAIYGCVTHMVFENTCSINIWLKHVLLHDNIDTSVYYSRCKIAKCTLKMGRW 373
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: A0A835Z4K7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K7_9STRA) HSP 1 Score: 122 bits (305), Expect = 4.970e-28 Identity = 106/338 (31.36%), Postives = 164/338 (48.52%), Query Frame = 1
Query: 40 DTEDPEAVVNSMRGRCTATSLAGQIARVKRLYFDLNIRNESF----EENVLGIYEFIRCRPGEFEQ---EAVEKFKVFCTDSVAFQWRKQRDAIYRSFTGNERLDAAIGVLKIVPPYFEEFKLTEDDQAKLKAVSAANLEKSSSECVVVKDCIALLKRCKRWARDPPD-PYVLAASLAVLCGRRSVEILSCGRFRRCPDHEYACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLRKEIPTEGMDNARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYK-AFTHSMSINLWLKKVLIHEDLSTSVNYTRCRVDGKPKKLGTWVW 1026
D+ D VV +R + SLA ++ VK+ + L ++++ E +++ E +R P + +AV K + F +A + + QR A +FTG R+DA I +++ P Y +E +LT+ ++ LK L+K SS + D L+ + + D P+ +A +LA+L GRR +E+ G F D A FSG AK ED P YRIPLL F AL +LR+ P M NA V++ + R A+ L FHD R YG + Y H S+NL++ +VL H L S++YT V+G ++ VW
Sbjct: 15 DSGDAAGVVGYIRDKWPK-SLATYLSGVKKAWMTLEHHHDAYPADSEASIIKADELLRTEPRVTKPALAKAVTKLREFHDLPLADKHKAQRAARRIAFTGEARIDAIICDIRLFPDYMKELRLTDGERIALKKRGEDALDKKSSSAWEL-DAGVLVDKARGVIEDDISAPFDIACALALLTGRRMIELFKTGSFSAGADATSA-VFSGQAKTGSA----EDHP-YRIPLLCPFRSVEVALSRLRRMKPCGDMSNAAVNSKYSGRCNVAARQWL-GPGRKFHDFREGYGVVCYNLCLPHKWSLNLFVSRVLGHSGLENSLHYTAIHVNGI-READRMVW 342
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: A0A835YYB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB8_9STRA) HSP 1 Score: 119 bits (298), Expect = 6.040e-27 Identity = 106/332 (31.93%), Postives = 153/332 (46.08%), Query Frame = 1
Query: 34 LLDTEDPEAVVNSMRGRCTATSLAGQIARVKRLYFDLNIRNESFEENVLGIYE----FIRCRPGEFEQE---AVEKFKVFCTDSVAFQWRKQRDAIYRSFTGNERLDAAIGVLKIVPPYFEEFKLTEDDQAKLKAVSAANLEKSSSECVVVKDCIALLKRCKRW-ARDPPDPYVLAASLAVLCGRRSVEILSCGRFRRCPDH--EYACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLRKEIPTEGMDNARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYK-AFTHSMSINLWLKKVLIHEDLSTSVNYTRCRVDG 996
L DTED VV +R SLA ++ VKR + L + + E+ +R P AV + F + Q + Q+ A F+G+ R+DA I ++I P + E +++ +++A +K + LEK S V + LL +R A D P+ LAA+LA+L GRR VEI G F P +YAC F G AK E E P Y +PLL + L +LR+ P + V++ AK +L D FHD R Y ITY A H+ S+N W+ KVL H+ + S++YT V G
Sbjct: 12 LQDTEDARGVVAYIRSTWPR-SLATYLSGVKREWMTLENHHPEYPEDSESASAKTSALLREEPKATRAALTAAVGRMTDFFDMPLGKQNKAQKLARGLRFSGDPRIDALIAGVRIFPDFMRELRVSNEERADMKDRARLALEKKSCTTWDV-NAGELLDWARRVVADDISPPFELAAALALLTGRRMVEIFKLGSFDAAPAGYGDYACAFMGQAKTN----ELEAPQHYLLPLLAPLSDVQTGLSRLRRMKPAAELSRKEVNSKWDGCCCTAAKKVLGEDHK-FHDMREAYAIITYNLALPHTWSLNYWVSKVLGHKGMENSLHYTCIHVKG 336
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: UPI0018A3B06E (telomere resolvase n=3 Tax=Pseudomonas TaxID=286 RepID=UPI0018A3B06E) HSP 1 Score: 70.9 bits (172), Expect = 8.230e-10 Identity = 68/235 (28.94%), Postives = 112/235 (47.66%), Query Frame = 1
Query: 337 AIGVLKIVPPYFEEFKLTEDDQAKLKAVSAANLEKSSSECVVVK------DCIALLKRCKRWARDPPDPYV--LAASLAVLCGRRSVEILSCGRFRRCPDHEYACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLR---KEIPTEGMDNARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYKA-FTH-----SMSINLWLKKVLIHEDLSTSVNYTRCRV 990
AI +K+ L +A+L ++ A LE+ ++ V V LL + A P LA LA++ GRR +E+L GRF + EY FSG AK+R ++ YRI L+K D AL++LR + + + +DN V+ K L AK +L S + VF D+R ++ I ++ FT S++ ++ +++L HED+ T +Y ++
Sbjct: 164 AIQAMKLDHEIMRHLVLPAVTKAELATMATATLEERATNTVEVNYYQYVDTAQRLLTDAEIGANGEPVQRFSSLALGLAMVTGRREIEVLKLGRFEKAG--EYELEFSGQAKRRNGVDY---GSSYRIYTLLKADLVLEALERLRVLPEVLELQHLDNIEVNRRVAKTLNTVAKRVLGSPDRVFKDSRAMWARIVFETHFTRDARWKSVNETVFWREMLGHEDMDTQESYKAFKI 393
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: UPI001746D353 (hypothetical protein n=1 Tax=Pseudomonas kunmingensis TaxID=1211807 RepID=UPI001746D353) HSP 1 Score: 67.8 bits (164), Expect = 8.130e-9 Identity = 52/182 (28.57%), Postives = 93/182 (51.10%), Query Frame = 1
Query: 481 LLKRCKRWARDPPDPYV--LAASLAVLCGRRSVEILSCGRFRRCPDHEYACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLR---KEIPTEGMDNARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYKAFT------HSMSINLWLKKVLIHEDLSTSVNYTRCRVD 993
LL + + A PY LA LA+ GRR +E+L GRF++ E+ FSG AK+R ++ E +RI L++ DE A KLR + + + + N V+ K L AK + S+E VF D+R ++ I ++ + ++ +++ +++L HE + + ++Y ++D
Sbjct: 195 LLSQQQLRADGSAAPYFSHLALGLALATGRREIEVLKLGRFKKVG--EFELEFSGQAKRREGVDYSET---FRIYSLVRADEVLEAFAKLRALPEVLELQHLSNVEVNRRVAKTLNTLAKRVFGSEERVFKDSRSIWARIVFERYFGQDARWKKVNEDVFWQEMLGHEGMKSQIHYKAFKID 371
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: A0A7Y1BDT0_9PSED (Uncharacterized protein n=2 Tax=Pseudomonas TaxID=286 RepID=A0A7Y1BDT0_9PSED) HSP 1 Score: 65.5 bits (158), Expect = 4.630e-8 Identity = 48/163 (29.45%), Postives = 83/163 (50.92%), Query Frame = 1
Query: 532 LAASLAVLCGRRSVEILSCGRFRRCPDHEYACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLR---KEIPTEGMDNARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYK------AFTHSMSINLWLKKVLIHEDLSTSVNYTRCRVD 993
LA LA GRR VE+L+ GRF++ D E FSG AK+R ++ + Y I L+ D A+ KLR + + +GM N +++ K L AK + + VF D+R ++ + ++ A ++ +++ + +L HED+ T Y + ++D
Sbjct: 220 LALGLAFATGRREVEVLALGRFKKVGDFEVE--FSGQAKRREGVDYSDS---YTIYTLVPADAVIDAMDKLRALPEVLELQGMSNVQINQRVAKTLNTLAKRVFQDEARVFRDSRAIWARLVFELHFNRDARWKKVNESIFWRSMLGHEDVDTQEAYKQFKID 377
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: UPI001F20133C (telomere resolvase n=4 Tax=Pseudomonas gessardii TaxID=78544 RepID=UPI001F20133C) HSP 1 Score: 65.1 bits (157), Expect = 6.180e-8 Identity = 50/169 (29.59%), Postives = 86/169 (50.89%), Query Frame = 1
Query: 532 LAASLAVLCGRRSVEILSCGRFRRCPDHEYACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLR---KEIPTEGMDNARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYKAFTH------SMSINLWLKKVLIHEDLSTSVNYTRCRVD-GKPKK 1008
LA LA GRR VE+L+ GRF++ D E FSG AK+R ++ + YRI LI D A+ KLR + + + M N +++ K L AK + VF D+R ++ + ++ + ++ +++ + +L HED+ T Y + ++D KP++
Sbjct: 220 LALGLAFATGRREVEVLALGRFKKVGDFEVE--FSGQAKRREGIDHTDS---YRIYTLIPADAVIEAMNKLRALPEVLELQDMTNVQINQRVAKTLNTLAKRIFDDPARVFRDSRSIWARLVFELHFNRDDRWKKVNESVFWRSMLGHEDVDTQEAYKQFKIDYTKPER 383
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Match: A0A423HS72_9PSED (Uncharacterized protein n=2 Tax=Pseudomonas frederiksbergensis TaxID=104087 RepID=A0A423HS72_9PSED) HSP 1 Score: 63.9 bits (154), Expect = 1.480e-7 Identity = 48/162 (29.63%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 532 LAASLAVLCGRRSVEILSCGRFRRCPDHEYACTFSGAAKQRLTLEEEEDPPEYRIPLLIKFDEFYRALKKLR---KEIPTEGMDNARVHAIHGKRLVDGAKHLLLSDEAVFHDTRRVYGAITYKA-FTH-----SMSINLWLKKVLIHEDLSTSVNYTRCRV 990
LA LA++ GRR VE+L+ GRF++ E+ FSG AK+R ++ YRI LI D+ A+++LR + + + +DN ++ K L AK + + VF D+R ++ I ++ FT +++ ++ +++L HED+ T +Y ++
Sbjct: 226 LALGLAMVTGRREVEVLALGRFKKVG--EFELEFSGQAKRRGGVDYSSS---YRIYSLIPADQVLAAVERLRALPEVLELQHLDNTEINRRVAKTLNTTAKRVFGGEGWVFKDSRAIWARIVFETHFTRDARWKTVNETVFWREMLGHEDMDTQESYKAFKI 382 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8353.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8353.1.1 >prot_P-wetherbeei_contig8353.1.1 ID=prot_P-wetherbeei_contig8353.1.1|Name=mRNA_P-wetherbeei_contig8353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=343bp MSKFIREHLQMLLDTEDPEAVVNSMRGRCTATSLAGQIARVKRLYFDLNIback to top mRNA from alignment at P-wetherbeei_contig8353:510..1538+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8353.1.1 ID=mRNA_P-wetherbeei_contig8353.1.1|Name=mRNA_P-wetherbeei_contig8353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1029bp|location=Sequence derived from alignment at P-wetherbeei_contig8353:510..1538+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8353:510..1538+ >mRNA_P-wetherbeei_contig8353.1.1 ID=mRNA_P-wetherbeei_contig8353.1.1|Name=mRNA_P-wetherbeei_contig8353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1029bp|location=Sequence derived from alignment at P-wetherbeei_contig8353:510..1538+ (Phaeothamnion wetherbeei SAG_119_79)back to top |