mRNA_P-wetherbeei_contig8222.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: D7FSP6_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP6_ECTSI) HSP 1 Score: 288 bits (736), Expect = 8.320e-91 Identity = 139/223 (62.33%), Postives = 172/223 (77.13%), Query Frame = 2
Query: 128 RVVLRPFNADYVAKSRHKHGQLDLT-QGFTEAHMYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREETGIGSFEDVDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPVFTGGPFLIWGLTGYLLHRFVMDVVKQHYVVS 793
R VL PF A VA+SR G+LDL +GFT+ HMY+++K L R+PRH+T LTE RASVM+PLCNVDGVAS+LFTKR+ MR ++N+VCFPGGKVD G DQHI+ TA+REM EE GI VDV+GVLRCDW EVAS GVAVTPVVGFLG++++ Q+ PN EVSHCF++P+ LLE + W ++ AAP F GGP+ IWGLTGY+LHR V DV++QH V
Sbjct: 331 RRVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIETAVREMGEEIGILE-SSVDVLGVLRCDWSEVASLI-GVAVTPVVGFLGNLSQEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILHRLVNDVLRQHLAVK 551
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: A0A6H5JIG8_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG8_9PHAE) HSP 1 Score: 280 bits (717), Expect = 4.480e-88 Identity = 136/222 (61.26%), Postives = 169/222 (76.13%), Query Frame = 2
Query: 128 RVVLRPFNADYVAKSRHKHGQLDLT-QGFTEAHMYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREETGIGSFEDVDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPVFTGGPFLIWGLTGYLLHRFVMDVVKQHYVV 790
R VL PF A VA+SR G+LDL +GFT+ HMY+++K L R+PRH+T LTE RASVM+PLCNVDGVAS+LFTKR+ +R ++N+VCFPGGKVD G DQHI+ TA+REM EE GI VDV+GVLRCDW EVAS GVAVTPVVGFLG+++ Q+ PN EVSHCF++P+ LL+ + W + AAP F GGP+ IWGLTGY+L R V DV++QH V
Sbjct: 321 RKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNLRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILE-SSVDVLGVLRCDWSEVASLI-GVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLQEDRWQVNKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQHLAV 540
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: A0A7S3MB31_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB31_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.140e-71 Identity = 109/215 (50.70%), Postives = 152/215 (70.70%), Query Frame = 2
Query: 134 VLRPFNADYVAKSRHKHGQLDLTQGFTEAHMYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREETGIGSFEDVDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPVFTGGPFLIWGLTGYLLHRFVMDVVKQ 778
+L PF + V + R +H LDL++GFT + +++YL RMPRH+ E RASV+IPLCNV+GVAS+LF +R+ +R H+ +VCFPGG +D GVD I+ T++REM EE GI E ++V+G+LRC+W EVAS T G+AVTPV+GF+G++ L PNS EV F++P+ LL+ + WL + PVFTGGP IWGLT YLL +F+ +VV +
Sbjct: 47 LLVPFLDESVERRRLRHHHLDLSKGFTRKEIVILQRYLHRMPRHVFHNAERRASVIIPLCNVNGVASVLFERRSMKVRTHKQQVCFPGGMLDEGVDSTIIQTSLREMEEELGIPR-EKIEVLGILRCNWNEVASMT-GIAVTPVIGFIGELNDLVLTPNSDEVEQYFTIPLDDLLDEQKWLTRNFSTPVFTGGPHTIWGLTAYLLEKFLKEVVMK 259
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: A0A4D9DAL0_9STRA (Nudix hydrolase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAL0_9STRA) HSP 1 Score: 225 bits (573), Expect = 4.220e-69 Identity = 107/219 (48.86%), Postives = 151/219 (68.95%), Query Frame = 2
Query: 134 VLRPFNADYVAKSRHKHGQLDLTQGFTEAHMYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREETGIGSFEDVDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPV-FTGGPFLIWGLTGYLLHRFVMDVVKQHYV 787
VL P+ A+ + + R K LDL G T H+ ++KYL R PR +T+ RASV+IPLCNV+GVAS+LF +R+ +R +N+VCFPGG V+ +D +I+ T++REM EE G + VDV+GVLRCDW EV T G+ VTPVVGFLGD+ + +L PN +EV+ CF++P+ LL+ EHW +E + V F GGP +IWGLT +LL F+ D++ ++ V
Sbjct: 103 VLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKNQVCFPGGMVEESLDVNIIETSLREMEEEIGFPA-RSVDVLGVLRCDWSEVHKIT-GIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKV 319
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: A0A7S2USV2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USV2_9STRA) HSP 1 Score: 226 bits (576), Expect = 9.890e-69 Identity = 109/218 (50.00%), Postives = 156/218 (71.56%), Query Frame = 2
Query: 128 RVVLRPFNADYVAKSRHKHGQLDLTQGFTEAHMYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREETGIGSFEDVDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPVFTGGPFLIWGLTGYLLHRFVMDVVKQH 781
R +LRPF+ + + R K ++L++GF H++ ++KYL RMPR I++ RA+V++ LCNVDGV SILF+KR+ + H+NEVCFPGG VD D ++V T +RE+REE GI V+++GVLRCDWGEV S GVAVTPVVGF+ D++ +L+PN EVS+CFSVP+ LL+ ++W+ + VFTGGP+LIWGLT Y+L F+ +V+ ++
Sbjct: 153 RKLLRPFHHSNLERHRTKKRDMNLSEGFQAKHLHMIRKYLHRMPRQISRSASRRAAVLLTLCNVDGVPSILFSKRSDKVTSHKNEVCFPGGHVDEQ-DDNVVETCLREVREEIGIPD-TTVEILGVLRCDWGEVESIV-GVAVTPVVGFIDDLSLKKLKPNPDEVSNCFSVPIKSLLKRKNWVSGEYSKHVFTGGPYLIWGLTAYILDTFLKEVLMRY 367
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: A0A7S3V6J2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6J2_9STRA) HSP 1 Score: 226 bits (577), Expect = 2.470e-68 Identity = 110/220 (50.00%), Postives = 150/220 (68.18%), Query Frame = 2
Query: 131 VVLRPFNADYVAKSRHKHGQLDLTQGFTEAHMYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREET-GIGSFEDVDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPVFTGGPFLIWGLTGYLLHRFVMDVVKQHYV 787
++LRPF YV K R LDLT+GF A++ V+K L RMPR +++ RA V++PLCNV+GV +LF KR++ +R H +EVC PGG V D+ IV T +REM EE GIG + V+GVLRC+WGEV H GVAVTPVV ++G++ Q+ PNS EV+ F+VP+ L+ +HW+ +D AP FTGGP +IWGLTGY+++RFV DV+ + V
Sbjct: 208 MILRPFERKYVEKRRLSKINLDLTKGFDSANIQQVRKGLNRMPRRVSQAHSRRAGVVLPLCNVNGVPCVLFEKRSAQLRAHADEVCLPGGMVSAASDKSIVATCLREMDEEIEGIG---EATVLGVLRCNWGEV-HHLVGVAVTPVVCYIGEIGDSQISPNSDEVAEAFTVPLSLFLDQDHWVHRQDFAPTFTGGPHVIWGLTGYVMNRFVKDVLATYNV 423
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: A0A482SUV1_9ARCH (CoA pyrophosphatase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUV1_9ARCH) HSP 1 Score: 220 bits (561), Expect = 5.910e-67 Identity = 101/215 (46.98%), Postives = 151/215 (70.23%), Query Frame = 2
Query: 134 VLRPFNADYVAKSRHKHGQLDLTQGFTEAHMYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREETGIGSFEDVDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPVFTGGPFLIWGLTGYLLHRFVMDVVKQ 778
+L PF + +SR ++ DL+ GF+ + ++ YL RMPR++ +E RASV+IPLCNV G+ SILF +R++T+R H+ +VCFPGG V++GVD ++ T +REM EE G+ S + +V+G+LRC+W EVAS T G+AVTPVVG++G++ L+PN+ EV F+VP+ ++++ + WL P FTGGP IWGLTGYLL RF D++++
Sbjct: 137 LLFPFLKKNIEQSRMRNFSFDLSNGFSRKALLLIQGYLHRMPRYVYHGSERRASVVIPLCNVQGIPSILFERRSATVRTHKQQVCFPGGMVEYGVDASVIETCLREMEEELGVPS-DKTEVLGILRCNWNEVASMT-GIAVTPVVGYIGELKDITLKPNADEVEKYFTVPIHEIMDEKKWLSSSFTTPAFTGGPHTIWGLTGYLLERFRRDILQK 349
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: A0A7S2GLJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLJ1_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.580e-66 Identity = 98/182 (53.85%), Postives = 128/182 (70.33%), Query Frame = 2
Query: 233 VKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREETGIGSFEDVDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPVFTGGPFLIWGLTGYLLHRFVMDVVKQ 778
++K L RMPR +TK RASV++PLCNV+GV SILF KRA +R+H EVCFPGG V G D IV T +REM EE G+ + V+G+LRC+WGE+ T G+AVTPVVGF+G + LRPN EVS CF+VP+ +L EHW+ D+ P+FTG P++IWGLT Y+L RF+ DV+ +
Sbjct: 6 LRKALNRMPRQVTKAHRQRASVVLPLCNVNGVPSILFEKRALELRKHPGEVCFPGGMVSEGDDHTIVDTCLREMCEEVGLNE-QKTKVLGILRCNWGEITGIT-GIAVTPVVGFVGKLEHDSLRPNGDEVSECFTVPIADILNPEHWMHPADSPPIFTGAPYVIWGLTAYILDRFIQDVLAR 185
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: A0A7S0CGN4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGN4_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.420e-63 Identity = 99/193 (51.30%), Postives = 134/193 (69.43%), Query Frame = 2
Query: 206 GFTEAHMYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREETGIGSFED-VDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPVFTGGPFLIWGLTGYLLHRFVMDVVKQH 781
GF A + ++K L RMPR +T+ RASV++PLCNV G+ ILF KRA +R H +EVC PGG V D IV T++REM EE +G D V V+G+LRC+WGEVA T G+AVTPVV F+GD+ + L PN EV+ CF+VP+ LE + W+ + + AP+FTGGP +IWGLTGY+++RFV DV+ ++
Sbjct: 9 GFDTASLEMLRKGLMRMPRQVTQAHNKRASVVLPLCNVGGIPCILFEKRAGHLRAHPDEVCLPGGMVSENDDPSIVSTSLREMEEEI-VGIHRDNVSVLGILRCNWGEVAQIT-GIAVTPVVCFIGDLDEMNLHPNPDEVAECFTVPLSSFLEHDRWIHKENCAPIFTGGPHVIWGLTGYIVNRFVKDVLARY 199
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Match: B8CB77_THAPS (Nudix hydrolase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB77_THAPS) HSP 1 Score: 216 bits (549), Expect = 5.970e-63 Identity = 107/221 (48.42%), Postives = 145/221 (65.61%), Query Frame = 2
Query: 134 VLRPFNADYVAKSRHKHGQ-LDLTQG-FTEAHMYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHRNEVCFPGGKVDFGVDQHIVHTAIREMREETGIGSFEDVDVVGVLRCDWGEVASHTQGVAVTPVVGFLGDVAKGQLRPNSQEVSHCFSVPMGKLLESEHWLKERDAAPVFTGGPFLIWGLTGYLLHRFVMDVVKQHYVV 790
+LRP+ Y+ + RH G+ LD +G F + ++K L RM R ++ RA V++PLCNVDGV ILF KR+ +R H +EVC PGG V G D+ IV T +REM EE GI V+GVLRC+WGEV H GVAVTPVV ++G V QL PNS EV+ F+VP+ L+ + W+ ++ AP FTG P +IWGLTGY++HRFVMD+++++ VV
Sbjct: 329 ILRPYEPKYIHQRRHSKGKMLDFRRGGFDNQSIELIRKGLNRMHRRVSTAHSKRAGVVLPLCNVDGVPCILFEKRSRDLRAHPDEVCLPGGMVSEGGDKSIVQTCLREMEEEIGI-EHNAASVLGVLRCNWGEV-HHLVGVAVTPVVCYIGQVGMSQLNPNSDEVAEVFTVPLELFLDRDRWVHKKHYAPFFTGSPHIIWGLTGYIIHRFVMDIIERYTVV 547 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8222.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8222.1.1 >prot_P-wetherbeei_contig8222.1.1 ID=prot_P-wetherbeei_contig8222.1.1|Name=mRNA_P-wetherbeei_contig8222.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp MYSVKKYLTRMPRHITKLTEHRASVMIPLCNVDGVASILFTKRASTMRRHback to top mRNA from alignment at P-wetherbeei_contig8222:188..2218+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8222.1.1 ID=mRNA_P-wetherbeei_contig8222.1.1|Name=mRNA_P-wetherbeei_contig8222.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2031bp|location=Sequence derived from alignment at P-wetherbeei_contig8222:188..2218+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8222:188..2218+ >mRNA_P-wetherbeei_contig8222.1.1 ID=mRNA_P-wetherbeei_contig8222.1.1|Name=mRNA_P-wetherbeei_contig8222.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig8222:188..2218+ (Phaeothamnion wetherbeei SAG_119_79)back to top |