mRNA_P-wetherbeei_contig776.5.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: A0A6H5JUA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA4_9PHAE) HSP 1 Score: 279 bits (714), Expect = 1.250e-86 Identity = 154/305 (50.49%), Postives = 196/305 (64.26%), Query Frame = 2
Query: 194 EMAAGTVGGVTGMILVFPLDTVKCRLQTD--THYKGMTDVMRTMVKTEGATSLYRGLLSPVAGFGLLYAMSFSAYGAGGKFF-RSRAADAAVVXXXXXXXXXXXXXXSAACQLMVGEMTASGAFAGAVQAPVRQVFERVKAVMQVRHSAAGQSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRALLPAGQSPRDAHWGYNLA-AGAIAGVVQWLPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTMGELTRR 1096
E+A GT GGV GM +V+PLDT+K RLQT + Y +++V+ +M + EG SLYRGLLSPV G+G ++A+SFS+YG G+F R R A A +L + E +GA+AG + AP+RQVFERVK VMQVR QSPY WSG C+V LVR EG MGL RG+ +TM RE QF +YYP+YE+AK LLP ++ LA AG +AG V WLPP Y +DVIKTRM TA PG+Y + DC+ KT RAEG FRGLG +++RA P+HG+VF GYE T+ L R
Sbjct: 7 ELAGGTAGGVIGMTVVYPLDTIKSRLQTSGRSRYSSISNVLTSMARKEGTLSLYRGLLSPVVGYGAMFAVSFSSYGYAGRFLLRRREA-------------------KATDELTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGVAMGLCRGMGATMLREPLQFGIYYPSYEIAKDYLLPPDRTSTAVPEPMLLALAGGLAGCVMWLPPTYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLLGAR 292
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: A0A836C8G7_9STRA (Carnitine/acylcarnitine carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G7_9STRA) HSP 1 Score: 270 bits (689), Expect = 8.660e-84 Identity = 147/249 (59.04%), Postives = 170/249 (68.27%), Query Frame = 2
Query: 341 SLYRGLLSPVAGFGLLYAMSFSAYGAGGKFFRSRAADAAVVXXXXXXXXXXXXXXSAACQLMVGEMTASGAFAGAVQAPVRQVFERVKAVMQVRHSAAGQSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRALLPAGQSPRDAHWGYNLAAGAIAGVVQWLPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTMGEL 1087
SLYRGL SPV G+G+L+AMSFSA G ++ R+R AA V EMT +GA+AGAVQAP RQVFERVK VMQVR+ A G++PY WSG CLV LVR+EG +MGLFRG+ S REVPQFA+YYPAY++AKRA+LPA H L AG IAG VQWLPPIY+IDV+KT++ TA PG Y SIAD RKT EG FRGLGPSLVRA PLH +FAGYELTM L
Sbjct: 20 SLYRGLASPVLGYGVLFAMSFSANGQALRYLRNRDGRAANAPAS------------------VAEMTLAGAWAGAVQAPARQVFERVKGVMQVRNGAGGKAPYSWSGACLVDLVRTEGVQMGLFRGMGSQFIREVPQFALYYPAYDVAKRAILPADGHISPIHM---LLAGGIAGTVQWLPPIYNIDVLKTKIQTAAPGTYKSIADAARKTVATEGTKGLFRGLGPSLVRAFPLHATIFAGYELTMAHL 247
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: K8Z8A3_NANGC (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8A3_NANGC) HSP 1 Score: 249 bits (635), Expect = 3.350e-75 Identity = 141/312 (45.19%), Postives = 190/312 (60.90%), Query Frame = 2
Query: 185 FIDEMAAGTVGGVTGMILVFPLDTVKCRLQTDTHYKGMTDVMRTMVKTEGATSLYRGLLSPVAGFGLLYAMSFSAYGAGGKFFRSRAADAAVVXXXXXXXXXXXXXXSAACQLMVGEMTASGAFAGAVQAPVRQVFERVKAVMQVRHSAAG--QSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRALLPAGQSPRDAHWGYNLAAGAIAGVVQWLPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTMGELTRRREEAAH 1114
F+ E+ AGTVGGV G+ L+FPLDT K RLQ HYKG DV+R+MV+ G +SLYRGLLSP AGFG+ +A+SF+ YG G +FFR +L +GEMTASGA+AG +Q+P RQ+FER+K+VMQVR +A G + PYRWSG+CL ++ KM S + + E + R P+ +P H L AG +AG VQWLPP Y +DV+K+RM +A PG+Y+++ DC +K+Y+ EG G FFRGL +L+RA PL+ +F GYE T+ L + EE H
Sbjct: 7 FVHELLAGTVGGVVGITLIFPLDTAKVRLQAYPHYKGPIDVIRSMVREGGISSLYRGLLSPQAGFGVTFAISFAGYGQGTRFFRKGDNKR---------------------ELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLYEMNVRALQKMMAASNASGSSSNES----------NIVHRK--PSSSTPLPPH--LLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAAL-HQEEEIPH 282
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: W7TE76_9STRA (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE76_9STRA) HSP 1 Score: 248 bits (632), Expect = 5.620e-75 Identity = 139/290 (47.93%), Postives = 179/290 (61.72%), Query Frame = 2
Query: 317 MVKTEGATSLYRGLLSPVAGFGLLYAMSFSAYGAGGKFFRSRAADAAVVXXXXXXXXXXXXXXSAACQLMVGEMTASGAFAGAVQAPVRQVFERVKAVMQVRHSAAG--QSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRALL----------------------PAGQSPRDAHWGYNLAAGAIAGVVQWLPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTMGELTRRREEAAH 1114
MV+ G +SLYRGLLSP AGFG+ +A+SF+ YG G +FFR +L +GEMTASGA+AG +Q+P RQ+FER+K+VMQVR +A G + PYRWSG+CLVQLVR EG GLFRGL +T REVPQFAVYYP YE+ RAL P+ +P H L AG +AG VQWLPP Y +DV+K+RM +A PG+Y+++ DC +K+Y+ EG G FFRGL +L+RA PL+ +F GYE T+ L + EE H
Sbjct: 1 MVREGGISSLYRGLLSPQAGFGVTFAISFAGYGQGTRFFRKGDNKR---------------------ELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLVQLVRKEGLYNGLFRGLDATALREVPQFAVYYPLYEMNVRALQKMMAASNASGSSXNESNIVHRKPSSSTPLPPH--LLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAAL-HQEEEIPH 266
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: D7FLY9_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY9_ECTSI) HSP 1 Score: 222 bits (566), Expect = 2.360e-65 Identity = 123/262 (46.95%), Postives = 159/262 (60.69%), Query Frame = 2
Query: 317 MVKTEGATSLYRGLLSPVAGFGLLYAMSFSAYGAGGKFFRSRAADAAVVXXXXXXXXXXXXXXSAACQLMVGEMTASGAFAGAVQAPVRQVFERVKAVMQVRHSAAGQSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRALLPAGQSPRDA--HWGYNLAAGAIAGVVQWLPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTMGELTRR 1096
M EG S YRGLLSPVAG+G ++A+SFS+YG +F + XX ++ + E +A+G FAGA+ +P R VF+RVK VMQVR +PY WSG C LVR EG GLFRG+ STM RE+ Q A+YYP+YE+ K L S + + + AG IAG WLPP+Y +DVIKTR+ +A PG+Y DC+RKT R+EG FRGLG S++RA P+HG+VF GYE T+G LT R
Sbjct: 1 MAAHEGLMSWYRGLLSPVAGYGAMFAVSFSSYGMASRFLQRXXXXXXXXXXSG--------------EVFLWEKSAAGFFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAADLVRREGVMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLLARRSTSGKSSVPEPALQMLAGGIAGCATWLPPVYCLDVIKTRLQSAEPGVYGGTWDCLRKTVRSEGTPVLFRGLGLSMLRAFPMHGLVFVGYETTIGLLTTR 248
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: D7FM07_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM07_ECTSI) HSP 1 Score: 204 bits (518), Expect = 1.420e-58 Identity = 106/194 (54.64%), Postives = 131/194 (67.53%), Query Frame = 2
Query: 518 QLMVGEMTASGAFAGAVQAPVRQVFERVKAVMQVRHSAAGQSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRALLPAGQSPRDAHWGYNLA-AGAIAGVVQWLPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTMGELTRR 1096
+L + E +GA+AG + AP+RQVFERVK VMQVR QSPY WSG C+V LVR EG MGL RG+ +TM RE QF +YYP+YE+AK LP ++ LA AG +AG V WLPPIY +DVIKTRM TA PG+Y + DC+ KT RAEG FRGLG +++RA P+HG+VF GYE T+ L R
Sbjct: 24 KLTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGIAMGLCRGMGATMLREPLQFGIYYPSYEIAKDYFLPPDRTSTAVPEPILLALAGGLAGCVMWLPPIYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLLGAR 217
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: A0A7S1G657_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G657_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.390e-56 Identity = 120/298 (40.27%), Postives = 167/298 (56.04%), Query Frame = 2
Query: 203 AGTVGGVTGMILVFPLDTVKCRLQT-DTHYKGMTDVMRTMVKTEGATSLYRGLLSPVAGFGLLYAMSFSAYGAGGKFFRSRAADAAVVXXXXXXXXXXXXXXSAACQLMVGEMTASGAFAGAVQAPVRQVFERVKAVMQVRHSAAGQSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRALLPAGQSPRDAHWGYNLAAGAIAGVVQWLPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTMGELTR 1093
+G GV+G+ +V+PLDT K RLQT YKG D +RT+VK EG +LYRG+ +P+AG+G + ++ S YG R R A+AA +L + E A+GA AG V +R ERVKAVMQVR + G +R S CLV +R+EG + F +T+ RE+ Q Y+PA+E+ KRAL PAG S D + L AG +AG+ QWLPP+Y IDV+K+RM P G + +R + EG RG+GP++VRA P+H + EL L++
Sbjct: 55 SGLTAGVSGLTVVYPLDTTKLRLQTCPGEYKGAFDCLRTVVKREGFAALYRGMSAPIAGYGAINSLLLSTYGMTAVVLRRRNAEAA---------------GGVDRELSMEESMAAGAVAGVVSTVLRAPVERVKAVMQVRRNPDGTKVFRNSWRCLVGTMRTEGL-LSPFAAGRATLLRELFQGVAYFPAFEITKRALTPAGGSSNDLDFWRLLIAGGVAGITQWLPPMYCIDVVKSRMEVPPAGSTPGVLGVLRASVAKEGGMVLLRGMGPAMVRAFPMHATILTTNELMTAWLSK 336
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: A0A0L0D911_THETB (Carnitine/acylcarnitine n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D911_THETB) HSP 1 Score: 186 bits (471), Expect = 7.950e-51 Identity = 120/300 (40.00%), Postives = 168/300 (56.00%), Query Frame = 2
Query: 197 MAAGTVGGVTGMILVFPLDTVKCRLQTDTH-YKGMTDVMRTMVKTEGATSLYRGLLSPVAGFGLLYAMSFSAYGAGGKFFRSRAADAAVVXXXXXXXXXXXXXXSAACQLMVGEMTASGAFAGAVQAPVRQVFERVKAVMQVRHSA--AGQSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRAL---LPAGQSPRDAHWGYNLAAGAIAGVVQWLPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTM 1078
+ AG +GG+ G+ + FPLDT+K R+ + Y + +R+MV +EG SLYRGL +PVAG+G++ A++F G F +++ VV M + + AFAG VQ+ VR E K V Q H+ A P++ + + +VR++G LFRGL +T+AREVPQ+A+YYP Y L K AL LP+ +P AAGA+AG QW+P I +DVIKTRM AP G Y S+ C R + +G FF+G P+L+RAAPLH VF GY+ TM
Sbjct: 21 VVAGNMGGIVGLAISFPLDTLKVRMMMEPDKYVSLGATLRSMVASEGPASLYRGLTAPVAGYGVINAVAF------GSFEWAKSWLDEVVDETRAGS-------------MAQVVIPAAAFAGLVQSFVRGPVELAKTVQQAWHNPGNARAPPFKSAFHGIAHVVRNDG-PSALFRGLGATIAREVPQYAIYYPTYALLKPALTDALPSKYAPVAV-----AAAGALAGSAQWVPTI-PVDVIKTRMQGAPAGTYTSVVHCARTLWAEQGLATFFKGTAPALIRAAPLHAGVFLGYDTTM 294
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: A0A4D9D591_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D591_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.820e-48 Identity = 94/192 (48.96%), Postives = 120/192 (62.50%), Query Frame = 2
Query: 611 MQVRHSAAG--QSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRALL----------------------PAGQSPRDAHWGYNLAAGAIAGVVQWLPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTMGELTRRREEAAH 1114
MQVR +A G ++PYRWSG+CLVQLVR EG GLFRGL +T REVPQFAVYYP YE+ RAL P+ +P H L AG +AG VQWLPP Y +DV+K+RM +A PG+Y+++ DC +K+Y+ EG G FFRGL +L+RA PL+ +F GYE T+ L + EE H
Sbjct: 1 MQVRKAAGGVDKAPYRWSGECLVQLVRKEGLYNGLFRGLDATALREVPQFAVYYPLYEMNVRALQKMMAASNASGSSSHEKNRVNRKPSSSTPLPPH--LLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAAL-HQEEEIPH 189
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Match: A0A8H7BX49_9FUNG (Carnitine transporter n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BX49_9FUNG) HSP 1 Score: 177 bits (450), Expect = 1.030e-47 Identity = 113/315 (35.87%), Postives = 168/315 (53.33%), Query Frame = 2
Query: 146 PGSVITTTMQSGHFIDEMAAGTVGGVTGMILVFPLDTVKCRLQTDTH-YKGMTDVMRTMVKTEGATSLYRGLLSPVAGFGLLYAMSFSAYGAGGKFFRSRAADAAVVXXXXXXXXXXXXXXSAACQLMVGEMTASGAFAGAVQAPVRQVFERVKAVMQVRHSAAGQSPYRWSGDCLVQLVRSEGWKMGLFRGLSSTMAREVPQFAVYYPAYELAKRALLPAGQSPRDAHWGYNLAAGAIAGVVQW---LPPIYSIDVIKTRMTTAPPGMYNSIADCVRKTYRAEGAGAFFRGLGPSLVRAAPLHGIVFAGYELTM 1078
P V +TT+ S I +G GG+ +++ P D VK RLQT YK D + ++K +G LYRG+ +P+A ++A+SF +Y G K S +D L + E+T +GAF+ ER+K +MQ++ G+ Y+ D QL + EG +FRG +T+ R+ P A Y+ AYEL K+AL PAG P D + G L AG +AGV W +PP DV+K+R+ +AP G Y+ +ADC++KT +A+G GA F+GLGP+++RA P + F G E +M
Sbjct: 17 PVEVKSTTVSS---IKSFLSGGFGGMAAVLVGQPFDLVKVRLQTSEGLYKNTADCFKQIIKKDGVLGLYRGMATPLASITPIFAVSFFSYDLGKKIVYSVRSD------------------KEDKSLSLAEITFAGAFSAVPTTFFMAPSERIKVLMQIQ-GQGGEQKYKGPLDAARQLYK-EGGLRSIFRGTGATLLRDSPGSAAYFVAYELVKKALTPAGSRPEDLNPGAVLFAGGMAGVAMWTIAIPP----DVLKSRIQSAPAGTYSGLADCLKKTIKADGPGALFKGLGPAMLRAFPANAATFLGVEYSM 304 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig776.5.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig776.5.4 >prot_P-wetherbeei_contig776.5.4 ID=prot_P-wetherbeei_contig776.5.4|Name=mRNA_P-wetherbeei_contig776.5.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp MQSGHFIDEMAAGTVGGVTGMILVFPLDTVKCRLQTDTHYKGMTDVMRTMback to top mRNA from alignment at P-wetherbeei_contig776:4039..6867+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig776.5.4 ID=mRNA_P-wetherbeei_contig776.5.4|Name=mRNA_P-wetherbeei_contig776.5.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2829bp|location=Sequence derived from alignment at P-wetherbeei_contig776:4039..6867+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig776:4039..6867+ >mRNA_P-wetherbeei_contig776.5.4 ID=mRNA_P-wetherbeei_contig776.5.4|Name=mRNA_P-wetherbeei_contig776.5.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig776:4039..6867+ (Phaeothamnion wetherbeei SAG_119_79)back to top |