mRNA_P-wetherbeei_contig7735.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7735.3.1
Unique NamemRNA_P-wetherbeei_contig7735.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 2.560e-145
Identity = 316/678 (46.61%), Postives = 393/678 (57.96%), Query Frame = 1
Query:    7 VAELADPMLDFLHWFNTVGAPKLGGGHSLSLSFRDILAWAAFVAGAC--KVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAVVAAVPFA-ERAAARLELFEGGGE-----------VHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPA--APPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAADDGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDAT--AAAD----ELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSVKAGTPEMAAATPVPAEEDGLWESLGLFPDVKVTPTEVTIGSTVLKRGRDASAVSS------GMSARLTALPLSLRRPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQ 1956
            +  +A PMLDF  WFN+  +  LGGGH LSLS RD+L+WA F+  +     P +    P         L PW+A+VHG+AL+LLDG+GLG G+S   V +L     + +   +P   E+ +A  +L   GGE           V  +T     V +EDA  +  G          FG+ PF    GP     +  A L FS+ APTT++NLRRVLRA+Q+RKAVLLEGSPGVGK+SL++ALAAA GH LVRINLSEQTDVSDL GSDLP+PD      G+  G     +AG                       ARF W DGVFL ALK G WVLLDELNLA+QSVLE LNACLDHRAEV+IPEL R+F+CP  F+VFAAQNPLGQGGGRKGLP+SFL+RFT+VYV+ LT  D+L+IA  +FP++A     S    + SDA   AA D    +   ++  P  + S+L RMIAFN       S +Q DT  A  YGR G+PWEFNLRDVFR C      +GG                                           +G  P +KVTP  + +G TVL RG   +  S+      G+ A +T +PL+LRRPL ALAR VAMGWPALV+G R SGK+ ++  LAA  G  L  VA+TP+ DVTELLGCFEQ
Sbjct: 1074 LTRMAGPMLDFAWWFNSTASSSLGGGHGLSLSVRDLLSWAGFITSSVTSSSPDSRSSEP--------GLRPWEAYVHGSALILLDGMGLGAGLSPSSVVRLRQACVKFLKGQIPSCPEQTSALGQLDRDGGERPDKLTSLAFEVRELTS----VKMEDAAEETTG-----TPRFVFGVEPFFTPCGPAKVLGSESANLDFSVEAPTTSKNLRRVLRALQIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDS---GEQTGQPTEGSAGNN---------------------ARFSWCDGVFLSALKAGRWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFKCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSLAAPPSPSS-SPVSSDAALIAATDGNSQDNEKSSCIPCDAASMLSRMIAFN-------SLVQEDTMAAGRYGRRGSPWEFNLRDVFRCCSGW--REGG-------------------------------------------IGTHPVLKVTPEWMQVGQTVLPRGCWGNGTSASDGDADGLRAGIT-IPLALRRPLQALARCVAMGWPALVIGHRGSGKSGIIKGLAAGVGARLTEVAMTPSVDVTELLGCFEQ 1656          
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: A0A835Z947_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z947_9STRA)

HSP 1 Score: 459 bits (1181), Expect = 6.940e-140
Identity = 322/664 (48.49%), Postives = 373/664 (56.17%), Query Frame = 1
Query:   16 LADPMLDFLHWFNTVGA-------PKLGGGHSLSLSFRDILAWAAFVAGACKVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAVVAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAADDGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSVK-AGTPEMAAATPVPAEEDGLWESLGLFPDV----KVTPTEVTIGSTVLKRG----RDASAVSSGMSARLTALPLSLRRPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV 1959
            L  PML F+ WFN  GA                ++S RD+LAWA FV       GA     A A GAA  L PW AF HGAALV+LDGLGLGTG++   VA+  A A   ++A +P                                  +D A   A  V    FG  PF I  GPLP  PPA LRFSLGAPTTARNLRRVLRA+QLRKAVLLEGSPGVGK++LV ALAAAAGH LVRINLSEQTD+SDLMGSDLP+  AA D                            XXXXXXXXX   F W DGVFLRAL+ G WVLLDELNLASQ+VLE LNACLDHRAEVF+PEL R FRCP  FRVFAAQNPL QGGGRKGLPKSFLNRFT+V+V++L   D++HIA+ RFPA+A                                              L   + + HDT EA AYGRHGAPWEFNLRDV+RWC+LM+ EQ   GA+D +    AG A++       T  +            L     +FP+           ++ G  VL RG              +A+L   P +LRRPL A+AR VA  WP L+VG RA+GKT  V  LAAAAG  L  +A+TPATDV+ELLGCFEQV
Sbjct: 1251 LVAPMLRFVSWFNGGGAGXXXXXXXXXXXXXXAAMSLRDVLAWARFVVDTASAEGAQ---QALATGAAR-LPPWLAFAHGAALVVLDGLGLGTGLAPEGVARARAAACTQLLALMPA-------------------------------GSTDRAAAAAHRV----FGADPFFIPAGPLP--PPADLRFSLGAPTTARNLRRVLRALQLRKAVLLEGSPGVGKTALVTALAAAAGHPLVRINLSEQTDLSDLMGSDLPV--AASD----------------------------XXXXXXXXXGPAFAWCDGVFLRALRAGHWVLLDELNLASQAVLEGLNACLDHRAEVFVPELGRAFRCPPTFRVFAAQNPLSQGGGRKGLPKSFLNRFTKVFVDALGPDDLMHIASGRFPALA----------------------------------------------LDCGALVHHDTCEALAYGRHGAPWEFNLRDVYRWCDLMIAEQQPRGASDTA----AGAAAWHPEHFLDTIYLLRFRTAADRRAVLARYREVFPEAFGGGDSAQPSLSAGQAVLPRGVWGGXXXXXXXXXPAAQLP--PAALRRPLQAMARCVAQRWPCLLVGHRATGKTTAVHWLAAAAGAELCSIALTPATDVSELLGCFEQV 1791          
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: A0A5D6XYG6_9STRA (VWFA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYG6_9STRA)

HSP 1 Score: 401 bits (1030), Expect = 8.090e-119
Identity = 286/656 (43.60%), Postives = 368/656 (56.10%), Query Frame = 1
Query:   16 LADPMLDFLHWFNTVGAPKLGGGHSLSLSFRDILAWAAFVAGACKVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAVVAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAADDGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSVKAGTPEMAAATPVPAEEDGLWESLGLFP------DVKVTPTEVTIGSTVLKRGRDASAVSSGMSARLTALPLS--LRRPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV 1959
            L DP+L F+  FN     +LGG  +++L  RDIL+W  F+    K          +A  +++ + PW AFV GAAL +LDGLGLG   + +   +    A   ++  VP  +          G  +  + +L      ++D  S+      +  D   FG++PF+I RGP   A   +  FSL APTT  NL RVLRAMQ+ + ++LEGSPGVGK+SL++ALA+A+GHRLVRINLSEQTD+SDL GSDLP            A  GD S++                          F W DGVFLRALK GDWVLLDELNLASQSVLE LN+CLDHR  V+IPEL+R F CP  FRVFAAQNPL QGGGRKGLPKSFLNRFTRV+VE+L   D++HIA++ +P +A        GD  S A A          T L + SLL +MIAFN       S +  DT  A  YGR GAPWEFNLRDVFR+CEL+  +Q  SG+ +  +       S+         M +A    A      E  G+ P       ++V+  +V IGS VL R       S  +  +  + PL   L +P+ AL   V M WPAL+VG  ASGKT+ V  LAA +G +L  + ++  TD TELLGCFEQV
Sbjct: 1732 LCDPILSFVKMFNAANG-RLGGCGAVTL--RDILSWINFITSVMKE---------SAGSSSSRVSPWVAFVQGAALSVLDGLGLGADSALHTAIRAREEAYAYLLDLVPSDD---------VGTKQQVLASLNATKQAIDDRISNL-----NSADLTAFGISPFMIPRGPDSTARQPS--FSLKAPTTMANLYRVLRAMQVSRPIILEGSPGVGKTSLISALASASGHRLVRINLSEQTDISDLFGSDLPA-----------AARGDASDS----------------------PNGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGTVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSIYPTLA--------GDRASGAPA----------TRLEATSLLEKMIAFN-------STVHDDTMVACKYGRMGAPWEFNLRDVFRFCELLERQQIASGSPEELQA-----LSYLVNFIYVERMRSARDRAAISIRFEEFFGVKPMDLRNVSLRVSEDQVAIGSAVLAR-------SGRLRVQRVSPPLFNFLLKPMEALVHCVNMNWPALLVGPPASGKTSAVRLLAALSGNTLHELGMSAGTDATELLGCFEQV 2289          
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: M4C1N6_HYAAE (Midasin n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1N6_HYAAE)

HSP 1 Score: 398 bits (1022), Expect = 9.110e-118
Identity = 283/660 (42.88%), Postives = 365/660 (55.30%), Query Frame = 1
Query:    4 AVAELADPMLDFLHWFNTVGAPKLGGGHSLSLSFRDILAWAAFVAGACKVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAVVAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAADDGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSVKAGTPEMAAATPVPAEEDGLWESLGLFPD------VKVTPTEVTIGSTVLKRGRDASAVSSGMSARLTALPLS--LRRPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV 1959
            A+A L  P+L F+  FNT      G G   +++ RDIL+W  F+    K          TA         W AFV GAAL +LDGLGLG+  + + V +    A   ++A VP  E    + ++ E    ++V TLP     V+ +         DGV    FGM PF I RGP+ A   ++  FSL APTT  NL+RVLRAMQ+ + ++LEGSPGVGK+SL++ALAAA+GHRLVRINLSEQTD+SDL GSDLP+     D   D AG G+ S                            F W DGVFLRALK GDWVLLDELNLA QSVLE LN+CLDHR  V+IPEL+R F CP+ FRVFAAQNPL QGGGRKGLPKSFLNRFTRV+VE+L   D++HIA++ +P +            V D      +     KT      L+ RM+AFNR        +  DT     YGR GAPWEFNLRDVFR+CEL+  +   + +  +     +   +F  V+     M +A           +  G+ P       ++V+   V +GS +L+R         G+     A P+   L +P+ AL   V M WPAL+VG  ASGKT+ V  LAA +G +L  + ++  TD TELLGCFEQV
Sbjct: 1728 ALASLCHPILSFVTIFNTANGGACGCG---AVTLRDILSWVNFITSVVKKEKTDSSLEVTA---------WTAFVQGAALAILDGLGLGSDKALHTVLKAREEAYGYLLALVPD-ENQYIKEKVIE---SLNVTTLP-----VKCSIDQLISFATDGVPEETFGMTPFFIPRGPVGAQRKSS--FSLKAPTTMSNLQRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPVAFGGKDS--DEAGRGNASGL--------------------------FEWCDGVFLRALKAGDWVLLDELNLAPQSVLEGLNSCLDHRGSVYIPELDREFECPSSFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTLHSA---------VVDTDVGLSDPKYTGKT------LVERMVAFNRV-------VHEDTMVNCRYGRLGAPWEFNLRDVFRFCELLSRQIQVADSFKSQVQAMSYYVNFIYVE----RMRSARDRTFISRRFEKLFGVKPTDRSAVPLRVSANFVEVGSALLER--------QGVHVNCVAPPIFNFLLKPMEALVHCVNMSWPALLVGPSASGKTSSVRLLAALSGNTLHELGMSAGTDATELLGCFEQV 2302          
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: K3X0F1_GLOUD (Midasin n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0F1_GLOUD)

HSP 1 Score: 397 bits (1020), Expect = 1.700e-117
Identity = 295/667 (44.23%), Postives = 371/667 (55.62%), Query Frame = 1
Query:    1 SAVAELADPMLDFLHWFNTVGAPKLGGGHSLSLSFRDILAWAAFVAGACKVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLG------TGMSRYDVAQLHAVAA----EAVVAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAADDGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSV-KAGTPEMAAATPVPAEEDGLWESLGLFP-DVKVTPTEVTIGSTVLKRGRDASAVSSGMSARLTALPLS--LRRPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV 1959
            SA+A L DP+L F+  FN +   KLGG  +++L  RDIL+W  F+    +   A+          ++ + PW AFV GAAL +LDGLGLG      T M   D A  + +      +AVV A   A   A +                     ++D  S+      + VD   FG+ PF+I RGP P     +  FSL APTT  NL RVLRAMQ+ + ++LEGSPGVGK+SL++ALA+A+GHRLVRINLSEQTD+SDL GSDLP      D    G    D SN G                         F W DGVFLRALK GDWVLLDELNLASQSVLE LN+CLDHR  V+IPEL+R F CP  FRVFAAQNPL QGGGRKGLPKSFLNRFTRV+VE+L   D++ IA++ +P +A   V      +V+ AT +             + SLL +MIAFN       S +  DT  A  YGR GAPWEFNLRDVFR+CEL+   Q  S   D          +F  V +  +P   A   +  EE    + + L    ++++ T V IG+  LKR R A  V         + PL   L +P+ ALA  V M WPAL+VG  ASGKT+ V  LAA +G +L  + ++  TD TELLGCFEQV
Sbjct: 1729 SALAPLCDPILQFVQKFNVLNG-KLGGVGAVTL--RDILSWIHFITSVMQQESAS----------SSNVSPWTAFVQGAALSILDGLGLGSDSALNTAMRARDEAYTYLLELVPNDDAVVKASVLASLNATKQA-------------------IDDRISNL-----NSVDQRTFGIYPFVIPRGPDPTLKKPS--FSLKAPTTMSNLYRVLRAMQVSRPIILEGSPGVGKTSLISALASASGHRLVRINLSEQTDISDLFGSDLPAASNQSDSSTAGESKSD-SNDGSSS--------------------GMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGTVYIPELDRAFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIRIASSMYPLLATTDVTESTKMVVTPATLSVGN----------TKSLLEKMIAFN-------STVHTDTMVACKYGRMGAPWEFNLRDVFRFCELLQQHQH-SATTDEELQALRYFVNFIYVERMRSPRDRALISLRFEEFFGVKPMDLSNVSLRISETHVEIGNAFLKR-RQALRVQR------VSPPLFNFLLKPMEALAHCVNMNWPALLVGPPASGKTSAVRLLAALSGNTLHELGMSAGTDATELLGCFEQV 2310          
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: W2Q5P2_PHYPN (VWFA domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2Q5P2_PHYPN)

HSP 1 Score: 396 bits (1017), Expect = 4.320e-117
Identity = 283/659 (42.94%), Postives = 367/659 (55.69%), Query Frame = 1
Query:    7 VAELADPMLDFLHWFNTVGAPKLGGGHSLSLSFRDILAWAAFVAGACKVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAVVAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAADDGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSVKAGTPEMAAATPVPAEEDGLWESLGLFP------DVKVTPTEVTIGSTVLKRGRDASAVSSGMSARLTALPLS--LRRPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV 1959
            +A L DP+L F+  FN       G G   +++ RDIL+W  F+    K            +G++  +  W AFV GAAL +LDGLGLG+  + +   +    A   ++A VP  +    +  +      ++V TL      V+++        ++    G FG++PFLI RGP P     A  FSL APTT  NL RVLRAMQ+ + ++LEGSPGVGK+SL++ALAAA+GHRLVRINLSEQTD+SDL GSDLP   + DD   D  G    +N G                         F W DGVFLRALK GDWVLLDELNLASQSVLE LN+CLDHR  V+IPEL+R F CP  FRVFAAQNPL QGGGRKGLPKSFLNRFTRV+VE+L   D++HIA++ +P +      S     +SDA              L   +LL R+I FNR        +  DT  +  YGR GAPWEFNLRDVFR+C+L+  +   +  A+      +   SF  V+     M +A           E  G+ P       ++++   V IGS +L+R +D       M     A PL   L +P+ ALA  V M WPAL+VG  ASGKT+ V  LAA +G +L  + ++  TD TELLGCFEQV
Sbjct: 1740 LASLCDPILGFVKTFNEANG---GFGGCGAVTLRDILSWINFITSVVKKQE---------VGSSVKVTAWTAFVQGAALSILDGLGLGSDKALHTALKAREEAYRYLLALVPDEDHLVKQKVIDS----LNVTTLS-----VDNSIDQLNSFASEETAEGKFGISPFLIPRGPDPVRRKPA--FSLKAPTTMSNLYRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPDDNVDDKDGK--HTNGGSSS--------------------GMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTLH----CSVEEADMSDAA-------------LSGKTLLERIIGFNRA-------VHEDTMVSCKYGRLGAPWEFNLRDVFRFCDLLKQQVQLADNAEHQLQALSYYVSFIYVE----RMRSARDRELISRRFEEFFGVRPMDLSAVSLRMSADFVEIGSALLERRQD-------MPIGRVAPPLFNFLLKPMEALAHCVNMSWPALLVGSPASGKTSSVRLLAALSGNTLHELGMSAGTDATELLGCFEQV 2318          
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: A0A329RXK7_9STRA (Midasin n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RXK7_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 1.080e-116
Identity = 281/659 (42.64%), Postives = 368/659 (55.84%), Query Frame = 1
Query:    7 VAELADPMLDFLHWFNTVGAPKLGGGHSLSLSFRDILAWAAFVAGACKVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAVVAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAADDGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSVKAGTPEMAAATPVPAEEDGLWESLGLFP------DVKVTPTEVTIGSTVLKRGRDASAVSSGMSARLTALPLS--LRRPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV 1959
            +A L DP+L F+  FN       G G   +++ RDIL+W  F+    K            + ++  +  W AFV GAAL +LDGLGLG+  + +   +    A   ++A VP  +    +  +      ++V TL      VE++        ++    G FG++PFLI RGP P     A  FSL APTT  NL RVLRAMQ+ + ++LEGSPGVGK+SL++ALAAA+GHRLVRINLSEQTD+SDL GSDLP   + D+     A  G+ +  G                         F W DGVFLRALK GDWVLLDELNLASQSVLE LN+CLDHR  V+IPEL+R F CP  FRVFAAQNPL QGGGRKGLPKSFLNRFTRV+VE+L   D++HIA++ +P +       C G     A AA  +   + KT      LL RMI FNR        +  DT  +  YGR GAPWEFNLRDVFR+C+L+  +   + +A+      +   +F  V+     M +A           E  G+ P       ++++   V IGS +L+R +D       M     A P+   L +P+ AL   V M WPAL+VG  ASGKT+ V  LAA +G +L  + ++  TD TELLGCFEQV
Sbjct: 1726 LASLCDPILSFVKTFNEANGGVGGCG---AVTLRDILSWINFITSVVKKQE---------VDSSVKVAAWTAFVQGAALSILDGLGLGSDKALHTALKAREEAYRYLLALVPDEDHLVKQKVIDS----LNVTTLS-----VENSIDQLNSFASEEAAEGKFGVSPFLITRGPDPVRRKPA--FSLKAPTTMSNLFRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPDESAD--ANDGNKTKGGSSS--------------------GMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTL------HCSG-----AEAAMSDSTLSGKT------LLERMIGFNRA-------VHEDTMVSCKYGRLGAPWEFNLRDVFRFCDLLKQQAQLADSAEHQLQALSYYVTFIYVE----RMRSARDRELISRRFEEFFGVRPMDLSAVSLRMSADFVEIGSALLERRQD-------MPLGRVAPPVFNFLLKPMEALVHCVNMSWPALLVGPPASGKTSSVRLLAALSGNTLHELGMSAGTDATELLGCFEQV 2304          
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: D0NH58_PHYIT (Midasin n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NH58_PHYIT)

HSP 1 Score: 392 bits (1008), Expect = 6.710e-116
Identity = 285/660 (43.18%), Postives = 370/660 (56.06%), Query Frame = 1
Query:    7 VAELADPMLDFLHWFNTVGAPKLGGGHSLSLSFRDILAWAAFVAGACKVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAVVAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAAD-DGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSVKAGTPEMAAATPVPAEEDGLWESLGLFP------DVKVTPTEVTIGSTVLKRGRDASAVSSGMSARLTALPLS--LRRPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV 1959
            +A L DP+L F+  FN      LGG  +++L  RDIL+W  F+    K     L    TA         W AFV GAAL +LDGLGLG+  + +   +    A   ++A VP  +    + ++ +    ++V TL      VE++        +     G FG++PFLI RGP P     A  FSL APTT  NL RVLRAMQ+ + ++LEGSPGVGK+SL++ALAAA+GHRLVRINLSEQTD+SDL GSDLP   + D D  G+ A  G  S                            F W DGVFLRALK GDWVLLDELNLASQSVLE LN+CLDHR  V+IPEL+R F CP  FRVFAAQNPL QGGGRKGLPKSFLNRFTRV+VE+L   D++HIA++ +P +       C  + +  + +A           L   +LL R+I FNR        +  DT  +  YGR GAPWEFNLRDVFR+C+L+  +   +G A+      +   +F  V+     M +A           E  G+ P       ++++   V IGS VL+R ++       M     A P+   L +P+ ALA  V M WPAL+VG  ASGKT+ V  LAA +G +L  + ++  TD TELLGCFEQV
Sbjct: 1730 LASLCDPILGFVKTFNEANG-GLGGCGAVTL--RDILSWINFITSVMKKQEVDLSVKVTA---------WTAFVQGAALSILDGLGLGSDKALHTALKAREAAYSYLLALVPD-DDVLVKQKVVD---SLNVTTLS-----VENSIDQLNSFASVKTAEGKFGISPFLIPRGPDPVRRKPA--FSLKAPTTMSNLYRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPDEDKDGNKANGGGSSGM--------------------------FEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTL------HCSVEEMDMSDSA-----------LSGKTLLERIIGFNRA-------VHEDTMVSCKYGRLGAPWEFNLRDVFRFCDLLKQQAQLAGNAEHRLQALSYYVNFIYVE----RMRSARDRELISRRFEEFFGVRPMDLSAVSLRMSANFVEIGSAVLERQQE-------MPIGRVAPPVFNFLLKPMEALAHCVNMSWPALLVGSPASGKTSSVRLLAALSGNTLHELGMSAGTDATELLGCFEQV 2305          
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: A0A7S3VEM6_9STRA (Midasin n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VEM6_9STRA)

HSP 1 Score: 385 bits (990), Expect = 1.650e-113
Identity = 266/649 (40.99%), Postives = 350/649 (53.93%), Query Frame = 1
Query:   28 MLDFLHWFNT-VGAPKLGGGHSLSLSFRDILAWAAF-VAGACKVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAVVAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAADDGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSVKAGTPEMAAATPVPAEEDGLWESLGLFPDVKVTPTEVTIGSTVLKRGRDASAVSSGMSARLTALPLSLR---RPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV 1959
            ML +++WFN  + +  +       LS RD+LAWA F V   CK     +               W A+ HGA+L+ LDGLGLGTG+S  D +    +A   +   +   E  A   + F+G               +++++           D G FG+ PF I+ G +   PP+ L F L APTT  NLRRVLRAMQ+ K +LLEGSPGVGK+SL++ALA A+GH LVRINLSEQTD+SDLMGSDLPMPD A          GD  N                         + F W DG  L+A+K+GDWVLLDELNLASQSVLE LN+CLDHRA V+IPEL  TF CP  FR+FAAQNPL QGGGRKGLPKSFLNRFT+VYVE+L+  D+  I  A+FP +                            TP    +L+ +++ FN       + IQ D  E+R YG+ G+PWEFNLRDVFRWC+L+       G  +              ++        A     E  G  + +   P ++V    V +G  VLKR  + + +S   S  L + P  L+   RP+ A+A  V M WP L+VG  +SGK+ ++ +LA +  M L  VA+TP++DV EL+GCFEQV
Sbjct: 1833 MLTYVNWFNIDICSKPMSTCADFLLSLRDVLAWARFFVETICKNEDFDV---------------WSAYAHGASLMHLDGLGLGTGLSHEDASGTKKMAKTYLSNQIATGESVAGFEDEFDG---------------IDESKL---------YDEGKFGVHPFRIKMG-VKKVPPS-LGFKLSAPTTGMNLRRVLRAMQISKPILLEGSPGVGKTSLISALATASGHELVRINLSEQTDISDLMGSDLPMPDEA---------LGDEENT---------------------STGSSFKWCDGALLKAIKNGDWVLLDELNLASQSVLEGLNSCLDHRASVYIPELGETFHCPLTFRIFAAQNPLAQGGGRKGLPKSFLNRFTKVYVEALSKDDLQGIVEAKFPML----------------------------TP----ALVEKIVNFN-------NCIQKDI-ESRKYGQLGSPWEFNLRDVFRWCDLISNHYQNHGTIEQGAFSDT--IYMQRLRCDNDRFLLAKRY-EECFGSRDCIRDDPTIEVLDNNVRVGMAVLKR--NTNILSPSESIILGSEPSLLKNLVRPMEAVALCVEMSWPCLLVGGSSSGKSTILKSLAESCNMHLEEVALTPSSDVNELIGCFEQV 2365          
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Match: H3GJC4_PHYRM (VWFA domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJC4_PHYRM)

HSP 1 Score: 385 bits (990), Expect = 1.670e-113
Identity = 278/657 (42.31%), Postives = 355/657 (54.03%), Query Frame = 1
Query:    7 VAELADPMLDFLHWFNTVGAPKLGGGHSLSLSFRDILAWAAFVAGACKVPGAALPAPATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAVVAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGVDGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKAVLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDAADDGGGDGAGYGDCSNAGXXXXXXXXXXXXXXXXXXXXXXXARFMWQDGVFLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPAGFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFPAIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSLPSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADASKLGGAGGASFSSVKAGTPEMAAATPVPAEEDGLWESLGLFP------DVKVTPTEVTIGSTVLKRGRDASAVSSGMSARLTALPLSLRRPLHALARAVAMGWPALVVGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV 1959
            +A L DP+L F+  FN       G G   +++ RDIL+W  F+    K          TAL          AFV GAAL +LDGLGLG+  + +   +    A   ++A VP  ++   +  +      ++V  L      V++         ++    G FG++PFLI RGP P     A  FSL APTT  NL RVLRAMQ+ + ++LEGSPGVGK+SL++ALAAA+GHRLVRINLSEQTD+SDL GSDLP   A+  G G+ A  G  S                          A F W DGVFLRALK GDWVLLDELNLASQSVLE LN+CLDHR  V+IPEL+R F CP  FRVFAAQNPL QG GRKGLPKSFLNRFTRV+VE+L   D++HIA++ +P +    V +   D V                     SLL RMI FNR        +  DT  +  YGR GAPWEFNLRDVFR+C+L+  +    G         +   +F  V+     M +            E  G+ P       ++++   V IGS++L R +DA      M      L   L +P+ AL   V M WPAL+VG  ASGKT+ V  LA  +G +L  + ++  TD TELLGCFEQV
Sbjct: 1719 LASLCDPILSFVKTFNEANGGTGGCG---AVTLRDILSWVNFITSVVKKQDVDSSLKVTAL---------TAFVQGAALSILDGLGLGSDKALHTALKARDEAYRYLLALVPDDDQVVKQKVIDS----LNVTKLS-----VDNNIDQLNSYASEETTEGKFGISPFLISRGPDPVRRKPA--FSLKAPTTMSNLHRVLRAMQVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPA--ASPSGDGESAEGGSSS--------------------------AMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGSGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSLYPTLHCSVVETSMSDSV-----------------FVGQSLLERMIGFNRA-------VHEDTMVSCRYGRLGAPWEFNLRDVFRFCDLLKQQSQLVGTTHRQLQALSYYVNFIYVE----RMRSTRDRELISRRFEEFFGVKPMDLSAVSLRMSSDFVEIGSSLLARRQDAQ-----MGRVAPPLFNFLLKPMEALVHCVNMSWPALLVGPPASGKTSSVRLLATLSGNTLHELGMSAGTDATELLGCFEQV 2291          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7735.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL28_ECTSI2.560e-14546.61Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A835Z947_9STRA6.940e-14048.49P-loop containing nucleoside triphosphate hydrolas... [more]
A0A5D6XYG6_9STRA8.090e-11943.60VWFA domain-containing protein n=1 Tax=Pythium bra... [more]
M4C1N6_HYAAE9.110e-11842.88Midasin n=1 Tax=Hyaloperonospora arabidopsidis (st... [more]
K3X0F1_GLOUD1.700e-11744.23Midasin n=1 Tax=Globisporangium ultimum (strain AT... [more]
W2Q5P2_PHYPN4.320e-11742.94VWFA domain-containing protein n=9 Tax=Phytophthor... [more]
A0A329RXK7_9STRA1.080e-11642.64Midasin n=2 Tax=Phytophthora TaxID=4783 RepID=A0A3... [more]
D0NH58_PHYIT6.710e-11643.18Midasin n=2 Tax=Phytophthora infestans TaxID=4787 ... [more]
A0A7S3VEM6_9STRA1.650e-11340.99Midasin n=1 Tax=Chaetoceros debilis TaxID=122233 R... [more]
H3GJC4_PHYRM1.670e-11342.31VWFA domain-containing protein n=1 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7735contigP-wetherbeei_contig7735:591..2843 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FL28
PFAMsAAA_5
Model size1959
Max annot lvl2759|Eukaryota
KEGG koko:K14572
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
Exons3
Evalue9.12e-145
EggNOG OGsCOG5271@1|root,KOG1808@2759|Eukaryota
DescriptionNuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
Cds size1932
COG categoryM
BRITEko00000,ko00001,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186998.1475027-CDS-P-wetherbeei_contig7735:590..9501683186998.1475027-CDS-P-wetherbeei_contig7735:590..950Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7735 591..950 -
1683186998.1579323-CDS-P-wetherbeei_contig7735:1142..13701683186998.1579323-CDS-P-wetherbeei_contig7735:1142..1370Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7735 1143..1370 -
1683186998.1700194-CDS-P-wetherbeei_contig7735:1472..28161683186998.1700194-CDS-P-wetherbeei_contig7735:1472..2816Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7735 1473..2816 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186998.1832404-UTR-P-wetherbeei_contig7735:2816..28431683186998.1832404-UTR-P-wetherbeei_contig7735:2816..2843Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7735 2817..2843 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7735.3.1prot_P-wetherbeei_contig7735.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7735 591..2816 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7735.3.1

>prot_P-wetherbeei_contig7735.3.1 ID=prot_P-wetherbeei_contig7735.3.1|Name=mRNA_P-wetherbeei_contig7735.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=644bp
MLDFLHWFNTVGAPKLGGGHSLSLSFRDILAWAAFVAGACKVPGAALPAP
ATALGAAAALLPWQAFVHGAALVLLDGLGLGTGMSRYDVAQLHAVAAEAV
VAAVPFAERAAARLELFEGGGEVHVITLPGGGVGVEDARSDAAGVGADGV
DGGWFGMAPFLIRRGPLPAAPPAALRFSLGAPTTARNLRRVLRAMQLRKA
VLLEGSPGVGKSSLVAALAAAAGHRLVRINLSEQTDVSDLMGSDLPMPDA
ADDGGGDGAGYGDCSNAGAGADGGNAGGGGGGNAGGGGGGGARFMWQDGV
FLRALKDGDWVLLDELNLASQSVLEALNACLDHRAEVFIPELNRTFRCPA
GFRVFAAQNPLGQGGGRKGLPKSFLNRFTRVYVESLTSADMLHIAAARFP
AIAEGRVASCRGDIVSDATAAADELAAAAKTPLRSLSLLMRMIAFNRQSL
PSSSRIQHDTTEARAYGRHGAPWEFNLRDVFRWCELMVVEQGGSGAADAS
KLGGAGGASFSSVKAGTPEMAAATPVPAEEDGLWESLGLFPDVKVTPTEV
TIGSTVLKRGRDASAVSSGMSARLTALPLSLRRPLHALARAVAMGWPALV
VGRRASGKTAVVTALAAAAGMSLRRVAVTPATDVTELLGCFEQV
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mRNA from alignment at P-wetherbeei_contig7735:591..2843-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7735.3.1 ID=mRNA_P-wetherbeei_contig7735.3.1|Name=mRNA_P-wetherbeei_contig7735.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2253bp|location=Sequence derived from alignment at P-wetherbeei_contig7735:591..2843- (Phaeothamnion wetherbeei SAG_119_79)
AGCGCCGTGGCAGAACTGGCGGACCCGATGCTGGACTTTTTGCACTGGTT CAACACGGTCGGCGCGCCGAAGCTCGGAGGCGGCCACAGCCTGTCGCTCT CTTTCCGGGACATTCTGGCGTGGGCCGCCTTCGTCGCTGGCGCCTGCAAG GTTCCGGGAGCCGCCCTCCCGGCGCCGGCAACAGCCCTCGGCGCCGCCGC TGCCCTGCTGCCATGGCAGGCCTTTGTGCACGGCGCGGCGCTCGTCCTGC TGGACGGACTGGGGCTGGGCACGGGCATGTCACGTTACGACGTCGCGCAA CTGCACGCCGTGGCGGCGGAGGCCGTGGTGGCGGCGGTGCCATTCGCCGA ACGCGCCGCCGCGCGGCTGGAGCTTTTCGAAGGCGGCGGCGAGGTGCACG TTATCACGCTGCCCGGCGGCGGCGTCGGCGTGGAAGATGCGCGGAGCGAT GCTGCCGGCGTTGGGGCTGACGGTGTCGATGGTGGCTGGTTTGGCATGGC GCCTTTCCTGATCCGGCGGGGTCCGTTGCCGGCGGCACCGCCGGCGGCCC TGCGCTTCTCGCTCGGCGCGCCAACGACGGCGCGGAACCTGCGGAGGGTG CTGCGCGCGATGCAGCTGCGCAAGGCGGTGCTATTGGAAGGCAGTCCGGG CGTCGGCAAATCGTCGCTCGTGGCAGCGCTGGCGGCGGCGGCGGGCCACC GGCTGGTCCGCATCAACCTGAGCGAGCAGACGGACGTCAGCGATCTCATG GGCAGCGACTTGCCGATGCCGGACGCTGCCGACGACGGCGGCGGCGACGG TGCAGGTTATGGTGACTGCAGTAACGCTGGCGCCGGCGCCGACGGCGGTA ACGCTGGCGGCGGCGGCGGCGGTAACGCTGGCGGCGGCGGCGGCGGTGGT GCGCGCTTCATGTGGCAGGACGGCGTCTTTCTGCGTGCGCTGAAGGACGG CGACTGGGTGCTGCTTGACGAGCTGAACCTGGCGTCTCAGAGCGTGCTCG AGGCACTCAACGCCTGCCTCGATCACCGCGCCGAGGTATTCATCCCCGAG CTCAACCGCACGTTCCGCTGCCCCGCCGGCTTCCGGGTGTTTGCGGCGCA GAACCCCCTGGGGCAGGGCGGCGGCCGCAAAGGCTTGCCCAAAAGCTTCC TGAACCGCTTCACGCGGGTGTACGTCGAGTCGCTGACGTCGGCGGACATG CTGCACATCGCGGCGGCGCGCTTCCCCGCGATTGCGGAGGGGCGGGTGGC GAGCTGCAGGGGTGACATCGTGTCGGATGCCACGGCTGCGGCGGACGAGT TGGCGGCGGCGGCGAAAACACCGCTACGCTCGCTCTCGCTGCTAATGCGC ATGATCGCTTTCAACAGGCAAGTACGAAACAAATATTTATATGATTCATG ATGCGGATTGTTCAGTATGCAGGATTGCACGAGCGATGTCTGATTTTCCC TCATCACTTTTCCCATCTTTAAGTCGCTCCCCTCTAGCAGCCGGATCCAG CACGACACGACCGAGGCGCGCGCCTACGGCCGCCATGGCGCGCCGTGGGA GTTCAACCTGCGTGACGTCTTCCGCTGGTGTGAGCTCATGGTGGTGGAGC AGGGCGGGTCTGGAGCCGCCGACGCTTCCAAGCTGGGCGGCGCCGGCGGC GCGAGCTTCTCATCTGTCAAAGCGGGCACGCCGGAAATGGCGGCGGCGAC GGTGGCGACCGCAGCTGGAACGCTGGCGCCGGCAGCGATGACGGCTCCGG TGTCAGGTTGGTGGCCGGGGCGGCTGGTGGACACCATCTACGTGCAGCGC TTCCGTTCCGAAGGCGATCGGCTCGCCGTGCTGCGTGCTTTCGCTGCGGA CTTTCCGGAGGCGAGCGGCGCCGGCGGCGGAAGCGACGAGGAGCCTGTGC CGGCGGAAGAAGACGGTCTTTGGGAGAGCCTCGGACTCTTCCCGGACGTT AAGGTAACGCCAACGGAAGTCACCATCGGATCGACGGTTCTAAAGCGCGG CAGGGACGCCAGCGCTGTCAGCTCGGGCATGTCTGCGCGGCTGACAGCGT TGCCTTTGTCGCTGCGGCGGCCGCTGCATGCGCTGGCACGGGCCGTGGCG ATGGGCTGGCCCGCGCTGGTGGTGGGGCGGCGGGCGTCGGGCAAGACGGC TGTGGTGACGGCGCTCGCTGCGGCGGCAGGCATGTCGCTGCGGCGGGTAG CGGTCACTCCGGCAACAGACGTGACCGAGCTGCTCGGCTGCTTTGAACAG GTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7735:591..2843-

>mRNA_P-wetherbeei_contig7735.3.1 ID=mRNA_P-wetherbeei_contig7735.3.1|Name=mRNA_P-wetherbeei_contig7735.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1932bp|location=Sequence derived from alignment at P-wetherbeei_contig7735:591..2843- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGACTTTTTGCACTGGTTCAACACGGTCGGCGCGCCGAAGCTCGG
AGGCGGCCACAGCCTGTCGCTCTCTTTCCGGGACATTCTGGCGTGGGCCG
CCTTCGTCGCTGGCGCCTGCAAGGTTCCGGGAGCCGCCCTCCCGGCGCCG
GCAACAGCCCTCGGCGCCGCCGCTGCCCTGCTGCCATGGCAGGCCTTTGT
GCACGGCGCGGCGCTCGTCCTGCTGGACGGACTGGGGCTGGGCACGGGCA
TGTCACGTTACGACGTCGCGCAACTGCACGCCGTGGCGGCGGAGGCCGTG
GTGGCGGCGGTGCCATTCGCCGAACGCGCCGCCGCGCGGCTGGAGCTTTT
CGAAGGCGGCGGCGAGGTGCACGTTATCACGCTGCCCGGCGGCGGCGTCG
GCGTGGAAGATGCGCGGAGCGATGCTGCCGGCGTTGGGGCTGACGGTGTC
GATGGTGGCTGGTTTGGCATGGCGCCTTTCCTGATCCGGCGGGGTCCGTT
GCCGGCGGCACCGCCGGCGGCCCTGCGCTTCTCGCTCGGCGCGCCAACGA
CGGCGCGGAACCTGCGGAGGGTGCTGCGCGCGATGCAGCTGCGCAAGGCG
GTGCTATTGGAAGGCAGTCCGGGCGTCGGCAAATCGTCGCTCGTGGCAGC
GCTGGCGGCGGCGGCGGGCCACCGGCTGGTCCGCATCAACCTGAGCGAGC
AGACGGACGTCAGCGATCTCATGGGCAGCGACTTGCCGATGCCGGACGCT
GCCGACGACGGCGGCGGCGACGGTGCAGGTTATGGTGACTGCAGTAACGC
TGGCGCCGGCGCCGACGGCGGTAACGCTGGCGGCGGCGGCGGCGGTAACG
CTGGCGGCGGCGGCGGCGGTGGTGCGCGCTTCATGTGGCAGGACGGCGTC
TTTCTGCGTGCGCTGAAGGACGGCGACTGGGTGCTGCTTGACGAGCTGAA
CCTGGCGTCTCAGAGCGTGCTCGAGGCACTCAACGCCTGCCTCGATCACC
GCGCCGAGGTATTCATCCCCGAGCTCAACCGCACGTTCCGCTGCCCCGCC
GGCTTCCGGGTGTTTGCGGCGCAGAACCCCCTGGGGCAGGGCGGCGGCCG
CAAAGGCTTGCCCAAAAGCTTCCTGAACCGCTTCACGCGGGTGTACGTCG
AGTCGCTGACGTCGGCGGACATGCTGCACATCGCGGCGGCGCGCTTCCCC
GCGATTGCGGAGGGGCGGGTGGCGAGCTGCAGGGGTGACATCGTGTCGGA
TGCCACGGCTGCGGCGGACGAGTTGGCGGCGGCGGCGAAAACACCGCTAC
GCTCGCTCTCGCTGCTAATGCGCATGATCGCTTTCAACAGGCAATCGCTC
CCCTCTAGCAGCCGGATCCAGCACGACACGACCGAGGCGCGCGCCTACGG
CCGCCATGGCGCGCCGTGGGAGTTCAACCTGCGTGACGTCTTCCGCTGGT
GTGAGCTCATGGTGGTGGAGCAGGGCGGGTCTGGAGCCGCCGACGCTTCC
AAGCTGGGCGGCGCCGGCGGCGCGAGCTTCTCATCTGTCAAAGCGGGCAC
GCCGGAAATGGCGGCGGCGACGCCTGTGCCGGCGGAAGAAGACGGTCTTT
GGGAGAGCCTCGGACTCTTCCCGGACGTTAAGGTAACGCCAACGGAAGTC
ACCATCGGATCGACGGTTCTAAAGCGCGGCAGGGACGCCAGCGCTGTCAG
CTCGGGCATGTCTGCGCGGCTGACAGCGTTGCCTTTGTCGCTGCGGCGGC
CGCTGCATGCGCTGGCACGGGCCGTGGCGATGGGCTGGCCCGCGCTGGTG
GTGGGGCGGCGGGCGTCGGGCAAGACGGCTGTGGTGACGGCGCTCGCTGC
GGCGGCAGGCATGTCGCTGCGGCGGGTAGCGGTCACTCCGGCAACAGACG
TGACCGAGCTGCTCGGCTGCTTTGAACAGGTA
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