mRNA_P-wetherbeei_contig7624.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: D8LI41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI41_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.090e-24 Identity = 72/174 (41.38%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 118 GAYNRALAAHTPS-------GTGQWASYNPLRQGPG---IWVDSSIARADRIAKTYERVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGGVFCALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVREWRWKLDLTEGPERTRRRLLRNYRFFETYDVM 609
G Y AA P G+G + L GP I VD +I RAD IA+TYERV SH RWVW G DDLAW++R+W L L G SLWEGG+F L+ + E + A+ P + G G V R+KLD+ EGPER+R +L N F++TY+VM
Sbjct: 96 GGYGYGAAASGPGSSALSRLGSGVGGALGALAAGPNRKTITVDRAIQRADMIARTYERVATSHGRWVWTGADDLAWASRRWRVQLSGLRGKVSLWEGGLFGRLMCSPEAIT---------------ALRPGTDGGQDG--VDGERYKLDMDEGPERSRLQLRPNRDFYDTYEVM 252
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: A0A6H5KQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH9_9PHAE) HSP 1 Score: 116 bits (291), Expect = 2.370e-24 Identity = 68/154 (44.16%), Postives = 87/154 (56.49%), Query Frame = 1
Query: 157 GTGQWASYNPLRQGPG---IWVDSSIARADRIAKTYERVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGGVFCALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVREWRWKLDLTEGPERTRRRLLRNYRFFETYDVM 609
G+G + L GP I VD +I RAD IA+TYERV SH RWVW G DDLAW++R W L L G SLWEGG+F L+ + E +A A+ P + G G V R+KLD+ EGPER+R +L N F++TY+VM
Sbjct: 3810 GSGVGGALGALAAGPNRKTITVDRAIQRADMIARTYERVATSHGRWVWTGADDLAWASRTWRVQLSGLRGKVSLWEGGLFGRLMCSPEAIA---------------ALRPGTEGGQDG--VDGERYKLDMDEGPERSRLQLRPNRDFYDTYEVM 3946
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: K0R395_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R395_THAOC) HSP 1 Score: 77.0 bits (188), Expect = 2.420e-11 Identity = 51/136 (37.50%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 223 IARADRIAKTYERVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGG--VF---CALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVREWRWKLDLTEGPERTRRRLLRNYRFFETYDVMER 615
+ RA+ ++++ SHS W +G DDL+ A QW L++L G S+WEGG VF C ++A + D M +SSN + RWKLDLTEG ER RRRLL NY F Y++ E+
Sbjct: 1225 LERAELAQRSHDATAESHSLWKRQGFDDLSSGAMQWKFLLRQLKGSCSIWEGGSTVFDESCLFAKSALIASLLQNRSETENAEQD--MAAVSSN------ITVKRWKLDLTEGYERQRRRLLPNYEFHGLYNIDEK 1352
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: A0A7S2Y6C9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6C9_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.670e-10 Identity = 48/137 (35.04%), Postives = 69/137 (50.36%), Query Frame = 1
Query: 223 IARADRIAKTYERVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGGVFCALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVRE-------WRWKLDLTEGPERTRRRLLRNYRFFETYDVME 612
+ RAD + + E+ T H+RW +G DDLA A +W AL+++ G +S+WEGG ++RT E S + + + V E RWKLDL+EG ER RRRLL N+ F Y++ E
Sbjct: 1084 LQRADLLKRCTEKTTEYHNRWKRQGFDDLASGATKWKSALRQMKGAYSIWEGGQV--VVRTKELSLSS-------------YVSVLQQKLETAKLVDEPDVLDFVGRWKLDLSEGFERQRRRLLPNHEFHGLYNLEE 1205
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: A0A7S2E6R0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6R0_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 7.190e-10 Identity = 47/139 (33.81%), Postives = 63/139 (45.32%), Query Frame = 1
Query: 223 IARADRIAKTYERVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGGVF---------CALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVREWRWKLDLTEGPERTRRRLLRNYRFFETYDVME 612
+ RAD ++++ SH+ W +G DDL+ A QW L++L G S+WEGG F C +L + + P N RWKLDLTEG ER RRRLL NY F Y++ E
Sbjct: 807 LERADLAQTSHDKTAESHALWKRQGFDDLSSGAMQWKFLLRQLKGSCSIWEGGYFHVEEDSLFSCTVLMSRITTNFLPFSDVSKKEQIYDEKGPSPDNSDPSAMEIVTRWKLDLTEGYERQRRRLLPNYEFHSLYNLDE 945
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: A0A7S4S7R3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7R3_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 7.590e-10 Identity = 47/139 (33.81%), Postives = 63/139 (45.32%), Query Frame = 1
Query: 223 IARADRIAKTYERVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGGVF---------CALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVREWRWKLDLTEGPERTRRRLLRNYRFFETYDVME 612
+ RAD ++++ SH+ W +G DDL+ A QW L++L G S+WEGG F C +L + + P N RWKLDLTEG ER RRRLL NY F Y++ E
Sbjct: 2654 LERADLAQTSHDKTAESHALWKRQGFDDLSSGAMQWKFLLRQLKGSCSIWEGGYFHVEEDSLFSCTVLMSRITTNFLPFSDVSKKEQIYDEKGPSPDNSDPSAMEIVTRWKLDLTEGYERQRRRLLPNYEFHSLYNLDE 2792
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: A0A7S3Q415_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q415_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.350e-9 Identity = 44/118 (37.29%), Postives = 59/118 (50.00%), Query Frame = 1
Query: 259 RVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGGVFCALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVREWRWKLDLTEGPERTRRRLLRNYRFFETYDVME 612
R +S + W +G+DDL+ A W L++L G SLWEGG + + G R+P GA AM RWKLD+TEG ER R++LL NY F+ Y+V E
Sbjct: 2644 RTENSQAVWKRQGLDDLSSGAMLWKSLLRQLKGSCSLWEGGNQTIAHSLSPEARNKDGSVRSPNGAKSDAM----------------RWKLDVTEGYERQRKKLLPNYEFYSLYNVKE 2745
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: A0A7S1Y5G0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y5G0_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.120e-9 Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 1
Query: 223 IARADRIAKTYERVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGGVFC--------------ALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVREWRWKLDLTEGPERTRRRLLRNYRFFETYDVME 612
+ RA+ + R T SH W +G DDL+ A QW L++L G S+WEGG+ AL+ + +A P + D +V ++ + R WKLDLTEG ER RRR+L NY ++ Y + E
Sbjct: 356 LERAELAQRCTGRTTESHLAWKGQGFDDLSSGATQWKVLLRQLKGSCSIWEGGMILTEEGTPFSKKTLLHALISRDKEMA--------PRKSTDEEVVVVAEKNATEHVTR---WKLDLTEGYERQRRRMLPNYEWYGLYGLDE 488
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: A0A7S1CSU6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CSU6_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.060e-9 Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 1
Query: 223 IARADRIAKTYERVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGGVFC---ALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVREWRWKLDLTEGPERTRRRLLRNYRFFETYDVME 612
+ RA +++ SH+ W +G DDL+ A QW L++L G ++WEGG +L + ++S ++ G + + + +S + SV+ RWKLDLTEG ER RRR+L NY F Y++ E
Sbjct: 1449 LERAALAQRSHGATAESHALWKRQGFDDLSSGAMQWKFLLRQLKGSCTIWEGGSSLNETSLFAKSRLISSLLRKRKDTGDSKEDKSISISGSNE---SVK--RWKLDLTEGYERQRRRMLPNYEFHGLYNIDE 1576
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Match: W7TSW7_9STRA (Wd repeat and fyve domain-containing protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSW7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 7.080e-8 Identity = 52/165 (31.52%), Postives = 81/165 (49.09%), Query Frame = 1
Query: 127 NRALAAHTPS-GTGQWASYNPLRQGPGIWVDSSIARADRIAKTYERVTHSHSRWVWRGIDDLAWSARQWHQALKELWGDHSLWEGGVFCALLRTAEPLASCGGGGRNPGGAFDGAMVPMSSNGSFGRSVRE-WRWKLDLTEGPERTRRRLLRNYRFFETYDVMER 615
+R AA P+ GQ ++++ L +G + + K +E + H + G+ D+A + W + L+ L G S+WEG V + A+ + A V + RS+++ +RWKLDL+EGPER RRRL RNY F E Y+V+ER
Sbjct: 2697 HRLRAAKVPAFSLGQSSAHDRLTRGEHL----------NVRKAFETFINFHQHIIRSGLADIANGSWHWKEVLRSLRGVASVWEG-VDVQEGNDEDRWATAN---------SEAAEVVV-------RSLQQRFRWKLDLSEGPERMRRRLQRNYEFEEVYNVLER 2834 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7624.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7624.2.1 >prot_P-wetherbeei_contig7624.2.1 ID=prot_P-wetherbeei_contig7624.2.1|Name=mRNA_P-wetherbeei_contig7624.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=403bp MAGWAGSGGGSGGGGSTDSPSAKRGSGGGSAGGGGSSGSGAYNRALAAHTback to top mRNA from alignment at P-wetherbeei_contig7624:1092..2548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7624.2.1 ID=mRNA_P-wetherbeei_contig7624.2.1|Name=mRNA_P-wetherbeei_contig7624.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1457bp|location=Sequence derived from alignment at P-wetherbeei_contig7624:1092..2548+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7624:1092..2548+ >mRNA_P-wetherbeei_contig7624.2.1 ID=mRNA_P-wetherbeei_contig7624.2.1|Name=mRNA_P-wetherbeei_contig7624.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig7624:1092..2548+ (Phaeothamnion wetherbeei SAG_119_79)back to top |