mRNA_P-wetherbeei_contig758.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A6H5KG41_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG41_9PHAE) HSP 1 Score: 147 bits (372), Expect = 5.300e-37 Identity = 86/205 (41.95%), Postives = 118/205 (57.56%), Query Frame = 3
Query: 228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRR--APQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
+Y K+ EL + L+ATSGDQGDV MF+EWL R+A L++L +SRP+ LAH ARR+ A++LR+ A Q+V+AL+GG + L+WLD+LGALQ VP+GAHG ASRFALSLLD +R M+ EA ++ QL +RYL++S F ++VVD++GCRDV
Sbjct: 31 EYRKVVELSDNVLVATSGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALIGGWNEVAC------------------------------------------QPELFWLDALGALQDVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 193
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: D7FKH0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH0_ECTSI) HSP 1 Score: 143 bits (361), Expect = 5.910e-32 Identity = 85/205 (41.46%), Postives = 116/205 (56.59%), Query Frame = 3
Query: 228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRR--APQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
+Y K+ EL + L+A SGDQGDV MF+EWL R+A L++L +SRP+ LAH ARR+ A++LR+ A Q+V+ALLGG + L+WLD+LGALQ V +GAHG ASRFALSLLD +R M+ EA ++ QL +RYL++S F ++VVD++GCRDV
Sbjct: 58 EYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVA------------------------------------------WQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 220
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A835ZGL4_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGL4_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.100e-30 Identity = 81/205 (39.51%), Postives = 107/205 (52.20%), Query Frame = 3
Query: 231 YDKISELGERTLIATSGD-QGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRRAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTE-GEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDVG 839
Y K+ +L + A SG QGDV +F++WL R L R+ TS +++ A A LARR A+ LRR P V+ LLGG + A LYWLD +G+LQ +P+GAHG AS F +S+LDK +R D TE +AV ++RD VAQL RYL+ G FQ+ VVD GCRD+G
Sbjct: 5 YKKVVQLDDTLAAAASGPKQGDVEVFVDWLQRVLCLKRM-TSGGLTVSAAASLARRQLAQDLRRRPMDVNMLLGGWDKVRG-------------------------------------------AQLYWLDGMGSLQPIPFGAHGAASSFVISVLDKGHRGDETELRDAVRLMRDCVAQLSTRYLVRGGGFQMMVVDARGCRDIG 165
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A836CPT6_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPT6_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.360e-24 Identity = 71/201 (35.32%), Postives = 99/201 (49.25%), Query Frame = 3
Query: 228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRRAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCR 830
D DKI EL ++A +G Q D +F E++ ++ L L+ +S A A+ RR+ A LR+ P V+ L+GG++ AGA A LYWLD LG LQ V YGA G+ + F LSLLD+ YR M E +AV +VR +A L +R+LI F I+VVD++G R
Sbjct: 31 DLDKIKELDSHKMMALAGPQADCNLFGEYIQKNMALYELNNDLRLSTKAAANYIRRELATALRKGPYQVNMLMGGVD-AGAAA-------------------------------------------LYWLDYLGTLQPVKYGAQGYGAAFTLSLLDRSYRVGMAEADAVELVRSCIAALHKRFLIAQPNFVIKVVDKDGIR 187
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A5J4YZT1_PORPP (Proteasome subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZT1_PORPP) HSP 1 Score: 105 bits (262), Expect = 1.930e-22 Identity = 63/204 (30.88%), Postives = 102/204 (50.00%), Query Frame = 3
Query: 225 QDYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRRAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
+D DKI EL L+ +G+ GDVA F E++ ++ +L +L T S A+A+ R + A+ LR+ P SV+ LLGG + +++LD LG L ++P+ A G+ + F L+ LD+ Y+P+M+E EA+ V+R ++ ++ R+LI F I+VVD+NG R V
Sbjct: 30 EDMDKIMELDRHRLLCMAGEPGDVAQFTEYVQKNVHLYQLRTGVSQSTRAIANFTRNELAKSLRKNPYSVNLLLGGYDQHDGPE-------------------------------------------VFYLDYLGTLHKMPFSAQGYCAYFILATLDRYYKPNMSEQEALEVMRKAIDEVRIRFLIKQPDFLIKVVDKNGIRTV 190
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A0L0HH50_SPIPD (Proteasome subunit beta n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HH50_SPIPD) HSP 1 Score: 105 bits (262), Expect = 2.040e-22 Identity = 60/202 (29.70%), Postives = 101/202 (50.00%), Query Frame = 3
Query: 234 DKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
DK EL + TL+ +G+ GD F E++ R+ L + P+S+HA A+ RR+ AE LR R P VS L+ G +P + LYWLD LGA+ ++ + AHG+AS F +S +D+ ++ D++ EA+++++ +A+L R++ F ++VVD+NG R++
Sbjct: 33 DKSRELNKHTLMLYTGEAGDTVQFAEYIQRNIQLYGIRNGIPLSVHATANFTRRELAESLRSRNPYHVSVLIAGTDPKTG------------------------------------------KPELYWLDYLGAMVKMNFAAHGYASYFCMSTMDRYWKEDLSVEEAISLLKKCIAELKTRFIAQLPEFMVKVVDKNGVREI 192
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A1J5WPC6_9MICR (Proteasome subunit beta n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WPC6_9MICR) HSP 1 Score: 105 bits (262), Expect = 2.760e-22 Identity = 67/204 (32.84%), Postives = 100/204 (49.02%), Query Frame = 3
Query: 225 QDYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRL-STSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCR 830
QD D++ EL L+A GD GD + F E++ L L + R MS+HALA L R+ AE+LR R + L+GG + + LYW+D L A Q+VPY AHG+A+ F S+LD+ Y D+TE EA+ ++R + +L R+L++ G F I+++D+NG R
Sbjct: 30 QDKDRVLELNGNALMALVGDSGDASAFGEYVKAITALEELRNNERKMSVHALASLVRKKLAEELRSRGAYQTNLLVGGCDSHATESLGVVHTPS-----------------------------------LYWIDHLAAAQKVPYAAHGYAAFFCTSILDRAYNEDLTEEEALGLIRLCLDELRTRFLVSQGDFIIKIIDKNGTR 198
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A067N4K4_PLEOS (Proteasome subunit beta n=2 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A067N4K4_PLEOS) HSP 1 Score: 103 bits (257), Expect = 9.590e-22 Identity = 64/205 (31.22%), Postives = 101/205 (49.27%), Query Frame = 3
Query: 228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIE-PAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
D DK+ LG L+A SG+ GD F E+++R+ L + + +S A A RR AE LR R P SV+ LLGG + PA LYW+D LG + VP+GAHG+ S FALSLLD+ + PD + E +A ++ + ++ +R +++ ++ ++VVD++G R++
Sbjct: 31 DEDKVKALGPHLLMAHSGEPGDTLQFAEYVERNIRLYNIRHNYSLSPSAAASWVRRSLAESLRSRHPYSVNLLLGGYDVPA-------------------------------------------KEPHLYWIDYLGTMSEVPFGAHGYGSYFALSLLDRYHNPDASLEEGIATLKRCIDEVAKRLIVSPSKYTVKVVDKDGVREI 192
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: F8NQX0_SERL9 (Proteasome subunit beta n=4 Tax=Agaricomycetidae TaxID=452333 RepID=F8NQX0_SERL9) HSP 1 Score: 103 bits (256), Expect = 1.310e-21 Identity = 64/204 (31.37%), Postives = 102/204 (50.00%), Query Frame = 3
Query: 228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
D DKI E+ L+A SG+ GD F E+++R+ L ++ P+ A A RR A+ LR R+P SV+ L+GG + A LYW+D LG VP+GAHG+ S FALSLLD+ + P+ + E +A ++ V ++ +R +++ GR++++VVD++G R+V
Sbjct: 31 DEDKIKEISPHLLMAYSGEPGDTVQFAEFVERNIRLYQIRNLYPLRPSAAASWIRRSLADSLRSRSPYSVNLLVGGYDTA------------------------------------------THEPKLYWIDYLGTQVDVPFGAHGYGSYFALSLLDRYHDPEASLEEGLATLKRCVDEVAKRLVVSPGRYKVKVVDKDGVREV 192
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A507F6F1_9FUNG (Proteasome subunit beta n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507F6F1_9FUNG) HSP 1 Score: 103 bits (258), Expect = 3.160e-21 Identity = 59/202 (29.21%), Postives = 101/202 (50.00%), Query Frame = 3
Query: 234 DKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
DK EL + TL+ +G+ GD F E++ R+ L + P+S+HA A+ RR+ AE LR R P VS L+ G +P + LYWLD LGA+ ++ + AHG+AS F +S +D+ ++ D++ EA+++++ +A+L R++ F ++VVD++G R++
Sbjct: 97 DKSRELNKHTLMLYTGESGDTVQFAEYIQRNIQLYGIRNGIPLSVHATANFTRRELAESLRSRNPYHVSVLIAGTDPKTG------------------------------------------KPELYWLDYLGAMVKMNFAAHGYASYFCMSTMDRYWKEDLSVEEAISLLKKCIAELKTRFIAQLPEFMVKVVDKDGVREI 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig758.4.2 >prot_P-wetherbeei_contig758.4.2 ID=prot_P-wetherbeei_contig758.4.2|Name=mRNA_P-wetherbeei_contig758.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp MFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRRAPQSVSALLGback to top mRNA from alignment at P-wetherbeei_contig758:4475..6608- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig758.4.2 ID=mRNA_P-wetherbeei_contig758.4.2|Name=mRNA_P-wetherbeei_contig758.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2134bp|location=Sequence derived from alignment at P-wetherbeei_contig758:4475..6608- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig758:4475..6608- >mRNA_P-wetherbeei_contig758.4.2 ID=mRNA_P-wetherbeei_contig758.4.2|Name=mRNA_P-wetherbeei_contig758.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig758:4475..6608- (Phaeothamnion wetherbeei SAG_119_79)back to top |