mRNA_P-wetherbeei_contig7555.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7555.1.1
Unique NamemRNA_P-wetherbeei_contig7555.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A8J9WNV4_9CHLO (Ran-binding protein 10 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNV4_9CHLO)

HSP 1 Score: 179 bits (454), Expect = 6.230e-47
Identity = 103/254 (40.55%), Postives = 145/254 (57.09%), Query Frame = 2
Query:  419 RPEDGDTEA-LPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAF-GSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDL-AEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSLMA 1171
            RPED + E  LP  ++T +  +F+ V  DK+T RYTG+ NH  D G +  NRP+P ++R +Y+EV ++   +                    + +G     F M  QPG +  SYGY G+DG      +GQ +DYGP F AGD +G GI  +RQE+FFT NGKNLGTAF G     L+P +GLH+PGE +  NF    +SPF F L A  E E +++EA A+  + +  G+   +V +YLLH GY +TL +  A
Sbjct:   15 RPEDEEEEEPLPSHFNTNNFGNFLDVEKDKLTVRYTGQGNHNNDVGAIQGNRPVPRKRRVYYYEVTVLDAGSKGL-----------------IGVGFADKNFKMGKQPGWEQHSYGYHGDDGKKF-HASGQGEDYGPHFSAGDVIGAGIHIQRQEIFFTKNGKNLGTAFRGLTQLPLYPTIGLHSPGECIVVNFG---ASPFAFKLDAMLEEEREQQEA-AVQSIPIPAGVTHRLVREYLLHYGYADTLRAFDA 246          
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A836BBQ5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBQ5_9CHLO)

HSP 1 Score: 169 bits (428), Expect = 2.670e-43
Identity = 97/242 (40.08%), Postives = 129/242 (53.31%), Query Frame = 2
Query:  431 GDTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETL 1156
            G  E LP   +T    H +++  DK+T RY G A H  D G + AN P+P     +Y+E+ I+ G  +                   + IG     F +T QPG + GSYGY G+DG      +G  +DYGP FGAGDTVG GI   RQE+FFT NG  L  A   V G L+P +GLH+ GE V+ NF    + PFVFD+    AE +  +  A+ R+ + PG   A+V  YLLH GY +TL
Sbjct:    2 GSLEPLPSALNTARQGHGLELK-DKLTVRYAGDARHNNDVGAIQANHPVPVNCTVYYYELTILDGGISGK-----------------IAIGFADKNFKVTRQPGWEVGSYGYHGDDGKKF-IGSGMGEDYGPTFGAGDTVGAGIHLGRQELFFTKNGTKLKAAHRPVRGGLYPTIGLHSKGEMVQLNFG---AKPFVFDIEGMLAEERAAQRAAVERIPVAPGTSHALVRQYLLHYGYADTL 221          
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A835TEN8_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TEN8_CHLIN)

HSP 1 Score: 168 bits (425), Expect = 6.980e-43
Identity = 96/242 (39.67%), Postives = 129/242 (53.31%), Query Frame = 2
Query:  431 GDTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETL 1156
            G  E LP   ++    H +++  DK+T RY G A H  D G + AN P+P     FY+E+ ++ G  +                   + IG     F +T QPG + GSYGY G+DG      +G  +DYGP FGAGDTVG GI   RQE+FFT NG  L  A   V G L+P +GLH+ GE V+ NF    + PFVFDL    AE +  +  A+ R+ + PG   A+V  YLL+ GY +TL
Sbjct:    2 GSLEPLPSALNSARQGHGLELK-DKLTVRYAGDARHNNDVGAIQANHPVPVNCTVFYYELTVLDGGISGK-----------------IAIGFADKNFKLTRQPGWEVGSYGYHGDDGKKF-IGSGMGEDYGPTFGAGDTVGAGIHLGRQELFFTKNGTKLKAAHRPVRGGLYPTIGLHSKGEMVQLNFG---ARPFVFDLEGMLAEERAAQRAAVERIPVSPGTSHALVRQYLLYHGYADTL 221          
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A7S2DQ84_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DQ84_9EUKA)

HSP 1 Score: 168 bits (425), Expect = 1.270e-42
Identity = 97/253 (38.34%), Postives = 136/253 (53.75%), Query Frame = 2
Query:  425 EDGDTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSLMAESEG 1183
            ED   E LP   DT  H  F+ VS DK+T RY G+ NH+ D G + ++ P P R   +YFEV+ V  A T                  ++ IGL    FP+  QPG +  SY Y G+DG     ++ + + +GP FG+GD +GCG+  ER+E+FFT N  +LG AF  V G L+P +GLH+PGE V  NF    + PF FD+ +     +  + E +   ++    + A+V  YLLH G+ ETL SL    EG
Sbjct:   45 EDDADEPLPTLLDTIDHPRFLAVSKDKLTVRYAGRGNHSQDVGAVRSDWPCPQRCLLYYFEVS-VQDAGTRG----------------SIAIGLADGSFPLNRQPGWEPNSYAYHGHDGRRY-SESERGEHFGPRFGSGDVIGCGLLSERREIFFTKNSVHLGVAFSEVCGLLYPTIGLHSPGELVSVNFG---TEPFAFDVEQLIQVQRNAKCEQMLSSTMPMESIEALVRGYLLHFGFEETLASLEQPGEG 276          
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A2R6XUI5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUI5_MARPO)

HSP 1 Score: 163 bits (413), Expect = 1.720e-41
Identity = 93/256 (36.33%), Postives = 133/256 (51.95%), Query Frame = 2
Query:  419 RPEDG-DTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSLMAESEG 1183
            RPE   + E +P   +TT+  HF+ +S DK++ARY G   H  D G + +NRP P ++  +YFE+++                         ++IG   + F M+ QPG +  SYGY G+DG     + G+ D +GP F  GDTVG GI++  QE+FFT NGK +GT      G L+P +GLH+P E V  NF      PF+FD+     E + R   ++  V L   +   VV  YLLH GY +TL +    S G
Sbjct:   27 RPEPKPEEEEVPTHLNTTTCGHFLVISTDKLSARYNGDGQHGHDVGAIQSNRPAPHQRLLYYFEISLKDRGQRG-----------------VISIGFTDENFKMSRQPGWEPNSYGYHGDDGLLYHGR-GRGDSFGPTFTTGDTVGAGINYAAQELFFTKNGKLVGTHIKEGKGPLYPTIGLHSPSEKVEVNFG---QKPFIFDIEAMVQEERERRQRSVESVPLPLSISHNVVRTYLLHYGYQDTLTAFDVASGG 261          
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: U5DBU3_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5DBU3_AMBTC)

HSP 1 Score: 159 bits (403), Expect = 3.870e-40
Identity = 93/250 (37.20%), Postives = 135/250 (54.00%), Query Frame = 2
Query:  434 DTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSLMAESEG 1183
            D E +P   +T +   F+ VS DK++ +YTG+A H  D G + +N P P+++  +YFE+ +                        +++IG  ++ F M  QPG +  SYGY G+DG  L    G+ D +GP FG GDTVG GI++   E+FFT NG  LG+    V G LFP +G+H+P E V  NF       FVFD+  F AE + ++  A+ +VSL   +   +V  YLLH GY +TL S    S+G
Sbjct:   26 DEEEVPTHLNTMNSCSFLGVSTDKLSIQYTGEALHGHDVGAVQSNCPAPTKRLVYYFEIFVRDAGQKG-----------------SISIGFTNERFKMRRQPGWEANSYGYHGDDGL-LYHGQGKGDAFGPTFGTGDTVGGGINYASNELFFTKNGGFLGSVCKDVKGPLFPTIGVHSPREKVDVNFG---QRRFVFDIEAFAAEERMKQQMAIEKVSLPLSISHWIVRSYLLHYGYQDTLTSFDIASKG 254          
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A2V0P549_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P549_9CHLO)

HSP 1 Score: 160 bits (404), Expect = 5.580e-40
Identity = 112/287 (39.02%), Postives = 142/287 (49.48%), Query Frame = 2
Query:  449 PREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSV--SGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSL------------MAESEGE---AAALRSTAMTRNGVTGGANTAAVA 1258
            P E   T+H   +++  DK+T RYTG   H  D G + ANRP+P++Q  FYFEV I+                        + +G       +T QPG + GSYGY G+DG      +G+ ++YGP FGAGDTVG  +   +QE+FFT NG  L TAF SV  S  L P VGLH+  E V  NF    + PF FDL    AE    EAEA+  V L P      V  YLLH GY  TL +             M+  EGE   AA+L + A  R  +  G   AAVA
Sbjct:    6 PTELSPTAHGPHLELGKDKLTVRYTGDGRH--DVGAIQANRPVPAKQLLFYFEVTILDQGELGK-----------------IGVGFTPKDVKLTRQPGWEPGSYGYHGDDGLRY-SSSGKGEEYGPRFGAGDTVGAALHLGKQEIFFTKNGNKLRTAFSSVRNSPGLVPTVGLHSRNEAVAVNFG---ARPFRFDLEGLLAEEAAAEAEAVDSVPLPPSAAHEAVRSYLLHYGYASTLAAFDAAAGLAGVEQPMSTGEGEDPAAASLPTRAEARRLIMAGDMAAAVA 269          
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: I0YML3_COCSC (SPRY-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YML3_COCSC)

HSP 1 Score: 159 bits (403), Expect = 7.970e-40
Identity = 94/256 (36.72%), Postives = 138/256 (53.91%), Query Frame = 2
Query:  419 RPEDGDTEA-LPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAF-GSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDL-AEFEAEAQRREAEA-----LARVSLDPGLVRAVVLDYLLHQGYIETLNS 1162
            RP+D + E  L   ++T +  +F+ V  DK+T RYTG+  H  D G +  NRP+P ++R +Y+EV ++                        + +G     F M  QPG +  SYGY G+DG     + GQ ++YGP F  GD +G GI  +RQE+FFT NGK+LG AF G     L+P  GLH+PGE +  NF    +SPF F+L A  + E ++ EA +        +S+  G+   +V +YLLH GY +TL +
Sbjct:   15 RPDDDEEEEPLASHFNTNNFGNFLDVEKDKLTVRYTGQGAHNNDVGAIQGNRPVPRKRRVYYYEVTVLDAGEKGL-----------------IGVGFADKNFKMGKQPGWEPHSYGYHGDDGKKF-HQNGQGEEYGPQFTLGDVIGAGIHIQRQEIFFTKNGKHLGVAFRGLPQLPLYPTAGLHSPGECIAVNFG---ASPFAFNLEAMLQEEREQEEAASWVLHCACSISIPAGVTHRLVREYLLHYGYADTLRA 249          
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A7J7CF73_TRIWF (Ran-binding protein 10-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CF73_TRIWF)

HSP 1 Score: 159 bits (402), Expect = 1.360e-39
Identity = 92/247 (37.25%), Postives = 131/247 (53.04%), Query Frame = 2
Query:  425 EDGDTEALPREWDT-TSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNS 1162
            ED   E LP E +T  S   F+ VS DK++ +YT    H  D G + AN+P P ++  +YFE+ + +                       + IG  S+ F M  QPG +  S GY G+DG  L    G+ DD+GP F   DTVG GI++  QE+FFT NG  +GT +  + G LFP V +H+  E +  NF      PF FDL E+EA+ + R+   + ++SL P +   +V  YLLH GY ETL++
Sbjct:   75 EDDGEEELPTELNTINSSGGFLVVSTDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIFVKNAGVKGQ-----------------IAIGFTSESFKMRRQPGWEANSCGYHGDDGH-LYRGQGKGDDFGPTFTTNDTVGGGINYASQEIFFTKNGTIVGTVYKDIKGPLFPTVAVHSQNEEIEVNFG---QRPFAFDLKEYEAQERMRQQMTIEKISLLPNVSHVIVRAYLLHYGYEETLDA 300          
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: R1F2Q0_EMIHU (B30.2/SPRY domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F2Q0_EMIHU)

HSP 1 Score: 152 bits (385), Expect = 2.820e-39
Identity = 92/247 (37.25%), Postives = 127/247 (51.42%), Query Frame = 2
Query:  440 EALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDP-GLVRAVVLDYLLHQGYIETLNSLMAES 1177
            + LP E DT SH  ++  + DK + RY GK NH  D G +  +RP P+R   +YFE  ++                        + IGL  + F +  QPG +  S+GY   DG      + + + YGP +GAGD VGCG+    + +FFT NG++LG AF  V   L+P VGLH+P E V  NF     +PF FD A     A RRE+E  A +   P GLV  +V  YLLH  + +TL +L  +S
Sbjct:   32 QPLPSELDTVSHPRYIIAARDKRSVRYIGKGNHGYDVGAIRTDRPCPARCALYYFEATVLDAGERG-----------------ALCIGLAGESFSLHRQPGWEPDSFGYHAEDGRKY-TDSERGEVYGPAWGAGDVVGCGLVNATRSIFFTRNGQHLGVAFSDVPPQLYPTVGLHSPNEAVALNFG---EAPFAFD-ARGHVAALRRESEQQAALHHAPAGLVAGLVRSYLLHHAFADTLEALERDS 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J9WNV4_9CHLO6.230e-4740.55Ran-binding protein 10 n=1 Tax=Coccomyxa sp. Obi T... [more]
A0A836BBQ5_9CHLO2.670e-4340.08Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A835TEN8_CHLIN6.980e-4339.67Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A7S2DQ84_9EUKA1.270e-4238.34Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A2R6XUI5_MARPO1.720e-4136.33Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
U5DBU3_AMBTC3.870e-4037.20Uncharacterized protein n=2 Tax=Amborella trichopo... [more]
A0A2V0P549_9CHLO5.580e-4039.02Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
I0YML3_COCSC7.970e-4036.72SPRY-domain-containing protein n=1 Tax=Coccomyxa s... [more]
A0A7J7CF73_TRIWF1.360e-3937.25Ran-binding protein 10-like n=1 Tax=Tripterygium w... [more]
R1F2Q0_EMIHU2.820e-3937.25B30.2/SPRY domain-containing protein n=1 Tax=Emili... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7555contigP-wetherbeei_contig7555:679..2893 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog3055.EDP02193
PFAMsCLTH,SPRY
Model size1441
Max annot lvl3041|Chlorophyta
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.29e-45
EggNOG OGsKOG1477@1|root,KOG1477@2759|Eukaryota,37JK6@33090|Viridiplantae,34JH3@3041|Chlorophyta
Ec32 ortholog descriptionSPRY domain
Ec32 orthologEc-10_005110.1
DescriptionSPRY domain
Cds size1164
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186988.071566-UTR-P-wetherbeei_contig7555:678..9551683186988.071566-UTR-P-wetherbeei_contig7555:678..955Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7555 679..955 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186988.081613-CDS-P-wetherbeei_contig7555:955..11681683186988.081613-CDS-P-wetherbeei_contig7555:955..1168Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7555 956..1168 +
1683186988.0903685-CDS-P-wetherbeei_contig7555:1489..19031683186988.0903685-CDS-P-wetherbeei_contig7555:1489..1903Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7555 1490..1903 +
1683186988.1-CDS-P-wetherbeei_contig7555:2124..23581683186988.1-CDS-P-wetherbeei_contig7555:2124..2358Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7555 2125..2358 +
1683186988.1102111-CDS-P-wetherbeei_contig7555:2590..28931683186988.1102111-CDS-P-wetherbeei_contig7555:2590..2893Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7555 2591..2893 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7555.1.1prot_P-wetherbeei_contig7555.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7555 956..2893 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7555.1.1

>prot_P-wetherbeei_contig7555.1.1 ID=prot_P-wetherbeei_contig7555.1.1|Name=mRNA_P-wetherbeei_contig7555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=388bp
MSDDTTLTPWRRRRPCQVVVNAGMLLGGRSASREPFGGAALARASPARPE
DGDTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPL
PSRQRYFYFEVAIVSGAATGGGSGTGGGGSAGGGAGATVTIGLISDGFPM
TLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQ
EVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFD
LAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSLMAES
EGEAAALRSTAMTRNGVTGGANTAAVAAAGMPARGAVAANGTGGVASNGA
SHSIVSLFGGGSGDGGGRSAAGGAIRGSGAPTGGAQTA
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mRNA from alignment at P-wetherbeei_contig7555:679..2893+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7555.1.1 ID=mRNA_P-wetherbeei_contig7555.1.1|Name=mRNA_P-wetherbeei_contig7555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2215bp|location=Sequence derived from alignment at P-wetherbeei_contig7555:679..2893+ (Phaeothamnion wetherbeei SAG_119_79)
TACACGCGTTGTCTGTAAAAAGCTTCGTCCTTTCTCAATTAGGAAGACAC ACTATAACCGAAGAACCGCCGCGCATCGGTTTCCGAGGCGAGCCTGAGGC AGTTCTTCCTTGAGCCCAAATCGCCCCAAGCCCAAGTGCCCAACTGCCTG GGATCGGCGCTGTTGACCGCTATCACGCTCCCCCTTTGATCTCTCCCGAA TTTGGCCTGTTTTTCGTCTCTCGAACCGGTCCTGCACCTGAAGTTTGATC CACGAAAGATTTCGACCCCGATTTCTCATGTCTGACGACACTACACTCAC TCCATGGCGCCGACGCCGTCCTTGTCAGGTTGTTGTCAACGCTGGGATGC TGTTGGGAGGCCGGAGTGCGTCGAGGGAGCCGTTTGGTGGCGCTGCCCTT GCAAGGGCCTCGCCAGCAAGGCCGGAAGATGGCGATACCGAGGCTCTGCC GCGGGAATGGGACACCACGAGCCACGCGCACTTTGTGCAGGTCAGAGGTC TCTACTTTCGAAATTCATGTCTTTTTGAGTCTGTTTAAGTCTCCAGAGGA TCAGCCGCTTGCTGAGAGTCTTTGTTTTGCTTTCCTTGGTCGCTCCCGCA CATTCAGGCGGGCAATGAGTAGAGGGACATCCGTCTTGGATTGGTCTTTC GCTGCCATGCGTCTTTTGTGTTTGGTGGCATACCTCTCAACCGTGTCCAA GTGTCCGTCACCACTCCCTACTGCTGCCGCAACCGCCCATGCCACCGTTA CCCGCCGCGGCCGTCCCTCCGCCGCCGAAATGCTGCTACTCGCCGCCCGC GCCGTCTTCAGGTATCGATCGACAAGGTGACGGCGCGCTACACGGGCAAG GCCAACCATGCGGCCGACTTTGGTACCCTCGGTGCCAACCGGCCACTGCC CTCCCGCCAGCGCTACTTTTACTTCGAGGTTGCCATCGTCAGCGGCGCCG CCACCGGCGGCGGGAGCGGCACCGGCGGCGGTGGCAGCGCCGGCGGCGGC GCTGGTGCGACCGTCACGATCGGGCTGATCAGCGACGGCTTCCCGATGAC GCTGCAACCCGGAGCCGATACCGGCTCCTACGGCTACCGCGGCAACGATG GCTGCTGCCTCGGCCCGAAGGCCGGCCAGCGGGACGACTACGGGCCGCCG TTCGGCGCCGGCGACACGGTCGGCTGCGGCATCGACTTTGAGCGGCAGGA GGTGTTCTTCACGTGTAACGGCAAGGTAACAGACGCTGCGTATTTTTGGG GGGGTTAAGGATCGTGCAACCACAAAGCGCTGGTGAGAAAGACCTGTTGG CTGTCCTCAGACAAGCTGTTGAGCCCTTGAGCTTGCCAAGAAGAGTCTAT AACGTAAGCATTCTTTGTAATGTTGCTCACCCGATCTCCTTGCAGTCACC GTCCTCCCGCCATCTTTTCCCTCTTTCGTCACATTCCCCTCATCAGAACC TCGGGACCGCGTTCGGTAGCGTCAGCGGCGCCCTCTTCCCGGCGGTCGGC CTCCACGCACCGGGCGAGACGGTCCGCGCCAACTTTGCGGGCTCGGCGTC GTCGCCGTTCGTCTTCGACCTGGCCGAGTTCGAGGCGGAGGCGCAGCGAC GAGAGGCGGAGGCGCTGGCACGCGTGTCGCTGGACCCGGGCCTCGTGCGA GCCGTCGTGCTCGACTACCTGCTGCACCAGGTTAGGGCTGCGTGCCGGTC TGAGATTGGGGATAGGAACGGGAAGGGACAACGGGGAAAGTGTTAGGAAT ATTTCTTTCCTCTCTGTTTTAAGACCTTTCTGACGGGTGCGTAGGACTAC TGGGGTTCCTTTTGTCGCCGCATCTTGCTTCTGCTCCTATGTTCGCCTTG TGCGGCGACATATCAATCCTTCATTCTCATCCGATTGGTTCTTTGGTACT CTTATGACGCAGGGCTACATCGAAACCCTCAACAGCCTCATGGCGGAGAG CGAGGGCGAAGCGGCTGCGCTGCGGTCGACGGCAATGACGCGAAACGGCG TCACTGGTGGCGCAAATACAGCGGCAGTGGCAGCGGCTGGCATGCCAGCC AGGGGCGCGGTTGCCGCCAATGGCACCGGCGGCGTCGCCAGCAACGGCGC CAGCCATTCCATTGTGTCGCTGTTCGGCGGCGGCAGCGGTGACGGCGGTG GCCGCTCAGCGGCGGGCGGTGCCATACGAGGATCGGGAGCGCCAACCGGT GGCGCTCAAACGGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7555:679..2893+

>mRNA_P-wetherbeei_contig7555.1.1 ID=mRNA_P-wetherbeei_contig7555.1.1|Name=mRNA_P-wetherbeei_contig7555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1164bp|location=Sequence derived from alignment at P-wetherbeei_contig7555:679..2893+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTGACGACACTACACTCACTCCATGGCGCCGACGCCGTCCTTGTCA
GGTTGTTGTCAACGCTGGGATGCTGTTGGGAGGCCGGAGTGCGTCGAGGG
AGCCGTTTGGTGGCGCTGCCCTTGCAAGGGCCTCGCCAGCAAGGCCGGAA
GATGGCGATACCGAGGCTCTGCCGCGGGAATGGGACACCACGAGCCACGC
GCACTTTGTGCAGGTATCGATCGACAAGGTGACGGCGCGCTACACGGGCA
AGGCCAACCATGCGGCCGACTTTGGTACCCTCGGTGCCAACCGGCCACTG
CCCTCCCGCCAGCGCTACTTTTACTTCGAGGTTGCCATCGTCAGCGGCGC
CGCCACCGGCGGCGGGAGCGGCACCGGCGGCGGTGGCAGCGCCGGCGGCG
GCGCTGGTGCGACCGTCACGATCGGGCTGATCAGCGACGGCTTCCCGATG
ACGCTGCAACCCGGAGCCGATACCGGCTCCTACGGCTACCGCGGCAACGA
TGGCTGCTGCCTCGGCCCGAAGGCCGGCCAGCGGGACGACTACGGGCCGC
CGTTCGGCGCCGGCGACACGGTCGGCTGCGGCATCGACTTTGAGCGGCAG
GAGGTGTTCTTCACGTGTAACGGCAAGAACCTCGGGACCGCGTTCGGTAG
CGTCAGCGGCGCCCTCTTCCCGGCGGTCGGCCTCCACGCACCGGGCGAGA
CGGTCCGCGCCAACTTTGCGGGCTCGGCGTCGTCGCCGTTCGTCTTCGAC
CTGGCCGAGTTCGAGGCGGAGGCGCAGCGACGAGAGGCGGAGGCGCTGGC
ACGCGTGTCGCTGGACCCGGGCCTCGTGCGAGCCGTCGTGCTCGACTACC
TGCTGCACCAGGGCTACATCGAAACCCTCAACAGCCTCATGGCGGAGAGC
GAGGGCGAAGCGGCTGCGCTGCGGTCGACGGCAATGACGCGAAACGGCGT
CACTGGTGGCGCAAATACAGCGGCAGTGGCAGCGGCTGGCATGCCAGCCA
GGGGCGCGGTTGCCGCCAATGGCACCGGCGGCGTCGCCAGCAACGGCGCC
AGCCATTCCATTGTGTCGCTGTTCGGCGGCGGCAGCGGTGACGGCGGTGG
CCGCTCAGCGGCGGGCGGTGCCATACGAGGATCGGGAGCGCCAACCGGTG
GCGCTCAAACGGCA
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