mRNA_P-wetherbeei_contig7503.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7503.1.1
Unique NamemRNA_P-wetherbeei_contig7503.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: A0A521MDK0_9HYPH (DUF1636 domain-containing protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521MDK0_9HYPH)

HSP 1 Score: 218 bits (555), Expect = 4.270e-71
Identity = 108/129 (83.72%), Postives = 113/129 (87.60%), Query Frame = 1 
Query:    1 MDEATVTIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARLRDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPISVSEA 387
            MDEATVTIFVC+SCRRSLGDAEE+FDQPGR L D L+ RL  G Q  V VTPVDCLAVCKRPCTVALAGA KWTYLIGDLDPDSHAEE+V+AALSFAAS NGIV WRERPASFRKGVIARVPPI V  A
Sbjct:    1 MDEATVTIFVCISCRRSLGDAEESFDQPGRDLADALRVRL--GDQTGVAVTPVDCLAVCKRPCTVALAGAGKWTYLIGDLDPDSHAEEVVAAALSFAASENGIVAWRERPASFRKGVIARVPPIMVGNA 127
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BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: A0A085ESF0_9HYPH (Uncharacterized protein n=2 Tax=unclassified Bosea TaxID=2653178 RepID=A0A085ESF0_9HYPH)

HSP 1 Score: 169 bits (428), Expect = 7.100e-52
Identity = 83/125 (66.40%), Postives = 96/125 (76.80%), Query Frame = 1 
Query:    1 MDEATVTIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARL-RDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPI 372
            M E  VTIFVCV+CRR+  D  E +DQPG    + L+ R+ RDGG  ++ V  VDCLAVC RPCTVALA   KWTYLIGDLD D+H +EIV AA SFAAS NGIVPW+ERPASFRKGV+ARVPP+
Sbjct:    1 MPEGDVTIFVCVACRRTRADLPEGYDQPGLSFAEALRERIARDGG--TLPVEAVDCLAVCNRPCTVALAADGKWTYLIGDLDTDTHIDEIVGAAASFAASTNGIVPWKERPASFRKGVVARVPPL 123
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BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: A0A370L878_9HYPH (DUF1636 domain-containing protein n=2 Tax=Bosea TaxID=85413 RepID=A0A370L878_9HYPH)

HSP 1 Score: 165 bits (417), Expect = 3.460e-50
Identity = 78/124 (62.90%), Postives = 95/124 (76.61%), Query Frame = 1 
Query:    1 MDEATVTIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARLRDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPI 372
            M E  +TIFVCV+C+RS  D  E FD+PG  L + L+ R+   G +++ V PVDCLAVC RPCTVA A   KWTYLIGDLD D+H +EIVSAA  +AASANGIV W++RPASFRKGV+ARVPP+
Sbjct:    1 MSEGDLTIFVCVACQRSRADLPEGFDRPGLALAEALRERIALAG-STIPVEPVDCLAVCDRPCTVAFAAGGKWTYLIGDLDTDTHTDEIVSAATHYAASANGIVAWKDRPASFRKGVVARVPPL 123
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BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: A0A8I1R0Y0_9HYPH (DUF1636 domain-containing protein n=1 Tax=Bosea sp. TaxID=1871050 RepID=A0A8I1R0Y0_9HYPH)

HSP 1 Score: 161 bits (407), Expect = 1.120e-48
Identity = 77/124 (62.10%), Postives = 93/124 (75.00%), Query Frame = 1 
Query:    1 MDEATVTIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARLRDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPI 372
            M E  +TI VC +CRR+  D  E +DQPG  L + L A+L   G A + V PV+CLAVCKRPCTVA A   KWTYLIGDLD ++H +EIV AA ++AASANGIVPW+ERP SFRKGV+ARVPP+
Sbjct:    1 MSEGDLTIHVCTACRRARADLPEGYDQPGLALAERLTAQLAAKGSA-IPVLPVECLAVCKRPCTVAFAADGKWTYLIGDLDTETHLDEIVGAAEAYAASANGIVPWKERPQSFRKGVVARVPPL 123
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BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: A0A1D7TZT0_9HYPH (Uncharacterized protein n=3 Tax=Bosea TaxID=85413 RepID=A0A1D7TZT0_9HYPH)

HSP 1 Score: 160 bits (406), Expect = 2.310e-48
Identity = 77/128 (60.16%), Postives = 94/128 (73.44%), Query Frame = 1 
Query:    1 MDEATVTIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARLRDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPISVSE 384
            M EA +TI VC  CRR   D  E +DQPG GL   L  RL   G+A ++V  V+CLAVCKRPCTVA A   KWTYL+GDLD ++H ++IV AA S+AASANGI+PW+ERP  FRKGV+ARVPP+S+ E
Sbjct:    1 MPEADLTIHVCTVCRRVREDLAEGYDQPGLGLATALGERL--AGKAGISVEAVECLAVCKRPCTVAFAANGKWTYLVGDLDAETHLDDIVGAAESYAASANGIIPWKERPTPFRKGVVARVPPLSLRE 126
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BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: UPI000930174E (DUF1636 domain-containing protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000930174E)

HSP 1 Score: 160 bits (405), Expect = 2.390e-48
Identity = 78/127 (61.42%), Postives = 96/127 (75.59%), Query Frame = 1 
Query:    1 MDEATVTIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARLRDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPISVS 381
            M E  VT+FVCVSCRR+  D E  F  PGR LVD LQ RL     A++TVTPV+CLAVC RP T+AL GADKWTYLIG+LD  +H ++IV++A +F  S NGI+PW+ERP +FRKGV+ARVPP+  S
Sbjct:    1 MTETPVTVFVCVSCRRANPDGE-GFHLPGRQLVDALQERL--SSDAAITVTPVECLAVCNRPSTIALVGADKWTYLIGNLDTKTHLDQIVASARAFQESNNGIIPWKERPEAFRKGVVARVPPLGFS 124
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BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: UPI001648E80A (DUF1636 domain-containing protein n=1 Tax=Bosea sp. CS1GBMeth4 TaxID=1892849 RepID=UPI001648E80A)

HSP 1 Score: 159 bits (403), Expect = 9.600e-48
Identity = 77/118 (65.25%), Postives = 88/118 (74.58%), Query Frame = 1 
Query:   19 TIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARLRDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPI 372
            TI VC +CRR   D  E +DQPG  L + L AR+   G   + V PV+CLAVCKRPCT+ALA   KWTYLIGDLD   H +EIV AA SFAASANGIVPW+ERPASFRKGV+ARVPP+
Sbjct:   19 TIHVCTACRRQREDLPEGYDQPGLALAEALGARMTGSG---IAVVPVECLAVCKRPCTIALAADGKWTYLIGDLDAGLHLDEIVGAAESFAASANGIVPWKERPASFRKGVVARVPPL 133
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BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: A0A0Q3KYR0_9HYPH (Predicted metal-binding protein n=9 Tax=Hyphomicrobiales TaxID=356 RepID=A0A0Q3KYR0_9HYPH)

HSP 1 Score: 158 bits (399), Expect = 1.840e-47
Identity = 74/124 (59.68%), Postives = 92/124 (74.19%), Query Frame = 1 
Query:    1 MDEATVTIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARLRDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPI 372
            M E  + I VC +CRR+  D  E +DQPG  L + L  RL   G +++ V PV+CLAVCKRPCT+AL+   KWTYLIGDLD D+H +EIV AA ++A SANGIVPW+ERP SFRKGV+ARVPP+
Sbjct:    1 MSEGDLIIHVCTACRRARADLPEGYDQPGLALAEALAERLLAKG-STIPVVPVECLAVCKRPCTIALSADGKWTYLIGDLDTDTHLDEIVGAAEAYATSANGIVPWKERPQSFRKGVVARVPPL 123
[Close]
BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: A0A2T4YA07_9HYPH (Putative metal-binding protein n=1 Tax=Bosea sp. 124 TaxID=2135642 RepID=A0A2T4YA07_9HYPH)

HSP 1 Score: 158 bits (399), Expect = 1.840e-47
Identity = 74/124 (59.68%), Postives = 90/124 (72.58%), Query Frame = 1 
Query:    1 MDEATVTIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARLRDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPI 372
            M E  +TI VC +CRR   D  + FDQPG  L + L  RL DG    +TV   +CLAVCKRPCT+ALA   KWTYLIGDLD ++H ++IV AA ++AASANGIVPW+ERP  FRKGV+ARVPP+
Sbjct:    1 MSEGDLTIHVCTACRRVREDLPDGFDQPGTALAEALTQRLADGAPG-ITVVTAECLAVCKRPCTIALAADGKWTYLIGDLDTETHLDDIVGAATAYAASANGIVPWKERPPCFRKGVVARVPPM 123
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BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Match: A0A259M9U6_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259M9U6_9PROT)

HSP 1 Score: 157 bits (396), Expect = 6.550e-47
Identity = 84/131 (64.12%), Postives = 96/131 (73.28%), Query Frame = 1 
Query:    1 MDEATVTIFVCVSCRRSLG--DAEEAFDQPGRGLVDTLQARLRDGGQASVTVTPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASANGIVPWRERPASFRKGVIARVPPISVSEA 387
            M E+ V IFVCVSCRR +   DA E  D PG  LV  LQARL       ++V PV+CLAVCKRPCT+ LAG+ +WTYLIGDLD D   EEIV AA S+AAS NGI+PWRERPASFRKGVIARVPP + + A
Sbjct:    1 MSESEVAIFVCVSCRRPVEGRDARED-DLPGPPLVAALQARLA----GEISVVPVECLAVCKRPCTLVLAGSSRWTYLIGDLDSDRDLEEIVEAARSYAASGNGILPWRERPASFRKGVIARVPPRATAAA 126
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7503.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521MDK0_9HYPH4.270e-7183.72DUF1636 domain-containing protein n=1 Tax=Reyranel... [more]
A0A085ESF0_9HYPH7.100e-5266.40Uncharacterized protein n=2 Tax=unclassified Bosea... [more]
A0A370L878_9HYPH3.460e-5062.90DUF1636 domain-containing protein n=2 Tax=Bosea Ta... [more]
A0A8I1R0Y0_9HYPH1.120e-4862.10DUF1636 domain-containing protein n=1 Tax=Bosea sp... [more]
A0A1D7TZT0_9HYPH2.310e-4860.16Uncharacterized protein n=3 Tax=Bosea TaxID=85413 ... [more]
UPI000930174E2.390e-4861.42DUF1636 domain-containing protein n=1 Tax=Hyphomic... [more]
UPI001648E80A9.600e-4865.25DUF1636 domain-containing protein n=1 Tax=Bosea sp... [more]
A0A0Q3KYR0_9HYPH1.840e-4759.68Predicted metal-binding protein n=9 Tax=Hyphomicro... [more]
A0A2T4YA07_9HYPH1.840e-4759.68Putative metal-binding protein n=1 Tax=Bosea sp. 1... [more]
A0A259M9U6_9PROT6.550e-4764.12Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7503contigP-wetherbeei_contig7503:888..1286 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1502851.FG93_06095
PFAMsDUF1636
Model size399
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.16e-52
EggNOG OGsCOG5469@1|root,COG5469@2|Bacteria,1N7P8@1224|Proteobacteria,2UGPN@28211|Alphaproteobacteria,3K04G@41294|Bradyrhizobiaceae
DescriptionProtein of unknown function (DUF1636)
Cds size399
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186985.4582496-CDS-P-wetherbeei_contig7503:887..12861683186985.4582496-CDS-P-wetherbeei_contig7503:887..1286Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7503 888..1286 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7503.1.1prot_P-wetherbeei_contig7503.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7503 888..1286 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7503.1.1

>prot_P-wetherbeei_contig7503.1.1 ID=prot_P-wetherbeei_contig7503.1.1|Name=mRNA_P-wetherbeei_contig7503.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp
MDEATVTIFVCVSCRRSLGDAEEAFDQPGRGLVDTLQARLRDGGQASVTV
TPVDCLAVCKRPCTVALAGADKWTYLIGDLDPDSHAEEIVSAALSFAASA
NGIVPWRERPASFRKGVIARVPPISVSEAVEP*
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mRNA from alignment at P-wetherbeei_contig7503:888..1286-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7503.1.1 ID=mRNA_P-wetherbeei_contig7503.1.1|Name=mRNA_P-wetherbeei_contig7503.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig7503:888..1286- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATGAAGCGACTGTGACAATCTTCGTCTGCGTCTCATGCCGGCGGAG
CCTCGGCGATGCCGAGGAGGCGTTCGACCAGCCCGGCCGCGGCCTGGTCG
ACACGCTGCAGGCACGCCTGCGGGACGGCGGACAGGCAAGCGTCACCGTG
ACGCCGGTCGATTGCCTGGCGGTGTGCAAGCGCCCCTGCACCGTCGCTTT
GGCCGGCGCCGACAAATGGACCTACCTGATCGGGGATCTCGATCCCGACT
CACACGCCGAAGAGATCGTCTCGGCGGCTCTGAGTTTCGCCGCTTCGGCG
AACGGCATCGTTCCCTGGCGGGAACGGCCGGCCTCTTTCCGCAAGGGCGT
GATCGCCCGGGTTCCTCCCATTTCTGTCTCAGAGGCCGTTGAACCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7503:888..1286-

>mRNA_P-wetherbeei_contig7503.1.1 ID=mRNA_P-wetherbeei_contig7503.1.1|Name=mRNA_P-wetherbeei_contig7503.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig7503:888..1286- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATGAAGCGACTGTGACAATCTTCGTCTGCGTCTCATGCCGGCGGAG
CCTCGGCGATGCCGAGGAGGCGTTCGACCAGCCCGGCCGCGGCCTGGTCG
ACACGCTGCAGGCACGCCTGCGGGACGGCGGACAGGCAAGCGTCACCGTG
ACGCCGGTCGATTGCCTGGCGGTGTGCAAGCGCCCCTGCACCGTCGCTTT
GGCCGGCGCCGACAAATGGACCTACCTGATCGGGGATCTCGATCCCGACT
CACACGCCGAAGAGATCGTCTCGGCGGCTCTGAGTTTCGCCGCTTCGGCG
AACGGCATCGTTCCCTGGCGGGAACGGCCGGCCTCTTTCCGCAAGGGCGT
GATCGCCCGGGTTCCTCCCATTTCTGTCTCAGAGGCCGTTGAACCATGA
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