mRNA_P-wetherbeei_contig739.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: A0A835Z007_9STRA (Rho-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z007_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.070e-38 Identity = 80/125 (64.00%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 262 ESAALANLLFYFVHSLDQVVRRPYVLVFCNTDLSWLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADLLQFLPRSVVQEILEEVFGGENPDAAR 636
ES LA LL YFV LD VV YVLVFCNT WL WSR+SFLGQLH LPRR+RKN+QRL++VHPS VLKMFF+FGRLFLS K Y KV +CE VADLL+ LPR V + E VF + P R
Sbjct: 336 ESTELARLLLYFVALLDGVVGGRYVLVFCNTGFDWLSWSRYSFLGQLHGALPRRYRKNLQRLIIVHPSQVLKMFFMFGRLFLSPKVYNKVHFCEHVADLLELLPREAVALLPETVFLHDTPGLTR 460
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: D7FL35_ECTSI (Similar to Rho GTPase activating protein 24 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL35_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 6.610e-16 Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 364 WLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADLLQFLPRSVVQ 588
WL W RFS LG++H+LLPRR++KN++ LVV+ +PVL FF F LFLS KFYRK+ +C+ VA+L P +++
Sbjct: 85 WLSWGRFSMLGEMHSLLPRRYKKNLKGLVVLQHTPVLHSFFEFANLFLSPKFYRKLEFCDGVAELASKFPSEIIE 159
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: A0A0G4GN80_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GN80_VITBC) HSP 1 Score: 91.3 bits (225), Expect = 1.700e-15 Identity = 47/118 (39.83%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 247 DLAQLESAALANLLFYFVHSLDQVVRRPYVLVFCNTDLSWLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADL--LQFLPRSVVQEI 594
D+ +LE A L Y V +LD VV RPYV+V+C+T ++WL S +SF+ H LPR++RKN+ +L VVH + + F F+S KF+ K+ Y ER+ +L + LP + +Q +
Sbjct: 76 DVEELERAFL-----YVVKTLDGVVDRPYVVVYCHTHVNWLSPSLYSFIQSCHTSLPRKYRKNLTQLYVVHATLTFRTLMNFATAFVSSKFFHKIEYIERLGELSYVTGLPAAQLQRL 188
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: A0A7S1U4E7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4E7_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.170e-14 Identity = 39/99 (39.39%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 307 LDQVVRRPYVLVFCNTDLSWLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADLLQF-------LPRSV 582
LD VV + YVL++C+ +++WL R+ F+ +LHA LPR+++KN+ RL+V+H + + ++FF + LF S KF+ K++Y E + L + LPR V
Sbjct: 37 LDAVVEQDYVLIYCHAEMAWLNRDRWGFMKELHAALPRKYKKNLARLLVLHGTFMTRLFFEYASLFASEKFFDKLTYAETIEGLRELTAPDTFELPRRV 135
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: A0A7S1GCE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCE5_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.010e-12 Identity = 38/95 (40.00%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 292 YFVHSLDQVVRRPYVLVFCNTDLSWLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADLLQFLPR 576
Y LD VV R +VLV+ ++ +S + +L ++H++LPR RKN+ +L+V+HP+ LK +F R LS KF+ K++YC++V L + LPR
Sbjct: 63 YLFSVLDDVVERAFVLVYVHSSISKSNTPSYPWLLRIHSMLPRPWRKNLHKLIVLHPAFWLKAALLFMRPKLSKKFWAKLTYCDQVRQLYRALPR 157
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: A0A1A8VUY3_PLAMA (RhoGAP GTPase, putative n=1 Tax=Plasmodium malariae TaxID=5858 RepID=A0A1A8VUY3_PLAMA) HSP 1 Score: 75.5 bits (184), Expect = 1.540e-10 Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 1
Query: 286 LFYFVHSLDQVVRRPYVLVFCNTDLSWLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADLLQFLPRSVVQEIL-----------EEVFGGENP 624
L Y + +LD VV+ YVL+ C T +WL + +++ Q + LPR+++KN++RL +VH + K F+S KF++KV Y E++ DL FL +V I EEV GE P
Sbjct: 68 LRYAIMTLDPVVKENYVLILCETHTNWLNDAVYTYAKQWYDTLPRKYKKNLKRLYLVHSGFLSKTVLTIITPFVSAKFWKKVEYIEKLEDL--FLKLNVNPTIFLRHFPYIVQRNEEVLLGEKP 189
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: A0A1J1GNS0_PLAGA (RhoGAP GTPase, putative n=1 Tax=Plasmodium gallinaceum TaxID=5849 RepID=A0A1J1GNS0_PLAGA) HSP 1 Score: 75.1 bits (183), Expect = 1.970e-10 Identity = 41/122 (33.61%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 286 LFYFVHSLDQVVRRPYVLVFCNTDLSWLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADL---LQFLPRSVVQEIL------EEVFGGENP 624
L Y + +LD +V+ YVL+ C T SWL + +++ Q + LPR+++KN+++L +VH + K F+S KF++KV Y E++ DL L P + ++ EEV GE P
Sbjct: 68 LRYAILTLDPIVKEDYVLILCETHTSWLTDAVYAYAKQWYDTLPRKYKKNLKKLYLVHSGFLSKTLLTMLTPFVSAKFWKKVEYIEKLEDLFLKLNIKPTNYLRHFPYIVQRNEEVMLGEKP 189
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: A0A1J1H3Z1_PLARL (RhoGAP GTPase, putative n=1 Tax=Plasmodium relictum TaxID=85471 RepID=A0A1J1H3Z1_PLARL) HSP 1 Score: 74.7 bits (182), Expect = 2.480e-10 Identity = 41/124 (33.06%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 286 LFYFVHSLDQVVRRPYVLVFCNTDLSWLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADL-----------LQFLPRSVVQEILEEVFGGENP 624
L Y + +LD +V+ YVL+ C T SWL + +++ Q + LPR+++KN+++L +VH + K F+S KF++KV Y E++ DL L++ P V + EEV G+ P
Sbjct: 68 LRYAILTLDPIVKEDYVLILCETHTSWLTDAVYAYAKQWYDTLPRKYKKNLRKLYLVHSGFLSKTLLTILTPFVSAKFWKKVEYIEKLEDLFLKLNVKPTNYLRYFPYIVQRN--EEVMLGKKP 189
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: A0A1Y1JGN1_PLAGO (Rho-GTPase-activating protein 1 n=1 Tax=Plasmodium gonderi TaxID=77519 RepID=A0A1Y1JGN1_PLAGO) HSP 1 Score: 73.6 bits (179), Expect = 6.060e-10 Identity = 39/122 (31.97%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 286 LFYFVHSLDQVVRRPYVLVFCNTDLSWLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADL-----------LQFLPRSVVQEILEEVFGGE 618
L Y + +LD +V+ YVL+ C T +WL + +++ Q + LPR+++KN+++L ++H + K F+S KF++KV Y E++ DL L++ P +VQ E + GGE
Sbjct: 68 LRYSIMTLDPIVKENYVLILCETHTNWLTDAVYAYAKQWYDTLPRKYKKNLKKLYLLHSGFMSKTLLTIVTPFVSAKFWKKVEYIEKLEDLFLKLNVNPTYYLRYFPY-IVQRNEEILLGGE 188
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Match: A0A024W8K8_PLAFA (Uncharacterized protein n=2 Tax=Plasmodium falciparum TaxID=5833 RepID=A0A024W8K8_PLAFA) HSP 1 Score: 72.4 bits (176), Expect = 7.580e-10 Identity = 39/122 (31.97%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 286 LFYFVHSLDQVVRRPYVLVFCNTDLSWLKWSRFSFLGQLHALLPRRHRKNIQRLVVVHPSPVLKMFFVFGRLFLSGKFYRKVSYCERVADL-----------LQFLPRSVVQEILEEVFGGE 618
L Y + +LD +V+ YVL+ C T +WL + +++ Q + LPR+++KN++ L +VH + K F+S KF++KV Y E++ DL L++ P +VQ E + GG+
Sbjct: 54 LRYAILTLDPIVKENYVLILCETHTNWLTDAVYAYAKQWYDTLPRKYKKNLKNLYLVHSGFLSKTLLTIVTPFISPKFWKKVEYIEKLEDLFLKLNIKASKYLKYFPY-IVQRNEEVMLGGQ 174 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig739.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig739.1.1 >prot_P-wetherbeei_contig739.1.1 ID=prot_P-wetherbeei_contig739.1.1|Name=mRNA_P-wetherbeei_contig739.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=681bp VGCGAAAGRAGASAAAALVEGKLKAGAGARLGGRMRRRAGSVGSLTTLAAback to top mRNA from alignment at P-wetherbeei_contig739:106..3532- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig739.1.1 ID=mRNA_P-wetherbeei_contig739.1.1|Name=mRNA_P-wetherbeei_contig739.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3427bp|location=Sequence derived from alignment at P-wetherbeei_contig739:106..3532- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig739:106..3532- >mRNA_P-wetherbeei_contig739.1.1 ID=mRNA_P-wetherbeei_contig739.1.1|Name=mRNA_P-wetherbeei_contig739.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2043bp|location=Sequence derived from alignment at P-wetherbeei_contig739:106..3532- (Phaeothamnion wetherbeei SAG_119_79)back to top |