mRNA_P-wetherbeei_contig7276.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7276.1.1
Unique NamemRNA_P-wetherbeei_contig7276.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: A0A182GYI1_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GYI1_AEDAL)

HSP 1 Score: 188 bits (477), Expect = 8.390e-50
Identity = 108/263 (41.06%), Postives = 146/263 (55.51%), Query Frame = 2
Query:  260 HEALGHPSASVMERMDRLGLIKLRKPF----KLPFCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETC-PAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLG 1033
            H   GH     +  + + G++K  KP      +  C+ C   K  R   ++    R+ ++ ELVHSD+ GP+TP    G KY   F+DD TRF VV+L+R+KDE A   + Y         ++I RLRTDNG EY   E    CK  G IKME + PYT  QNGV+ER  RT  EKAR+ML+ S + R+FWG A+  A +LTN +P TA  LGE   P   +  R+P+ S L+ FG   + H  K+  R KLD K  +G F+G
Sbjct:  320 HRRYGHLGERNLSSLMKAGMVKGMKPCDGDGSMITCEPCMAAKQTRNPFSQREERRSSRVLELVHSDVCGPVTPTGWDGDKYFATFIDDWTRFTVVFLLRSKDEVAGCFKQYEAEMTAKFGVKISRLRTDNGGEYVGKELRSFCKDKG-IKMEYTVPYTPEQNGVAERMNRTLEEKARSMLFDSDVDRSFWGEAVQTAAFLTNRSPATA--LGEKITPFEMWEKRKPDVSKLRVFGSLAYCHIPKER-RRKLDEKTWKGVFIG 578          
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: A0A8D8CFM1_CULPI (Copia protein (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8CFM1_CULPI)

HSP 1 Score: 179 bits (455), Expect = 2.010e-49
Identity = 92/228 (40.35%), Postives = 136/228 (59.65%), Query Frame = 2
Query:  350 FCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLG 1033
            +C+ C   K  R+        R+K++ E+VH+D+ GPI+PA   G +Y + F+DD +RF ++Y M++KD+  +  Q Y         ++I RLR DNG EY +  FE  C+  G I+M+ + PYT  QNGVSER  RT MEKAR+ML+ + +   FWG A+  A YL N +P +A   G+T P   + GR+P+ S ++ +G P + H  K+  R KLD K  +G FLG
Sbjct:    3 YCEPCIEAKQTRKPFEDGPGRRSKRVLEIVHTDVCGPISPAGHDGCRYYVSFIDDWSRFAMLYTMQSKDQVFEYFQLYEAMVTAKFGVKISRLRCDNGGEYHNKNFEEFCRQKG-IQMQFTVPYTPEQNGVSERFNRTAMEKARSMLFDAQVDTKFWGEAVETAAYLVNRSPASAIEEGKT-PFELWEGRKPDVSAMKVWGSPAYCHVPKE-NRKKLDRKTWKGIFLG 227          
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: H3H7I4_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7I4_PHYRM)

HSP 1 Score: 179 bits (454), Expect = 5.670e-49
Identity = 96/234 (41.03%), Postives = 134/234 (57.26%), Query Frame = 2
Query:  350 FCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLGLATKSK 1051
             CD C  GK  R +  K+SP RAK + E+VHSD+ GP+   T  G +Y + F+DD + F VVYL+R K E A K  +++    T    R+Q LR+DNG EY SS     C   G ++   + PYT   NGV+ER  RT ME AR ML  +GLP+ +WG A++ A +L N  PT A +  +  P   ++ ++P  + L+ FGC  +VH  K A RTK D ++ R  FLG +   K
Sbjct:  130 LCDGCALGKQTRVSYMKSSPNRAKHVLEVVHSDVCGPMQTPTFGGKRYFVTFIDDKSHFCVVYLLRNKSEVAAKFAEFVAFAETQTGKRVQTLRSDNGGEYTSSAMAKFCADRGIVQK-FTPPYTPQLNGVAERMNRTLMECARCMLEHAGLPKTYWGEAVMTATFLRNRCPTRA-ISHDKSPHQVWTSKKPLLANLKVFGCHAYVHVPK-AKRTKFDARSVRCRFLGYSEHEK 360          
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: H3H8Y7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8Y7_PHYRM)

HSP 1 Score: 184 bits (466), Expect = 3.200e-48
Identity = 101/248 (40.73%), Postives = 143/248 (57.66%), Query Frame = 2
Query:  308 RLGLIKLRKPFKLPFCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLGLATKSK 1051
            +LG+    K ++L  CD C  GK  R    K+SP RAKQ+ E+VHSD+ GP+   T  G +Y + F+DD + F VVYL+R K E A K  +++    T    R+Q LR+DNG EY S      C   G ++   + PYT   NGV+ER  RT +E AR ML  +GLP+ +WG A++ A +L N  PT A +  +  P   ++G++P  + L+ FGC  +VHE K A RTK D ++ R  FLG +   K
Sbjct:   78 KLGIQAFLKQWEL--CDGCALGKQTRVGYMKSSPNRAKQVLEVVHSDVCGPMQTPTFGGKRYFVTFIDDKSHFCVVYLLRNKSEVAAKFAEFVAFAETQTGKRVQTLRSDNGGEYTSGAMAKFCADRGIVQK-FTPPYTPQLNGVAERMNRTLVECARCMLEHAGLPKTYWGEAVMTATFLRNRCPTRA-ISHDKSPHQVWTGKKPLLANLKVFGCHAYVHEAK-AKRTKFDARSVRCRFLGYSEHEK 320          
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: H3H904_PHYRM (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H904_PHYRM)

HSP 1 Score: 176 bits (447), Expect = 5.080e-48
Identity = 95/234 (40.60%), Postives = 134/234 (57.26%), Query Frame = 2
Query:  350 FCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLGLATKSK 1051
             CD C  GK  R +  K+SP RAKQ+ E+VHSD+ GP+   T  G +Y + F+DD + F VVYL+R K E A K  +++    T    R++ LR+DNG EY S      C   G ++   + PYT   NGV+ER  R  +E AR ML  +GLP+ +WG A++ A +L N  PT A V  +  P   ++G++P  + L+ FGC  +VH  K A RTK D ++ R  FLG +   K
Sbjct:    9 LCDGCALGKQTRVSYMKSSPNRAKQVLEVVHSDVCGPMQTPTFGGKRYFVTFIDDKSHFCVVYLLRNKSEVAAKFAEFVAFAETQTGKRVKTLRSDNGGEYTSGAMAKFCADRGIVQK-FTPPYTPQLNGVAERMNRALVECARCMLEHAGLPKTYWGEAVMTAAFLRNRCPTRA-VSHDKSPHQVWTGKKPLLANLKVFGCHAYVHVPK-AKRTKFDARSVRCRFLGYSEHEK 239          
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: H3H9M8_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9M8_PHYRM)

HSP 1 Score: 180 bits (457), Expect = 1.090e-47
Identity = 97/234 (41.45%), Postives = 136/234 (58.12%), Query Frame = 2
Query:  350 FCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLGLATKSK 1051
             CD C  GK  R +  K+SP RAKQ+ E+VHSD+ GP+   T  G +Y + F+DD + F VVYL+R K E A K  +++    T    R+Q LR+DNG EY S      C  +G ++   + PYT   NGV+ER  RT +E AR ML  +GLP+ +WG A++ A +L N  PT A V  +  P   ++G++P  + L+ FGC  +VH  K A RTK D ++ R  FLG +   K
Sbjct:    9 LCDGCALGKQTRVSYMKSSPNRAKQVLEVVHSDVCGPMQTPTFGGKRYFVTFIDDKSHFCVVYLLRNKSEVAAKFAEFVAFAETQTGKRVQTLRSDNGGEYTSGAMAKFCADHGIVQK-FTPPYTPQLNGVAERMNRTLVECARCMLEHAGLPKTYWGEAVMTAAFLRNRCPTRA-VSHDKSPHQVWTGKKPLLANLKVFGCHAYVHVPK-AKRTKFDARSVRCRFLGYSEHEK 239          
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: H3H8T6_PHYRM (Integrase catalytic domain-containing protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8T6_PHYRM)

HSP 1 Score: 176 bits (446), Expect = 1.550e-47
Identity = 93/234 (39.74%), Postives = 135/234 (57.69%), Query Frame = 2
Query:  350 FCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLGLATKSK 1051
             CD C  GK  R +  K+SP RAK + E+VHSD+ GP+   T  G +Y + F+DD + F +VYL+R K E A K  +++    T    R++ LR+DNG EY S      C  +G ++   + PYT   NGV+ER  RT +E AR ML  +GLP+ +WG A++ A +L N  PT A +  +  P   ++G++P  + L+ FGC  +VH  K A RTK D ++ R  FLG +   K
Sbjct:  159 LCDGCALGKQTRVSYMKSSPNRAKHVLEVVHSDVCGPMQTPTFGGKRYFVTFIDDKSHFCMVYLLRNKSEVAAKFAEFVAFAETQTGKRVKTLRSDNGGEYTSGAMAKFCADHGIVQK-FTPPYTPQLNGVAERMNRTLVECARCMLEHAGLPKTYWGEAVMTATFLRNRCPTRA-ISHDKSPHQVWTGKKPLLANLKVFGCHAYVHVPK-AKRTKFDARSVRCRFLGYSEHEK 389          
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: H3H9F8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9F8_PHYRM)

HSP 1 Score: 179 bits (453), Expect = 1.800e-47
Identity = 96/234 (41.03%), Postives = 135/234 (57.69%), Query Frame = 2
Query:  350 FCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLGLATKSK 1051
             CD C  GK  R +  K+SP RAKQ+ E+VHSD+ GP+   T  G +Y + F+DD + F VVYL+R K E A K  +++    T    R+Q LR+DNG EY S      C   G ++   + PYT   NGV++R  RT +E AR ML  +GLP+ +WG A++ A +L N  PT A V  +  P   ++G++P  + L+ FGC  +VH  K A RTK D ++ R  FLG +   K
Sbjct:    9 LCDGCALGKQTRVSYMKSSPNRAKQVLEVVHSDVCGPMQTPTFGGKRYFVTFIDDKSHFCVVYLLRNKSEVAAKFAEFVAFAETQTGKRVQTLRSDNGGEYTSRAMTKFCADRGIVQK-FTPPYTPQLNGVAKRMNRTLVECARCMLEHAGLPKTYWGEAVMTATFLRNRCPTRA-VSHDKSPHQVWTGKKPLLANLKVFGCHAYVHVPK-AKRTKFDARSVRCRFLGYSEHEK 239          
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: H3H8A1_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8A1_PHYRM)

HSP 1 Score: 178 bits (452), Expect = 2.020e-47
Identity = 96/234 (41.03%), Postives = 134/234 (57.26%), Query Frame = 2
Query:  350 FCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLGLATKSK 1051
             CD C  GK  R +  K+SP RAK + E+VHSD+ GP+   T  G +Y + F+DD + F VVYL+R K E A K  +++    T    R+Q LR+DNG EY S      C   G ++   + PYT   NGV+ER  RT +E AR ML  +GLP+ +WG A++ A +L N  PT A V  +  P   ++G++P  + L+ FGC  +VH  K A RTK D ++ R  FLG +   K
Sbjct:    9 LCDGCALGKQTRVSYMKSSPNRAKHVLEVVHSDVCGPMQTPTFGGKRYFVTFIDDKSHFCVVYLLRNKSEVAAKFAEFVAFAETQTGKRVQTLRSDNGGEYTSGAMAKFCADRGIVQK-FTPPYTPQLNGVAERMNRTLVECARCMLEHAGLPKTYWGEAVVTATFLRNRCPTRA-VSHDKSPHQVWTGKKPLLANLKVFGCHAYVHVPK-AKRTKFDARSVRCRFLGYSEHEK 239          
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Match: H3H9B4_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9B4_PHYRM)

HSP 1 Score: 176 bits (446), Expect = 3.070e-47
Identity = 94/234 (40.17%), Postives = 134/234 (57.26%), Query Frame = 2
Query:  350 FCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGPITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRNLRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWRTEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAFSGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLGLATKSK 1051
             CD C  GK  R +  K+SP RAKQ+ E+VHSD+ GP+   T  G +Y + F+DD + F VVYL+R K E A K  +++    T    R++ LR+DNG EY S      C     ++   + PYT   NGV+ER  RT +E AR ML  +GLP+ +WG A++ A +L N  PT A +  +  P   ++G++P  + L+ FGC  +VH  K A RTK D ++ R  FLG +   K
Sbjct:   82 LCDGCALGKQTRVSYMKSSPNRAKQVLEVVHSDVCGPMQTPTFGGKRYFVTFIDDKSHFCVVYLLRNKSEVAAKFAEFVAFAETQTGKRVKTLRSDNGGEYTSGAMAKFCADRDIVQK-FTPPYTPQLNGVAERMNRTLVECARCMLEHAGLPKTYWGEAVMTATFLRNRCPTRA-ISHDKSPHQVWTGKKPLLANLKVFGCHAYVHVPK-AKRTKFDARSVRCRFLGYSEHEK 312          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7276.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182GYI1_AEDAL8.390e-5041.06Uncharacterized protein n=1 Tax=Aedes albopictus T... [more]
A0A8D8CFM1_CULPI2.010e-4940.35Copia protein (Fragment) n=1 Tax=Culex pipiens Tax... [more]
H3H7I4_PHYRM5.670e-4941.03Integrase catalytic domain-containing protein n=1 ... [more]
H3H8Y7_PHYRM3.200e-4840.73Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H904_PHYRM5.080e-4840.60Integrase catalytic domain-containing protein n=2 ... [more]
H3H9M8_PHYRM1.090e-4741.45Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
H3H8T6_PHYRM1.550e-4739.74Integrase catalytic domain-containing protein n=5 ... [more]
H3H9F8_PHYRM1.800e-4741.03Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H8A1_PHYRM2.020e-4741.03Integrase catalytic domain-containing protein n=1 ... [more]
H3H9B4_PHYRM3.070e-4740.17Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7276contigP-wetherbeei_contig7276:188..1382 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog164328.Phyra87290
PFAMsrve
Model size1195
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.85e-49
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QGWN@4776|Peronosporales
DescriptionIntegrase core domain
Cds size1185
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186969.6165676-CDS-P-wetherbeei_contig7276:187..13721683186969.6165676-CDS-P-wetherbeei_contig7276:187..1372Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7276 188..1372 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186969.6257567-UTR-P-wetherbeei_contig7276:1372..13821683186969.6257567-UTR-P-wetherbeei_contig7276:1372..1382Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7276 1373..1382 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7276.1.1prot_P-wetherbeei_contig7276.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7276 188..1372 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7276.1.1

>prot_P-wetherbeei_contig7276.1.1 ID=prot_P-wetherbeei_contig7276.1.1|Name=mRNA_P-wetherbeei_contig7276.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=395bp
MTDGCGNSVRLGGTDDNLLYLTVVRRMGGQFGRRISSAGKKRQLGVMPGP
APMLILEDAPLSETAGDEQRHAQGLGMSEEQRLHEALGHPSASVMERMDR
LGLIKLRKPFKLPFCDACQYGKSHREAANKNSPERAKQLFELVHSDMLGP
ITPATQSGYKYAIIFVDDLTRFRVVYLMRTKDEAAQKLQDYIGAFVTPRN
LRIQRLRTDNGSEYRSSEFEHICKTNGYIKMECSAPYTQSQNGVSERSWR
TEMEKARTMLYASGLPRNFWGHALLHANYLTNITPTTADVLGETCPAAAF
SGRQPEYSGLQPFGCPVFVHEDKQAGRTKLDPKARRGFFLGLATKSKTSL
IYMPDTKTVLESTHTTFDPAGTRLGEPGSDFTFPETATPLERFMP
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mRNA from alignment at P-wetherbeei_contig7276:188..1382-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7276.1.1 ID=mRNA_P-wetherbeei_contig7276.1.1|Name=mRNA_P-wetherbeei_contig7276.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1195bp|location=Sequence derived from alignment at P-wetherbeei_contig7276:188..1382- (Phaeothamnion wetherbeei SAG_119_79)
TGACAGCCGAATGACTGACGGCTGCGGGAATTCTGTGCGCCTCGGTGGCA CAGACGACAATCTTCTCTACCTGACTGTGGTGAGAAGGATGGGCGGCCAA TTTGGACGACGGATAAGCTCAGCCGGGAAGAAACGGCAATTGGGCGTCAT GCCGGGGCCGGCGCCGATGCTTATTCTGGAGGATGCACCGTTGTCCGAGA CTGCTGGAGATGAGCAGCGACACGCCCAGGGGCTCGGAATGAGCGAAGAA CAGCGCCTGCACGAAGCGCTCGGGCACCCAAGCGCCAGCGTCATGGAACG AATGGACAGGCTGGGCCTGATCAAACTTCGGAAGCCGTTCAAACTTCCGT TCTGCGACGCTTGCCAGTACGGAAAGAGTCACAGGGAGGCAGCCAACAAG AATTCGCCGGAGCGGGCCAAGCAGCTGTTCGAGCTGGTACACAGCGACAT GTTAGGGCCCATCACACCGGCGACGCAAAGCGGCTACAAGTACGCCATCA TCTTCGTTGACGACCTCACGAGATTTCGAGTGGTTTACCTGATGAGGACG AAGGACGAGGCGGCGCAAAAGCTTCAAGACTACATCGGAGCGTTCGTCAC GCCCCGCAACTTGCGGATACAGCGTCTTCGAACGGACAACGGCTCGGAGT ACCGCAGCAGCGAGTTTGAGCACATCTGCAAGACCAACGGCTACATCAAG ATGGAGTGCTCTGCCCCCTATACCCAGTCGCAGAACGGAGTATCGGAGCG GAGCTGGCGGACCGAGATGGAAAAGGCGCGGACGATGCTTTACGCGTCCG GCCTTCCGCGCAACTTCTGGGGGCACGCCCTGCTGCATGCCAACTACCTG ACCAACATCACACCAACAACGGCAGATGTTCTGGGCGAGACCTGCCCAGC CGCGGCTTTCAGCGGCAGACAGCCGGAGTACAGCGGTTTACAACCGTTCG GCTGTCCGGTATTTGTGCATGAGGACAAGCAGGCAGGGCGGACAAAGCTA GACCCCAAAGCGCGAAGGGGCTTCTTCTTGGGCCTGGCGACAAAGAGCAA GACATCTTTGATCTACATGCCTGACACCAAGACGGTTTTGGAATCAACGC ACACGACATTCGACCCTGCCGGCACACGGCTGGGGGAGCCTGGAAGCGAC TTCACTTTTCCTGAAACAGCAACGCCACTGGAGAGATTCATGCCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7276:188..1382-

>mRNA_P-wetherbeei_contig7276.1.1 ID=mRNA_P-wetherbeei_contig7276.1.1|Name=mRNA_P-wetherbeei_contig7276.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig7276:188..1382- (Phaeothamnion wetherbeei SAG_119_79)
ATGACTGACGGCTGCGGGAATTCTGTGCGCCTCGGTGGCACAGACGACAA
TCTTCTCTACCTGACTGTGGTGAGAAGGATGGGCGGCCAATTTGGACGAC
GGATAAGCTCAGCCGGGAAGAAACGGCAATTGGGCGTCATGCCGGGGCCG
GCGCCGATGCTTATTCTGGAGGATGCACCGTTGTCCGAGACTGCTGGAGA
TGAGCAGCGACACGCCCAGGGGCTCGGAATGAGCGAAGAACAGCGCCTGC
ACGAAGCGCTCGGGCACCCAAGCGCCAGCGTCATGGAACGAATGGACAGG
CTGGGCCTGATCAAACTTCGGAAGCCGTTCAAACTTCCGTTCTGCGACGC
TTGCCAGTACGGAAAGAGTCACAGGGAGGCAGCCAACAAGAATTCGCCGG
AGCGGGCCAAGCAGCTGTTCGAGCTGGTACACAGCGACATGTTAGGGCCC
ATCACACCGGCGACGCAAAGCGGCTACAAGTACGCCATCATCTTCGTTGA
CGACCTCACGAGATTTCGAGTGGTTTACCTGATGAGGACGAAGGACGAGG
CGGCGCAAAAGCTTCAAGACTACATCGGAGCGTTCGTCACGCCCCGCAAC
TTGCGGATACAGCGTCTTCGAACGGACAACGGCTCGGAGTACCGCAGCAG
CGAGTTTGAGCACATCTGCAAGACCAACGGCTACATCAAGATGGAGTGCT
CTGCCCCCTATACCCAGTCGCAGAACGGAGTATCGGAGCGGAGCTGGCGG
ACCGAGATGGAAAAGGCGCGGACGATGCTTTACGCGTCCGGCCTTCCGCG
CAACTTCTGGGGGCACGCCCTGCTGCATGCCAACTACCTGACCAACATCA
CACCAACAACGGCAGATGTTCTGGGCGAGACCTGCCCAGCCGCGGCTTTC
AGCGGCAGACAGCCGGAGTACAGCGGTTTACAACCGTTCGGCTGTCCGGT
ATTTGTGCATGAGGACAAGCAGGCAGGGCGGACAAAGCTAGACCCCAAAG
CGCGAAGGGGCTTCTTCTTGGGCCTGGCGACAAAGAGCAAGACATCTTTG
ATCTACATGCCTGACACCAAGACGGTTTTGGAATCAACGCACACGACATT
CGACCCTGCCGGCACACGGCTGGGGGAGCCTGGAAGCGACTTCACTTTTC
CTGAAACAGCAACGCCACTGGAGAGATTCATGCCT
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