prot_P-wetherbeei_contig7212.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7212.2.1
Unique Nameprot_P-wetherbeei_contig7212.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length135
Homology
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: A0A7S2CGJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGJ9_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.590e-43
Identity = 80/117 (68.38%), Postives = 88/117 (75.21%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELSDIER-------MENERADAE-------AANAAKQLAGGH 103
            MRELKVEDALLYLDQVKMEFGD P +YNEFLDIMKNFK+Q+IDTPGVI RVS LFRGYNKLILGFNTFLPDG+KI L DIE        +E +RA AE       +  A K+ A  H
Sbjct:   17 MRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIQRVSQLFRGYNKLILGFNTFLPDGYKIGLEDIEEHHRQSDAIERKRAQAEMEAKMNRSGGARKEAAAAH 133          
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: A0A6H5KLK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK8_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 6.160e-42
Identity = 73/86 (84.88%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELSDIERMENE 86
            MREL+VEDALLYLDQVK+EFGD P +YNEFLDIMKNFK+ +IDTPGVI RVSSLFRGYNKLILGFNTFLPDG+KIELSDIE M  E
Sbjct:    1 MRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRE 86          
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: A0A835ZD67_9STRA (HDAC_interact domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD67_9STRA)

HSP 1 Score: 157 bits (396), Expect = 8.860e-42
Identity = 78/98 (79.59%), Postives = 84/98 (85.71%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELSDIERMENERADAEAANAAKQ 98
            +RELKVEDALLYLDQVKMEFGD P +YNEFLDIMKNFK+Q+IDTPGVI RVS+LFRGYNKLILGFNTFLPDG+KIELSDIE M    A   AA A  Q
Sbjct:   27 LRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQ 124          
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: A0A7R9YDU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDU9_9STRA)

HSP 1 Score: 146 bits (368), Expect = 9.510e-42
Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELSDIERMENER 87
            MRELKVEDAL+YLDQVKMEF   P +YNEFL+IMKNFK+Q IDTPGVI RVS+LFRGYN LILGFNTFLP+G+KIEL DIE++E ER
Sbjct:    4 MRELKVEDALIYLDQVKMEFSSKPEIYNEFLEIMKNFKAQEIDTPGVIRRVSNLFRGYNSLILGFNTFLPEGYKIELKDIEQIERER 90          
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: A0A7S2R609_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R609_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.880e-41
Identity = 74/101 (73.27%), Postives = 83/101 (82.18%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGD---SPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELSDIERMENERADAEAANAAKQ 98
            MRELKVEDALLYLDQVKMEF      P +YNEFL+IMKNFK+Q+IDTPGVI +VS LFRGYNKLILGFNTFLP+G KI+L DIER E+E A  EAA   +Q
Sbjct:   13 MRELKVEDALLYLDQVKMEFQHVQRKPEIYNEFLEIMKNFKAQTIDTPGVIQKVSQLFRGYNKLILGFNTFLPEGHKIKLEDIERNESELAAREAAKLEQQ 113          
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: A0A7S3XUT3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUT3_HETAK)

HSP 1 Score: 142 bits (357), Expect = 3.570e-41
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELS 78
            MRELKVEDALLYLDQVKMEF D P +YNEFLDIMKNFK+Q+IDTPGVI++VS LFRGYNKLILGFNTFLPDG+KIEL+
Sbjct:    9 MRELKVEDALLYLDQVKMEFSDKPEIYNEFLDIMKNFKAQAIDTPGVITKVSRLFRGYNKLILGFNTFLPDGYKIELT 86          
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: D7G0X2_ECTSI (HDAC_interact domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X2_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 5.660e-41
Identity = 79/105 (75.24%), Postives = 89/105 (84.76%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELSDIERM--ENERADAEAANAAKQLAGGH 103
            MREL+VEDALLYLDQVK+EFGD P +YNEFLDIMKNFK+ +IDTPGVI RVSSLFRGYNKLILGFNTFLPDG+KIELSDIE M  E+ER  A +  A+    GG+
Sbjct:    1 MRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHERQLAISRGASVMAGGGN 105          
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: A0A7S4MLJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MLJ2_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.550e-38
Identity = 69/81 (85.19%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELSDIE 81
            MRELKVEDALLYLDQVKMEFGD P +YNEFL+IMKNFK+Q IDTPGVI RVS+LFRGYN LILGFNTFLP+GFKIEL D+E
Sbjct:  335 MRELKVEDALLYLDQVKMEFGDRPRIYNEFLEIMKNFKAQEIDTPGVIRRVSTLFRGYNNLILGFNTFLPEGFKIELKDLE 415          
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: A0A7S4QVT5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QVT5_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.040e-37
Identity = 68/80 (85.00%), Postives = 75/80 (93.75%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELSDI 80
            MRELKVEDALLYLDQVK+EFGD P +YNEFL+IMKNFK+Q IDTPGVISRVS+LFRGYN LILGFNTFLP+GFKIEL D+
Sbjct:  363 MRELKVEDALLYLDQVKLEFGDRPRIYNEFLEIMKNFKAQEIDTPGVISRVSNLFRGYNSLILGFNTFLPEGFKIELKDL 442          
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Match: A0A8J9X5M8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X5M8_PHATR)

HSP 1 Score: 130 bits (328), Expect = 2.940e-37
Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    1 MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISRVSSLFRGYNKLILGFNTFLPDGFKIELSDIE 81
            MR L+VEDALLYLD VK EF   P VYNEFL IMKNFKSQ +DTPGVI+RVS LFRGYNKLILGFNTFLP+G+KI L+D+E
Sbjct:    1 MRGLRVEDALLYLDDVKREFRGRPHVYNEFLGIMKNFKSQEVDTPGVIARVSKLFRGYNKLILGFNTFLPEGYKISLADLE 81          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7212.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2CGJ9_9STRA2.590e-4368.38Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A6H5KLK8_9PHAE6.160e-4284.88Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZD67_9STRA8.860e-4279.59HDAC_interact domain-containing protein n=1 Tax=Tr... [more]
A0A7R9YDU9_9STRA9.510e-4279.31Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2R609_9STRA1.880e-4173.27Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3XUT3_HETAK3.570e-4185.90Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7G0X2_ECTSI5.660e-4175.24HDAC_interact domain-containing protein n=1 Tax=Ec... [more]
A0A7S4MLJ2_9STRA2.550e-3885.19Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S4QVT5_9STRA1.040e-3785.00Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A8J9X5M8_PHATR2.940e-3777.78Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..135
NoneNo IPR availablePANTHERPTHR12346:SF0SIN3A, ISOFORM Gcoord: 2..86
IPR003822Paired amphipathic helixPFAMPF02671PAHcoord: 26..69
e-value: 6.6E-18
score: 64.5
IPR003822Paired amphipathic helixPROSITEPS51477PAHcoord: 2..72
score: 17.741035
IPR036600Paired amphipathic helix superfamilyGENE3D1.20.1160.11Paired amphipathic helixcoord: 8..70
e-value: 3.2E-24
score: 87.1
IPR036600Paired amphipathic helix superfamilySUPERFAMILY47762PAH2 domaincoord: 3..71
IPR039774Transcriptional regulatory protein Sin3-likePANTHERPTHR12346SIN3B-RELATEDcoord: 2..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7212contigP-wetherbeei_contig7212:1954..2857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7212.2.1mRNA_P-wetherbeei_contig7212.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7212 1954..2857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7212.2.1 ID=prot_P-wetherbeei_contig7212.2.1|Name=mRNA_P-wetherbeei_contig7212.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp
MRELKVEDALLYLDQVKMEFGDSPAVYNEFLDIMKNFKSQSIDTPGVISR
VSSLFRGYNKLILGFNTFLPDGFKIELSDIERMENERADAEAANAAKQLA
GGHGGSGGSSGSGGSGGGGGSGGGGSGGGGGSGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003822PAH
IPR036600PAH_sf
IPR039774Sin3-like