mRNA_P-wetherbeei_contig7190.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7190.1.2
Unique NamemRNA_P-wetherbeei_contig7190.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: D8LB55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB55_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 7.450e-112
Identity = 173/261 (66.28%), Postives = 204/261 (78.16%), Query Frame = 1
Query:    1 TEQILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRDVTPCYLCTPTDVHVVPEAAHRAMLANFSSLRPSNIFLRLSPFYWLGNLK----KNALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFYLMQKLL 771
            T +ILNWL+TV+P K + VG+YAYLDGE+HVR+SLAMDAI+KGL E RRDV P YLCTPTDVHV+P AAH A  +   SL   N+  +L+     GNL      N    V G DG   Y+VDGLVNKQGP+YALAKR+QHWRAVV+R+++ C VSSN+APSTATASV SNRLFAMAYGGMH+F PMEVFQQETSNAVMGALLLRD+ D +   P+NP  P+KNPL+LFS+GS HGGVWRMAY IDSIG A+V+ YL+  LL
Sbjct:  262 TPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLT-----GNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPA--TPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLL 515          
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: A0A835Z6A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A9_9STRA)

HSP 1 Score: 323 bits (827), Expect = 2.560e-104
Identity = 164/263 (62.36%), Postives = 201/263 (76.43%), Query Frame = 1
Query:    1 TEQILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRD---VTPCYLCTPTDVHVVPEAAHRAMLANFSSLR-PSNIFLRLSPFYWLGNLKKN--ALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFYLMQKLL 771
            T +IL+WLR+   GK + VGAYAYLDGE+HVRVSLAMDAIIKGL E++     VTP YLCTPTD+HV    A  A   N+S L  P    LRL+P +W G L+ N      V G + T +Y+VDGLVN+QGP+YALAKR+QHWRAVV+R + GC VSSN+APSTATASVT NRLFAMAYGGMHWF PMEVFQQETSNAVMGALLLRD+ D   +  A+P  P+  PL++FS+G+ HGGVWR+ +K+D+IGEA+++ YL+ KLL
Sbjct:  261 TPEILDWLRSTHAGKPLVVGAYAYLDGELHVRVSLAMDAIIKGLTEDKAAHPAVTPAYLCTPTDIHVSTADARAAAAKNYSPLSSPFAALLRLTPLFWFGPLRPNFGGRLTVKGPEET-YYLVDGLVNRQGPNYALAKRMQHWRAVVARARGGCAVSSNIAPSTATASVTHNRLFAMAYGGMHWFRPMEVFQQETSNAVMGALLLRDVSDRRAKG-ASPAVPLSTPLQIFSFGAFHGGVWRLGFKMDTIGEASILMYLLVKLL 521          
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: W7TMF0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF0_9STRA)

HSP 1 Score: 301 bits (770), Expect = 3.960e-95
Identity = 153/254 (60.24%), Postives = 189/254 (74.41%), Query Frame = 1
Query:    1 TEQILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRDVTPCYLCTPTDVHVVPEAAHRAMLANFSSLRPSNIFLRLSPFYWLGN--LKKNALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFYL 756
            T ++  WL  V  GK + VGAYAYLDGE+HV+VSLAMDAII+ L   R+  TP YLCTPTDVHV+ + AH A  A    L   N+  +LS F   G+  L KNAL PV  +DG + Y VDG+V +QGP+YALAKR+QHWRAVV+RE    +VSSN+APSTAT SVTSN+LFA+AY G H+F P+EVFQQETSNAVM A+L+ DI + +   P+NP+  ++NPLELF+YGS+HGG+WRMAYKIDSIGE A   YL
Sbjct:  298 TPELRAWLMGVETGKDLVVGAYAYLDGELHVKVSLAMDAIIRDLTRLRK-ATPAYLCTPTDVHVISKEAHDAAAAQHCELSLVNLVCKLSLFNLPGSGYLVKNALPPVRAEDGEEIYFVDGIVGRQGPNYALAKRIQHWRAVVAREVDKVNVSSNIAPSTATVSVTSNKLFALAYKGFHFFKPLEVFQQETSNAVMAAMLIHDIRNPNV--PSNPKNKIRNPLELFTYGSLHGGIWRMAYKIDSIGEPAAFLYL 548          
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: A0A7R9W5N8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W5N8_9STRA)

HSP 1 Score: 263 bits (671), Expect = 2.140e-83
Identity = 134/252 (53.17%), Postives = 178/252 (70.63%), Query Frame = 1
Query:    1 TEQILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRDVTPCYLCTPTDVHVVPEAAHRAMLANFSSLRPSNIFLRLSPFYWLGN-LKKNALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFY 753
            T  I +WL  + PGK  +VG+YAYLDG +HV+VSLAMDAI + L E+R+D +  YLCTPTD+H+VP+ AH A  A + +     +F  L      G  L+KNA KPV GK G  +Y+++G+   QGP+Y LAKRLQHWRA+V+R   GC VSSN+AP+T+T SV  NR FA AY GM +F P E+F  ++S AVM A+LLRD++D   ++ ANP+  + NP +LFSYGS HGG WR AY++DSIGEA+V+ Y
Sbjct:   72 TPAIRDWLLDLYPGKKFTVGSYAYLDGALHVQVSLAMDAICRDLSEKRKDTSLVYLCTPTDLHLVPKEAHDAAEAEYKNYS-GRLFCMLMRLLSRGKCLRKNARKPVPGKGG-DYYMINGISVAQGPNYILAKRLQHWRAIVARSVAGCTVSSNIAPATSTVSVVHNRTFAWAYEGMPYFKPYEIFAPDSSKAVMLAILLRDLNDP--KSVANPKTELGNPNQLFSYGSFHGGTWRCAYEVDSIGEASVLLY 319          
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: A0A7S2U7B5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7B5_9STRA)

HSP 1 Score: 257 bits (657), Expect = 6.090e-81
Identity = 129/248 (52.02%), Postives = 175/248 (70.56%), Query Frame = 1
Query:   10 ILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRDVTPCYLCTPTDVHVVPEAAHRAMLANFSSLRPSNIFLRLSPFYWLGNLKKNALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFY 753
            I +WL  + PGK  +VG+YAYL+G +HV+VSLAMDAI + L E+R   +  YLCTPTD+H+ P+ A+ A L ++S+       + ++       L+KNA KP++G+ G  +YVV+G+   QGP+YALAKR+QHWRA+V+R  +GC VSSN+APST+TASV  N+ FA AY GM +F P E+F  ETSNAVM A+L  D++D S    ANP   + NP +LF YGS HGG WR AY++DSIGEA+V+ Y
Sbjct:  102 IRDWLLNLYPGKPFTVGSYAYLNGALHVQVSLAMDAICRDLSEKRPGTSLAYLCTPTDLHLCPKEAYDASLEHYSNFSKKPYCILMNLLSGGKFLRKNARKPMSGEGG-DYYVVNGISVAQGPNYALAKRMQHWRAIVARG-NGCIVSSNIAPSTSTASVVQNKTFAWAYEGMPYFTPYEIFAPETSNAVMSAILFSDLNDKSSN--ANPAKKINNPNQLFEYGSFHGGTWRCAYEVDSIGEASVLLY 345          
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: B7FVT1_PHATC (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVT1_PHATC)

HSP 1 Score: 267 bits (683), Expect = 7.770e-81
Identity = 139/272 (51.10%), Postives = 190/272 (69.85%), Query Frame = 1
Query:    1 TEQILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRDVTPCYLCTPTDVHVVPEAAHRAMLANFSSLRPSNIFLRLSPFYWLGNLKKNALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFYLMQKLLVALLALGAAAAVASA 816
            T  I +WL  V PGK+++VG YAYLDG +HV+VSLAMDAI + L E+R++ +  YLCTPTD+H++P+ AH AM AN+ S       + ++       L++N+ KPV+GK G ++Y+V+G+   QGP+YALAKR+QHWRA+ +R + GC VSSN+APST+T SV  NR FA AY GM +F P E+F  ETSNAVM ALL  D++DS     A P   + NP +LFS+GS HGGVWR AY++DSIGE++V+ Y  +     ++A GA AA  +A
Sbjct:  475 TPMIRDWLMNVYPGKSLTVGCYAYLDGALHVQVSLAMDAICRDLSEKRKNTSLAYLCTPTDLHLIPKEAHDAMKANYKSYSGKLYCMMMNLLSGGKFLRQNSKKPVSGKGG-EYYLVNGISVAQGPNYALAKRMQHWRAITARNK-GCIVSSNIAPSTSTVSVVHNRTFAWAYEGMPYFEPFEIFAPETSNAVMSALLFYDLNDSGSW--ATPNTSLGNPNQLFSHGSFHGGVWRCAYEVDSIGESSVLLYFGRVAKPYMVAAGAVAAAGAA 742          
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: B5YMG6_THAPS (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMG6_THAPS)

HSP 1 Score: 263 bits (672), Expect = 6.630e-79
Identity = 132/250 (52.80%), Postives = 184/250 (73.60%), Query Frame = 1
Query:   10 ILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRDVTPCYLCTPTDVHVVPEAAHRAMLANFS--SLRPSNIFLRLSPFYWLGNLKKNALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFY 753
            I +WL  + PGK+ +VG+YAYL+G +HV+VSLAMDAI + L ++R++ +  YLCTPTD+H++P+ AH A  AN+   S +P  +F++L  F+    L+KN  KPV+G  G  FY V+G+   QGP+YALAKR+QHWRAV++R + GC VSSN+APST+T SVT NR FA AY GM +F P E+F  ETSN+VM A+L  D+++   ++ ANP+  + NP +LFS+G+ HGG WR AY+IDSIGEA+V+ Y
Sbjct:  518 IRDWLVDLYPGKSFTVGSYAYLNGALHVQVSLAMDAICRDLCDKRKNTSLAYLCTPTDLHLIPKEAHDAAEANYKEFSKKPFCMFMKL--FFGKKTLRKNVKKPVSGVGG-DFYYVNGISVAQGPNYALAKRMQHWRAVIARSK-GCIVSSNIAPSTSTVSVTQNRTFAWAYEGMPYFKPYEIFAPETSNSVMSAILFNDLNNH--KSIANPDVGIANPNQLFSFGAFHGGTWRCAYEIDSIGEASVLLY 761          
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: A0A1Z5JSJ0_FISSO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSJ0_FISSO)

HSP 1 Score: 258 bits (658), Expect = 3.370e-77
Identity = 135/256 (52.73%), Postives = 181/256 (70.70%), Query Frame = 1
Query:    1 TEQILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRDVTPCYLCTPTDVHVVPEAAHRAMLANFS--SLRPSNIFLRLSPFYWLGN---LKKNALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFY 753
            T  I +WL  + PGK+ +VG+YAYLDG +HV+VSLAMDAI + L E+R++ +  YLCTPTD+H++P+ AH A  AN    S +P  +FL L     LG    L+ N  KPV+GK G  +Y+V+G+   QGP+YALAKR+QHWRA+++R + GC VSSN+APST+T SV  NR FA AY GM +F P E+   + S AVM ALL  D++D S  + ANP+  + NP +LFSYGS HGG+WR AY++DSIGEA+V+ Y
Sbjct:  472 TPLIRDWLLDLYPGKSFTVGSYAYLDGALHVQVSLAMDAITRDLTEKRKNTSLAYLCTPTDLHLIPKEAHDAAAANLKEFSKKPYCMFLSL-----LGGGKFLRSNVKKPVSGKGG-DYYLVNGISVAQGPNYALAKRMQHWRAIIARSK-GCIVSSNIAPSTSTVSVVHNRTFAWAYEGMPYFKPFEIATPDLSKAVMLALLAYDLNDPS--SAANPKTALSNPNQLFSYGSFHGGLWRCAYEVDSIGEASVLLY 718          
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: A0A139AEM4_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AEM4_GONPJ)

HSP 1 Score: 251 bits (642), Expect = 7.830e-77
Identity = 134/253 (52.96%), Postives = 176/253 (69.57%), Query Frame = 1
Query:    1 TEQILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRDVTPCYLCTPTDVHVVPEAAHRAMLANFSSLRPSNIFLRLSPFYWLGNLKKNALKPVAGKDGT-QFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFYL 756
            T +I  W+ +V P K I+VGAYAYLDGE+HV+VSLAMDAII+ +  +R+     YLCTPTDVHV+   A +A   N+SS   + +F       +L  +  N  KPV   DG  +   V+G+V++QGP+YALAKR+QHWRA+V+R + G  VSSN+APST+TASVT NRLFA AYGGMH F PMEVF  ETSNAVM ALL+ D+ + +  + A+P   + NPLELF  GS HGGVWR A+ +++IG  + + YL
Sbjct:  261 TPEIRTWVLSVYPDKHITVGAYAYLDGELHVKVSLAMDAIIRDMTTKRK-AGAAYLCTPTDVHVITSDAAKAERDNYSSFGVATLFK------YLPGMPPNFRKPVKTDDGKKEINYVNGIVDRQGPNYALAKRIQHWRAMVARTE-GSIVSSNIAPSTSTASVTHNRLFAWAYGGMHHFKPMEVFAPETSNAVMAALLINDVRNPN--SVAHPSVTLDNPLELFREGSFHGGVWRTAFPVNAIGTPSAIVYL 503          
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Match: A0A448ZLX2_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLX2_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.730e-76
Identity = 134/253 (52.96%), Postives = 178/253 (70.36%), Query Frame = 1
Query:    1 TEQILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRDVTPCYLCTPTDVHVVPEAAHRAMLANFSSL--RPSNIFLRLSPFYWLGNLKKNALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHVSSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLRDIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVFY 753
            T  I +WL  + PGK+ +VG+YAYL+G +HV+VSLAMDAI + L E+R   +  YLCTPTD+H+VP+ A  A ++NF     R   +F+RL     L  LKKNA  PVAG+ G  FY+++G+   QGP+Y LAKR+QHWRAVV+R + GC VSSN+AP+T+T SVT NR FA AY GM +F P E+F  ETSNAVM A+L  D++  S ++  NP+  + NP +LFS GS HGG WR AY++DSIGE +V+ Y
Sbjct:  366 TPMIRDWLMDLYPGKSFTVGSYAYLNGALHVQVSLAMDAITRDLSEKRPGTSLAYLCTPTDLHLVPKEAWDASVSNFKEYGSRLLCMFVRLLSSGRL--LKKNAKAPVAGEGG-DFYMINGVSVAQGPNYILAKRMQHWRAVVARSK-GCIVSSNIAPATSTVSVTQNRTFAWAYEGMPYFEPYEIFAPETSNAVMSAILFSDLN--SPKSVGNPKTSLNNPNQLFSQGSFHGGNWRCAYEVDSIGETSVLIY 612          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7190.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB55_ECTSI7.450e-11266.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z6A9_9STRA2.560e-10462.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TMF0_9STRA3.960e-9560.24Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7R9W5N8_9STRA2.140e-8353.17Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2U7B5_9STRA6.090e-8152.02Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B7FVT1_PHATC7.770e-8151.10Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
B5YMG6_THAPS6.630e-7952.80Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A1Z5JSJ0_FISSO3.370e-7752.73Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A139AEM4_GONPJ7.830e-7752.96Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
A0A448ZLX2_9STRA6.730e-7652.96Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7190contigP-wetherbeei_contig7190:572..2556 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LB55
Model size831
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.22e-112
EggNOG OGs2A24T@1|root,2RY25@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-27_005150.1
Cds size831
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186964.3397834-CDS-P-wetherbeei_contig7190:571..7541683186964.3397834-CDS-P-wetherbeei_contig7190:571..754Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7190 572..754 -
1683186964.3507664-CDS-P-wetherbeei_contig7190:1007..11221683186964.3507664-CDS-P-wetherbeei_contig7190:1007..1122Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7190 1008..1122 -
1683186964.3598263-CDS-P-wetherbeei_contig7190:1416..15891683186964.3598263-CDS-P-wetherbeei_contig7190:1416..1589Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7190 1417..1589 -
1683186964.368488-CDS-P-wetherbeei_contig7190:1780..19841683186964.368488-CDS-P-wetherbeei_contig7190:1780..1984Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7190 1781..1984 -
1683186964.3770187-CDS-P-wetherbeei_contig7190:2400..25561683186964.3770187-CDS-P-wetherbeei_contig7190:2400..2556Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7190 2401..2556 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7190.1.2prot_P-wetherbeei_contig7190.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7190 572..2556 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7190.1.2

>prot_P-wetherbeei_contig7190.1.2 ID=prot_P-wetherbeei_contig7190.1.2|Name=mRNA_P-wetherbeei_contig7190.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=277bp
TEQILNWLRTVAPGKAISVGAYAYLDGEMHVRVSLAMDAIIKGLVEERRD
VTPCYLCTPTDVHVVPEAAHRAMLANFSSLRPSNIFLRLSPFYWLGNLKK
NALKPVAGKDGTQFYVVDGLVNKQGPSYALAKRLQHWRAVVSREQHGCHV
SSNVAPSTATASVTSNRLFAMAYGGMHWFVPMEVFQQETSNAVMGALLLR
DIHDSSKQNPANPEAPVKNPLELFSYGSMHGGVWRMAYKIDSIGEAAVVF
YLMQKLLVALLALGAAAAVASAAGLF*
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mRNA from alignment at P-wetherbeei_contig7190:572..2556-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7190.1.2 ID=mRNA_P-wetherbeei_contig7190.1.2|Name=mRNA_P-wetherbeei_contig7190.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1985bp|location=Sequence derived from alignment at P-wetherbeei_contig7190:572..2556- (Phaeothamnion wetherbeei SAG_119_79)
ACGGAGCAGATCCTGAACTGGCTGCGGACTGTGGCACCGGGCAAGGCCAT CTCAGTGGGGGCATATGCCTACCTCGATGGCGAGATGCACGTGCGTGTGT CGCTGGCGATGGACGCCATCATCAAGGGGCTTGTCGAGGAGCGCCGCGAC GTCACCGTGAGTAGTGAACTCGGGGCTGAGCTGTCGGCTCGGTTATTTGT TGCTTTTTTCCGAAAGAGAATGGGGAGACGAACAGTTTCGATTGGAGGGT TTTGACGAAGCGGAATGTGTAGGGTATGGCCGGGATACGTGGCGACGGGC GCGTTTTGAACGTGTTTCGCTCGGGCGGCCGGAAGTCAGCTAGCTGTTGG CTGGCTTTTTCTGCCGTGACAGCCGGCGGCGAGTGACACCTGTTTCTGTT ATGATATAGATGTGAATCCTCATCCTTTCTTTTGTCGCCCGTCTTCCTCT ATGCCCCACCTGTCTCTCTCCCACAAAACTGCGCCGGCGAACGAAATCGG GCGAAACGATAACGGAATGTGATGGACTCAAAATGGAAATTGAAACCGGC ACGAAAACGGAAATCACACCAGCCGTGCTACCTGTGCACGCCGACAGACG TGCACGTGGTGCCCGAGGCCGCGCACCGCGCCATGTTGGCCAACTTTTCA TCGCTGCGGCCGAGCAATATCTTCCTCCGGCTGTCGCCCTTCTACTGGCT GGGCAACCTCAAGAAGAACGCGCTCAAGCCCGTCGCCGGGAAGGACGGCA CGCAGTTCTACGTCGTCGACGGCCTCGTGAGTGGGGTTCCATTGGTTTGG CTTTTGGGAGGGAAGCCATTGGGATTTGGGAGCCGTTGTGGAAAGTGCTC GCTTTTAGTCCAGTTATTGATCGGCGCGACGCTGTGGAGGCGACTGGTGC TGCGCGTCATGTGCAAGAGCAACCGGTCGACAACGATTTATTTTCTTCTC TCCCTGAACTCAAACAGGTGAACAAACAGGGCCCGTCGTACGCGCTGGCA AAGCGGCTGCAGCATTGGCGGGCCGTTGTATCACGCGAGCAGCACGGCTG CCACGTGTCATCCAACGTGGCGCCGTCCACCGCCACAGCATCGGTCACCA GCAACCGCCTCTTCGCCATGGCCTACGGCGGCATGCACTGGTTAGGAAGA ACCTGTGGGACTCCCTTTTTTTGGGCGGCTGAAAATGTCAGCACTGTTTT GGTCCGGGATTGGGGCGAATGTTTGCTGTCCTCTTGCGGCAGCTGCCTCA TGCCAAACCTGTGTGCTGCCGAATCCGTCGGTGCCGGCCCTGTCGGTATT TTTGGCTGGCGCCCTCCTTCCCTCCGTCCTTCGTTCACAGTCACTTTCCC ACATTCGCGCTCCTTTCCCCGGTCGATTCTCCCTTCTGTTTTCTTCTGTT TCATCTTGTGCCCAAACCGTGCTGCTTAATGCAGGTTTGTGCCGATGGAG GTGTTCCAGCAAGAGACGTCCAACGCGGTGATGGGGGCGCTGCTGCTGCG CGACATCCACGACTCGAGCAAGCAGAACCCCGCCAACCCCGAGGCACCGG TCAGTCTCCTTGTTTTTCAAGTTTTCTGTTTTTCAGTTTTATCGCTTTCA CTTGTTTCCCTTCAATCGGTCGTTTGGCCTCCTAACTTTCGGGGAACGAC GAGACCGCTAGACCCGTTTTCTTCCTCTGGCAGCCAGGATCCTTTTGTTT TGGCGATTGAGGAGAGAGATGGGCCGTCATTTCTAATAAGTTCTTTTGCG TTCGTATTCAACGCCGCCGCCGCCGCCGCTTCGTCTCTGCCCGCCGCTGC AGGTGAAGAACCCGCTGGAGCTTTTCTCGTACGGGTCGATGCACGGCGGC GTCTGGCGGATGGCATACAAGATCGACTCCATCGGCGAGGCGGCCGTCGT CTTCTACCTCATGCAGAAGCTCCTCGTCGCGCTGCTAGCGCTGGGCGCGG CAGCCGCCGTCGCCTCGGCCGCGGGCCTCTTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7190:572..2556-

>mRNA_P-wetherbeei_contig7190.1.2 ID=mRNA_P-wetherbeei_contig7190.1.2|Name=mRNA_P-wetherbeei_contig7190.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig7190:572..2556- (Phaeothamnion wetherbeei SAG_119_79)
ACGGAGCAGATCCTGAACTGGCTGCGGACTGTGGCACCGGGCAAGGCCAT
CTCAGTGGGGGCATATGCCTACCTCGATGGCGAGATGCACGTGCGTGTGT
CGCTGGCGATGGACGCCATCATCAAGGGGCTTGTCGAGGAGCGCCGCGAC
GTCACCCCGTGCTACCTGTGCACGCCGACAGACGTGCACGTGGTGCCCGA
GGCCGCGCACCGCGCCATGTTGGCCAACTTTTCATCGCTGCGGCCGAGCA
ATATCTTCCTCCGGCTGTCGCCCTTCTACTGGCTGGGCAACCTCAAGAAG
AACGCGCTCAAGCCCGTCGCCGGGAAGGACGGCACGCAGTTCTACGTCGT
CGACGGCCTCGTGAACAAACAGGGCCCGTCGTACGCGCTGGCAAAGCGGC
TGCAGCATTGGCGGGCCGTTGTATCACGCGAGCAGCACGGCTGCCACGTG
TCATCCAACGTGGCGCCGTCCACCGCCACAGCATCGGTCACCAGCAACCG
CCTCTTCGCCATGGCCTACGGCGGCATGCACTGGTTTGTGCCGATGGAGG
TGTTCCAGCAAGAGACGTCCAACGCGGTGATGGGGGCGCTGCTGCTGCGC
GACATCCACGACTCGAGCAAGCAGAACCCCGCCAACCCCGAGGCACCGGT
GAAGAACCCGCTGGAGCTTTTCTCGTACGGGTCGATGCACGGCGGCGTCT
GGCGGATGGCATACAAGATCGACTCCATCGGCGAGGCGGCCGTCGTCTTC
TACCTCATGCAGAAGCTCCTCGTCGCGCTGCTAGCGCTGGGCGCGGCAGC
CGCCGTCGCCTCGGCCGCGGGCCTCTTCTGA
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